scholarly journals The evolution of euAPETALA2 genes in vascular plants: from plesiomorphic roles in sporangia to acquired functions in ovules and fruits

2021 ◽  
Author(s):  
Cecilia Zumajo-Cardona ◽  
Natalia Pabón-Mora ◽  
Barbara A Ambrose
Keyword(s):  
Vascular Plants ◽  
Evolutionary Biology ◽  
Morphological Evolution ◽  
Vascular Plant ◽  
Floral Organ ◽  
Evolutionary Developmental Biology ◽  
Duplication Events ◽  
Spatio Temporal ◽  
Early Diverging Eudicots ◽  
Responsive Element

Abstract The field of evolutionary developmental biology (evo-devo) can help address how morphological novelties evolve, a key question in evolutionary biology. In Arabidopsis thaliana, APETALA2 (AP2) plays a role in the development of key plant innovations including seeds, flowers, and fruits. AP2 belongs to the APETALA2/ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR (AP2/ERF) family which has members in all viridiplantae, making it one of the oldest and most diverse gene lineages. One key subclade, present across vascular plants is the euAPETALA2 (euAP2) clade, whose founding member is AP2. We reconstructed the evolution of the euAP2 gene lineage in vascular plants to better understand its impact on the morphological evolution of plants, identifying seven major duplication events. We also performed spatio-temporal expression analyses of euAP2/TOE3 genes focusing on less explored vascular plant lineages, including ferns, gymnosperms, early diverging angiosperms and early diverging eudicots. Altogether, our data suggest that euAP2 genes originally contributed to spore and sporangium development, and were subsequently recruited to ovule, fruit and floral organ development. Finally, euAP2 protein sequences are highly conserved, therefore, changes in the role of euAP2 during development are most likely due to changes in regulatory regions.

The Intellectual Challenge of Morphological Evolution: A Case for Variational Structuralism

2014 ◽  
Author(s):  
Günter P. Wagner
Keyword(s):  
Developmental Biology ◽  
Evolutionary Biology ◽  
Morphological Evolution ◽  
Evolutionary Developmental Biology ◽  
Phenotypic Evolution ◽  
Developmental Variation ◽  
Core Idea ◽  
Intellectual Challenge

This chapter explores variational structuralism, whose core idea is that organisms and their parts play causal roles in shaping the patterns of phenotypic evolution. Drawing on the work of pioneers such as Ron Amundson, it discusses the conceptual incompatibilities between two styles of thinking in evolutionary biology: functionalism and structuralism. It proceeds by explaining the meaning of developmental types and structuralist concepts arising from macromolecular studies. It also examines facts and ideas about bodies, Rupert Riedl's theory of the “immitatory epigenotype,” and Neil Shubin and Pere Alberch's developmental interpretation of tetrapod limbs. Finally, it looks at the emergence of molecular structuralism and the enigma of developmental variation. The chapter argues that typology naturally emerged from the facts of evolutionary developmental biology and that it would be seriously problematic to try to avoid it.

scholarly journals Molecular Evolution of Genes Controlling Petal and Stamen Development: Duplication and Divergence Within the APETALA3 and PISTILLATA MADS-Box Gene Lineages

Genetics ◽  
1998 ◽  
Vol 149 (2) ◽  
pp. 765-783 ◽  
Author(s):  
Elena M Kramer ◽  
Robert L Dorit ◽  
Vivian F Irish
Keyword(s):  
Morphological Evolution ◽  
Floral Organ ◽  
Duplication Event ◽  
Homeotic Genes ◽  
Mads Box ◽  
Floral Organ Identity ◽  
Organ Identity ◽  
Duplication Events ◽  
Mads Box Gene ◽  
Dicot Species

Abstract The specification of floral organ identity in the higher dicots depends on the function of a limited set of homeotic genes, many of them members of the MADS-box gene family. Two such genes, APETALA3 (AP3) and PISTILLATA (PI), are required for petal and stamen identity in Arabidopsis; their orthologs in Antirrhinum exhibit similar functions. To understand how changes in these genes may have influenced the morphological evolution of petals and stamens, we have cloned twenty-six homologs of the AP3 and PI genes from two higher eudicot and eleven lower eudicot and magnolid dicot species. The sequences of these genes reveal the presence of characteristic PI- and AP3-specific motifs. While the PI-specific motif is found in all of the PI genes characterized to date, the lower eudicot and magnolid dicot AP3 homologs contain distinctly different motifs from those seen in the higher eudicots. An analysis of all the available AP3 and PI sequences uncovers multiple duplication events within each of the two gene lineages. A major duplication event in the AP3 lineage coincides with the base of the higher eudicot radiation and may reflect the evolution of a petal-specific AP3 function in the higher eudicot lineage.

