scholarly journals An Arabidopsis gene encoding a C2H2-domain protein with alternatively spliced transcripts is essential for endosperm development

2012 ◽  
Vol 63 (16) ◽  
pp. 5935-5944 ◽  
Author(s):  
Xiaoduo Lu ◽  
Yuan Li ◽  
Yanping Su ◽  
Qiuju Liang ◽  
Hongyan Meng ◽  
...  
Keyword(s):  
Endosperm Development ◽  
Gene Encoding ◽  
Arabidopsis Gene ◽  
Alternatively Spliced ◽  
Domain Protein

scholarly journals The AGL62 MADS Domain Protein Regulates Cellularization during Endosperm Development in Arabidopsis

2008 ◽  
Vol 20 (3) ◽  
pp. 635-647 ◽  
Author(s):  
Il-Ho Kang ◽  
Joshua G. Steffen ◽  
Michael F. Portereiko ◽  
Alan Lloyd ◽  
Gary N. Drews
Keyword(s):  
Endosperm Development ◽  
Domain Protein

AtGRDP1 Gene Encoding a Glycine-Rich Domain Protein Is Involved in Germination and Responds to ABA Signalling

2014 ◽  
Vol 32 (6) ◽  
pp. 1187-1202 ◽  
Author(s):  
Aída Araceli Rodríguez-Hernández ◽  
María Azucena Ortega-Amaro ◽  
Pablo Delgado-Sánchez ◽  
Julio Salinas ◽  
Juan Francisco Jiménez-Bremont
Keyword(s):  
Gene Encoding ◽  
Rich Domain ◽  
Domain Protein

scholarly journals A Gene Encoding a DUF247 Domain Protein Cosegregates with theSSelf-Incompatibility Locus in Perennial Ryegrass

2015 ◽  
Vol 33 (4) ◽  
pp. 870-884 ◽  
Author(s):  
Chloé Manzanares ◽  
Susanne Barth ◽  
Daniel Thorogood ◽  
Stephen L. Byrne ◽  
Steven Yates ◽  
...  
Keyword(s):  
Perennial Ryegrass ◽  
Gene Encoding ◽  
Domain Protein ◽  
Incompatibility Locus

scholarly journals Small RNA-mediated chromatin silencing directed to the 3' region of the Arabidopsis gene encoding the developmental regulator, FLC

2007 ◽  
Vol 104 (9) ◽  
pp. 3633-3638 ◽  
Author(s):  
S. Swiezewski ◽  
P. Crevillen ◽  
F. Liu ◽  
J. R. Ecker ◽  
A. Jerzmanowski ◽  
...  
Keyword(s):  
Small Rna ◽  
Gene Encoding ◽  
Arabidopsis Gene

scholarly journals Prevalent skipping of an individual exon accounts for shortened protein 4.1 Presles

Blood ◽  
1992 ◽  
Vol 80 (11) ◽  
pp. 2925-2930 ◽  
Author(s):  
S Feddal ◽  
S Hayette ◽  
F Baklouti ◽  
R Rimokh ◽  
R Wilmotte ◽  
...  
Keyword(s):  
Red Blood Cells ◽  
Alternative Splice ◽  
Splice Site ◽  
Blood Cells ◽  
Protein 4.1 ◽  
Alternative Splice Site ◽  
Alternatively Spliced ◽  
Domain Protein

Abstract An asymptomatic shortened variant of protein 4.1 (-8.5 Kd) was first recognized in the red blood cells and designated protein 4.1 Presles. We show here that the missing segment belongs to the 22/24 Kd domain. Protein 4.1 cDNA from reticulocytes was amplified, mapped, and sequenced. The truncation appeared to result from the prevalent skipping of an individual and alternatively spliced exon, also called motif II, whereas this motif is preferentially retained under normal conditions. The same phenomenon was observed in lympho-blastoid cells. Sequencing over 80 bp of intronic sequences 5′ and 3′ of motif II failed to reveal any change. A new alternative splice site was incidently found 81 nucleotide downstream of motif II in both normal and truncated 4.1 mRNA.

scholarly journals Alternatively spliced mRNA variants of chloroplast ascorbate peroxidase isoenzymes in spinach leaves

1999 ◽  
Vol 338 (1) ◽  
pp. 41-48 ◽  
Author(s):  
Kazuya YOSHIMURA ◽  
Yukinori YABUTA ◽  
Masahiro TAMOI ◽  
Takahiro ISHIKAWA ◽  
Shigeru SHIGEOKA
Keyword(s):  
Ascorbate Peroxidase ◽  
Differential Splicing ◽  
Gene Encoding ◽  
S1 Nuclease ◽  
C Terminus ◽  
Mrna Variants ◽  
Alternatively Spliced ◽  
Splicing Efficiency ◽  
Spinach Leaves

We have previously shown that stromal and thylakoid-bound ascorbate peroxidase (APX) isoenzymes of spinach chloroplasts arise from a common pre-mRNA by alternative splicing in the C-terminus of the isoenzymes [Ishikawa, Yoshimura, Tamoi, Takeda and Shigeoka (1997) Biochem. J. 328, 795–800]. To explore the production of mature, functional mRNA encoding chloroplast APX isoenzymes, reverse transcriptase-mediated PCR and S1 nuclease protection analysis were performed with poly(A)+ RNA or polysomal RNA from spinach leaves. As a result, four mRNA variants, one form of thylakoid-bound APX (tAPX-I) and three forms of stromal APX (sAPX-I, sAPX-II and sAPX-III), were identified. The sAPX-I and sAPX-III mRNA species were generated through the excision of intron 11; they encoded the previously identified sAPX protein. Interestingly, the sAPX-II mRNA was generated by the insertion of intron 11 between exons 11 and 12. The use of this insertional sequence was in frame with the coding sequence and would lead to the production of a novel isoenzyme containing a C-terminus in which a seven-residue sequence replaced the last residue of the previously identified sAPX. The recombinant novel enzyme expressed in Escherichia coli showed the same enzymic properties (except for molecular mass) as the recombinant sAPX from the previously identified sAPX-I mRNA, suggesting that the protein translated from the sAPX-II mRNA is functional as a soluble APX in vivo. The S1 nuclease protection analysis showed that the expression levels of mRNA variants for sAPX and tAPX isoenzymes are in nearly equal quantities throughout the spinach leaves grown under normal conditions. The present results demonstrate that the expression of chloroplast APX isoenzymes is regulated by a differential splicing efficiency that is dependent on the 3´-terminal processing of ApxII, the gene encoding the chloroplast APX isoenzymes.

AtGDI2, a novel Arabidopsis gene encoding a Rab GDP dissociation inhibitor

Gene ◽  
1998 ◽  
Vol 206 (1) ◽  
pp. 137-143 ◽  
Author(s):  
Takashi Ueda ◽  
Takeshi Yoshizumi ◽  
Toyoaki Anai ◽  
Minami Matsui ◽  
Hirofumi Uchimiya ◽  
...  
Keyword(s):  
Gene Encoding ◽  
Arabidopsis Gene ◽  
Gdp Dissociation Inhibitor

scholarly journals An Arabidopsis Gene Encoding a Ca2+-Binding Protein is Induced by Abscisic Acid during Dehydration

2000 ◽  
Vol 41 (7) ◽  
pp. 898-903 ◽  
Author(s):  
Seiji Takahashi ◽  
Takeshi Katagiri ◽  
Kazuko Yamaguchi-Shinozaki ◽  
Kazuo Shinozaki
Keyword(s):  
Abscisic Acid ◽  
Binding Protein ◽  
Gene Encoding ◽  
Arabidopsis Gene
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