Differentiation of new coenomorph in context of the Belgard’s ecomorph system development

2017 ◽  
Vol 28 (1-2) ◽  
pp. 28-35 ◽  
Author(s):  
B. A. Baranovski
Keyword(s):  
Environmental Factors ◽  
Plant Species ◽  
Vascular Plants ◽  
Deciduous Forest ◽  
System Development ◽  
Vascular Plant ◽  
Tabular Form ◽  
Ecological Scales ◽  
The One ◽  
Different Levels

Nowadays, bioecological characteristics of species are the basis for flora and vegetation studying on the different levels. Bioecological characteristics of species is required in process of flora studying on the different levels such as biotopes or phytocenoses, floras of particular areas (floras of ecologically homogeneous habitats), and floras of certain territories. Ramensky scale is the one of first detailed ecological scales on plant species ordination in relation to various environmental factors; it developed in 1938 (Ramensky, 1971). A little later (1941), Pogrebnyak’s scale of forest stands was proposed. Ellenberg’s system developed in 1950 (Ellenberg, 1979) and Tsyganov’s system (Tsyganov, 1975) are best known as the systems of ecological scales on vascular plant species; these systems represent of habitat detection by ecotopic ecomorphs of plant species (phytoindication). Basically, the system proposed by Alexander Lyutsianovich Belgard was the one of first system of plant species that identiified ectomorphs in relation to environmental factors. As early as 1950, Belgard developed the tabulated system of ecomorphs using the Latin ecomorphs abbreviation; he also used the terminology proposed in the late 19th century by Dekandol (1956) and Warming (1903), as well as terminology of other authors. The article analyzes the features of Belgard’s system of ecomorphs on vascular plants. It has certain significance and advantages over other systems of ecomorphs. The use of abbreviated Latin names of ecomorphs in tabular form enables the use shortened form of ones. In the working scheme of Belgard’s system of ecomorphs relation of species to environmental factors are represented in the abbreviated Latin alphabetic version (Belgard, 1950). Combined into table, the ecomorphic analysis of plant species within association (ecological certification of species), biotope or area site (water area) gives an explicit pattern on ecological structure of flora within surveyed community, biotope or landscape, and on environmental conditions. Development and application by Belgrard the cenomorphs as «species’ adaptation to phytocenosis as a whole» were completely new in the development of systems of ecomorphs and, in this connection, different coenomorphs were distinguished. Like any concept, the system of ecomorphs by Belgard has the possibility and necessity to be developed and added. Long-time researches and analysis of literature sources allow to propose a new coenomorph in the context of Belgard’s system of ecomorphs development: silvomargoant (species of forest margin, from the Latin words margo – edge, boundary (Dvoretsky, 1976), margo – margin, ad margins silvarum – along the deciduous forest margins). As an example of ecomorphic characterization of species according to the system of ecomorphs by Belgard (when the abbreviated Latin ecomorph names are used in tabular form and the proposed cenomorph is used), it was given the part of the table on vascular plants ecomorphs in the National Nature Park «Orelsky» (Baranovsky et al). The Belgard’s system of ecomorphs is particularly convenient and can be successfully applied to data processing in the ecological analysis of the flora on wide areas with significant species richness, and the proposed ecomorph will be another necessary element in the Belgard’s system of ecomorphs. 

In memory of Vera Antonovna Martynenko (1936-2018)

2018 ◽  
pp. 149-154
Keyword(s):  
Vascular Plants ◽  
Ussr Academy ◽  
Vascular Plant ◽  
Plant Cover ◽  
Komi Republic ◽  
Great Contribution ◽  
North East ◽  
The North ◽  
Natural Flora

Vera Antonovna Martynenko (17.02.1936–06.01.2018) — famous specialist in the field of studying vascular plant flora and vegetation of the Far North, the Honored worker of the Komi Republic (2006), The Komi Republic State Scientific Award winner (2000). She was born in the town Likhoslavl of the Kali­nin (Tver) region. In 1959, Vera Antonovna graduated from the faculty of soil and biology of the Leningrad State University and then moved to the Komi Branch of USSR Academy of Science (Syktyvkar). From 1969 to 1973 she passed correspondence postgraduate courses of the Komi Branch of USSR Academy of ­Science. In 1974, she received the degree of candidate of biology (PhD) by the theme «Comparative analysis of the boreal flora at the Northeast European USSR» in the Botanical Institute (St. Petersburg). In 1996, Vera Antonovna received the degree of doctor of biology in the Institute of plant and animal ecology (Ekaterinburg) «Flora of the northern and mid subzones of the taiga of the European North-East». The study and conservation of species and coenotical diversity of the plant world, namely the vascular plants flora of the Komi Republic and revealing its transformation under the anthropogenic influence, was in the field of V. A. Martynenko’ scientific interests. She made great contribution to the study of the Komi Republic meadow flora and the pool of medi­cinal plants. She performed inventorying and mapping the meadows of several agricultural enterprises of the Republic, revealed the species composition and places for harvesting medicinal plants and studied their productivity in the natural flora of the boreal zone. The results of her long-term studies were used for making the NPA system and the Red Book of the Komi Republic (1998 and 2009). Vera Antonovna participated in the research of the influence of placer gold mining and oil development on the natural ecosystems of the North, and developed the method of long-term monitoring of plant cover. Results of these works are of high practical value. V. A. Martynenko is an author and coauthor of more than 130 scientific publications. The most important jnes are «Flora of Northeast European USSR» (1974, 1976, and 1977), «Floristic composition of fodder lands of the Northeast Europe» (1989), «The forests of the Komi Republic» (1999), «Forestry of forest resources of the Komi Republic» (2000), «The list of flora of the Yugyd va national park» (2003), «The guide for vascular plants of the Syktyvkar and its vicinities» (2005), «Vascular plants of the Komi Republic» (2008), and «Resources of the natural flora of the Komi Republic» (2014). She also was an author of «Encyclopedia of the Komi Republic» (1997, 1999, and 2000), «Historical and cultural atlas of the Komi Republic» (1997), «Atlas of the Komi Republic» (2001, 2011). V. A. Martynenko made a great contribution to the development of the botanical investigations in the North. Since 1982, during more than 10 years, she was the head of the Department of the Institute of Biology. Three Ph. D. theses have been completed under her leadership. Many years, she worked actively in the Dissertation Council of the Institute of biology Komi Scientific Centre UrB RAS.  The death of Vera Antonovna Martynenko is a heavy and irretrievable loss for the staff of the Institute of Biology. The memory of Vera Antonovna will live in her numerous scientific works, the hearts of students and colleagues.

Additions and clarifications to the flora of “Castel” nature reserve (the Southern Coast of the Crimea)

2020 ◽  
pp. 112-127
Author(s):  
L. E. Ryff
Keyword(s):  
Vascular Plants ◽  
Nature Reserve ◽  
Vascular Plant ◽  
Field Research ◽  
Southern Coast ◽  
Crimean Peninsula ◽  
Annotated List ◽  
The Crimea ◽  
Protected Natural Area ◽  
Biological Flora

The aim of the work is to supplement and clarify the annotated list of vascular plants of “Castel” nature reserve on the Southern coast of the Crimea. Methods. The work is based on the results of long standing field research, which was carried out by the traditional route-reconnaissance method, analysis of YALT herbarium materials and data from literary and Internet sources. Arealogical and biomorphological characteristics of species are given according to "Biological Flora of the Crimea" by V.N. Golubev, biotope coding according to EUNIS habitat classification. The nomenclature of taxa corresponds to the " Spontaneuos flora of the Crimean peninsula" by A.V. Yena and to international databases Euro+Med PlantBase, The Plant List, Catalog of Life. Results. An additional annotated list of vascular plants of “Castel” nature reserve has been compiled, including 152 species, subspecies and cultivars from 97 genera of 38 families, of which 53 genera and 11 families have also not been cited for this territory before. Arealogical, biomorphological, biotopic and sozological characteristics of the taxa are given. As a result of a critical analysis of the list previously published by E.S. Krainyuk, four species were redefined, two species were proposed to be excluded from the flora of the specially protected natural area, several taxa are considered doubtful. Conclusions. The list of vascular plant taxa in “Castel” nature reserve has been supplemented with 11 families, 53 genera, and 152 species, subspecies, and cultivars; several species from the previously compiled list have been proposed to be excluded or considered doubtful. Thus, the flora of the protected area includes at least 425 species from 68 families. For the first time, the biotopic characteristic of the flora of the reserve was established.

scholarly journals Where we Come from and where to Go: Six Decades of Botanical Studies in the Mediterranean Wetlands, with Sardinia (Italy) as a Case Study

Wetlands ◽  
2021 ◽  
Vol 41 (6) ◽  
Author(s):  
Alba Cuena-Lombraña ◽  
Mauro Fois ◽  
Annalena Cogoni ◽  
Gianluigi Bacchetta
Keyword(s):  
Vascular Plants ◽  
Vascular Plant ◽  
Regional Scale ◽  
Temporary Ponds ◽  
Evolutionary Strategies ◽  
Plant Groups ◽  
Research Themes ◽  
The Mediterranean ◽  
Taxonomic Groups ◽  
Water Saturated

AbstractPlants are key elements of wetlands due to their evolutionary strategies for coping with life in a water-saturated environment, providing the basis for supporting nearly all wetland biota and habitat structure for other taxonomic groups. Sardinia, the second largest island of the Mediterranean Basin, hosts a great variety of wetlands, of which 16 are included in eight Ramsar sites. The 119 hydro- and hygrophilous vascular plant taxa from Sardinia represent the 42.6% and 37.9% of the number estimated for Italy and Europe, respectively. Moreover, around 30% of Sardinia’s bryological flora, which is made up of 498 taxa, is present in temporary ponds. An overview at regional scale considering algae is not available, to our knowledge, even though several specific studies have contributed to their knowledge. In order to find the most investigated research themes and wetland types, identify knowledge gaps and suggest recommendations for further research, we present a first attempt to outline the work that has been hitherto done on plants in lentic habitats in Sardinia. Three plant groups (algae, bryophytes and vascular plants), and five research themes (conservation, ecology, inventory, palaeobotany and taxonomy) were considered. After a literature review, we retained 202 papers published from 1960 to 2019. We found that studies on vascular plants, as plant group, were disproportionately more numerous, and inventories and ecology were the most investigated research themes. Although efforts have recently been made to fill these long-lasting gaps, there is a need for updating the existing information through innovative methods and integrative approaches.

scholarly journals Carbon for nutrient exchange between Lycopodiella inundata and Mucoromycotina fine root endophytes is unresponsive to high atmospheric CO2

Mycorrhiza ◽  
2021 ◽  
Author(s):  
Grace A. Hoysted ◽  
Jill Kowal ◽  
Silvia Pressel ◽  
Jeffrey G. Duckett ◽  
Martin I. Bidartondo ◽  
...  
Keyword(s):  
Vascular Plants ◽  
Fine Root ◽  
Vascular Plant ◽  
Arbuscular Mycorrhizal ◽  
Root Endophyte ◽  
Isotope Tracers ◽  
The Past ◽  
Fungal Associates ◽  
Endophyte Fungi

AbstractNon-vascular plants associating with arbuscular mycorrhizal (AMF) and Mucoromycotina ‘fine root endophyte’ (MFRE) fungi derive greater benefits from their fungal associates under higher atmospheric [CO2] (a[CO2]) than ambient; however, nothing is known about how changes in a[CO2] affect MFRE function in vascular plants. We measured movement of phosphorus (P), nitrogen (N) and carbon (C) between the lycophyte Lycopodiella inundata and Mucoromycotina fine root endophyte fungi using 33P-orthophosphate, 15 N-ammonium chloride and 14CO2 isotope tracers under ambient and elevated a[CO2] concentrations of 440 and 800 ppm, respectively. Transfers of 33P and 15 N from MFRE to plants were unaffected by changes in a[CO2]. There was a slight increase in C transfer from plants to MFRE under elevated a[CO2]. Our results demonstrate that the exchange of C-for-nutrients between a vascular plant and Mucoromycotina FRE is largely unaffected by changes in a[CO2]. Unravelling the role of MFRE in host plant nutrition and potential C-for-N trade changes between symbionts under different abiotic conditions is imperative to further our understanding of the past, present and future roles of plant-fungal symbioses in ecosystems.

scholarly journals The flora of Cunningham Inlet, Somerset Island, Nunavut: history, analysis, and new collections of vascular plants, mosses, lichens, and algae

2015 ◽  
Vol 129 (1) ◽  
pp. 24 ◽  
Author(s):  
Paul C. Sokoloff
Keyword(s):  
Vascular Plants ◽  
Vascular Plant ◽  
North Coast ◽  
University Of Alberta ◽  
Comprehensive Account ◽  
The North ◽  
National Herbarium ◽  
History Analysis ◽  
Somerset Island ◽  
First Time

New collections of vascular plants, bryophytes, lichen, and algae are reported for Cunningham Inlet on the north coast of Somerset Island, Nunavut. This list of 48 species of vascular plants, 13 bryophytes, 10 lichens, and five algae includes 136 specimens collected in 2013 and 39 previously unreported specimens from the National Herbarium of Canada at the Canadian Museum of Nature (CAN), Agriculture and Agri-Food Canada’s Vascular Plant Herbarium (DAO), and University of Alberta (ALTA). Ten vascular plants from previous collecting in 1958 are re-reported here to give a comprehensive account of the vascular plant flora of the region. Two vascular plants are recorded for the first time for Somerset Island: Smooth Draba (Draba glabella Pursh) and Edlund’s Fescue (Festuca edlundiae S. G. Aiken, Consaul & Lefkovitch).

Return of the megaherbs: plant colonisation of derelict ANARE station buildings on sub-Antarctic Heard Island

Polar Record ◽  
2004 ◽  
Vol 40 (3) ◽  
pp. 235-243 ◽  
Author(s):  
J. Whinam ◽  
P.M. Selkirk ◽  
A.J. Downing ◽  
Bruce Hull
Keyword(s):  
Plant Species ◽  
Vascular Plants ◽  
Vascular Plant ◽  
Water Tank ◽  
Moss Species ◽  
Left Behind ◽  
Plant Colonisation ◽  
Vascular Plant Species ◽  
Heard Island ◽  
Antarctic Research

Buildings were constructed and artefacts left behind on sub-Antarctic Heard Island, associated with Antarctic research expeditions since 1926. Both bryophytes and vascular plants are colonising many parts of the now derelict buildings. On these structures and artefacts, the authors recorded four species of vascular plants out of the 11 that occur on Heard Island and nine species of mosses out of the 37 recorded from Heard Island. The vascular plant species most frequently recorded colonising structures and artefacts was Pringlea antiscorbutica (288 occurrences), with the area colonised varying from 0.3 cm2 to 430.0 cm2. Muelleriella crassifolia was the moss species that was most frequently recorded (14 occurrences), colonising areas from 2.1 cm2 to 12.9 cm2. The highest number of bryophyte species (seven) was recorded on the stone and cement of the ‘water tank.’ Pringlea antiscorbutica, Poa cookii, Azorella selago, Muelleriella crassifolia, Bryum dichotomum, Dicranoweisia brevipes and Schistidium apocarpum are all expected to continue to colonise the ANARE ruins, as well as areas that have become available since building removal and also possibly areas bared by further deglaciation.

scholarly journals The Cardamine hirsuta genome offers insight into the evolution of morphological diversity

Nature Plants ◽  
2016 ◽  
Vol 2 (11) ◽  
Author(s):  
Xiangchao Gan ◽  
Angela Hay ◽  
Michiel Kwantes ◽  
Georg Haberer ◽  
Asis Hallab ◽  
...  
Keyword(s):  
Evolutionary Biology ◽  
Human Genetics ◽  
Morphological Evolution ◽  
Morphological Diversity ◽  
Close Relative ◽  
Gene Duplications ◽  
Tandem Gene Duplication ◽  
Genome Wide ◽  
Differential Gene

Abstract Finding causal relationships between genotypic and phenotypic variation is a key focus of evolutionary biology, human genetics and plant breeding. To identify genome-wide patterns underlying trait diversity, we assembled a high-quality reference genome of Cardamine hirsuta, a close relative of the model plant Arabidopsis thaliana. We combined comparative genome and transcriptome analyses with the experimental tools available in C. hirsuta to investigate gene function and phenotypic diversification. Our findings highlight the prevalent role of transcription factors and tandem gene duplications in morphological evolution. We identified a specific role for the transcriptional regulators PLETHORA5/7 in shaping leaf diversity and link tandem gene duplication with differential gene expression in the explosive seed pod of C. hirsuta. Our work highlights the value of comparative approaches in genetically tractable species to understand the genetic basis for evolutionary change.

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