Whole-genome comparison of two Acinetobacter baumannii isolates from a single patient, where resistance developed during tigecycline therapy

Michael Hornsey; Nick Loman; David W. Wareham; Matthew J. Ellington; Mark J. Pallen; Jane F. Turton; Anthony Underwood; Tom Gaulton; Claire P. Thomas; Michel Doumith; David M. Livermore; Neil Woodford

doi:10.1093/jac/dkr168

Whole-genome comparison of two Acinetobacter baumannii isolates from a single patient, where resistance developed during tigecycline therapy

Journal of Antimicrobial Chemotherapy ◽

10.1093/jac/dkr168 ◽

2011 ◽

Vol 66 (7) ◽

pp. 1499-1503 ◽

Cited By ~ 74

Author(s):

Michael Hornsey ◽

Nick Loman ◽

David W. Wareham ◽

Matthew J. Ellington ◽

Mark J. Pallen ◽

...

Keyword(s):

Acinetobacter Baumannii ◽

Genome Comparison ◽

Whole Genome ◽

Single Patient ◽

Whole Genome Comparison

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Faculty Opinions recommendation of Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1002156.24405 ◽

2001 ◽

Author(s):

Dominique Caugant

Keyword(s):

Genetic Diversity ◽

Campylobacter Jejuni ◽

Low Cost ◽

Genome Comparison ◽

Whole Genome ◽

Whole Genome Comparison

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Use of a cytogenetic whole-genome comparison to resolve phylogenetic relationships among three species: Implications for mammalian systematics and conservation biology

Theriogenology ◽

10.1016/j.theriogenology.2011.12.006 ◽

2012 ◽

Vol 77 (8) ◽

pp. 1615-1623 ◽

Cited By ~ 5

Author(s):

Hon-Tsen Yu ◽

Gwo-Chin Ma ◽

Dong-Jay Lee ◽

Shih-Chien Chin ◽

Ting-Li Chen ◽

...

Keyword(s):

Conservation Biology ◽

Phylogenetic Relationships ◽

Genome Comparison ◽

Whole Genome ◽

Whole Genome Comparison

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Whole Genome Comparison of Campylobacter jejuni Human Isolates Using a Low-Cost Microarray Reveals Extensive Genetic Diversity

Genome Research ◽

10.1101/gr.185801 ◽

2001 ◽

Vol 11 (10) ◽

pp. 1706-1715 ◽

Cited By ~ 220

Author(s):

N. Dorrell

Keyword(s):

Genetic Diversity ◽

Campylobacter Jejuni ◽

Low Cost ◽

Genome Comparison ◽

Whole Genome ◽

Whole Genome Comparison

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Whole genome comparison of donor and cloned dogs

Scientific Reports ◽

10.1038/srep02998 ◽

2013 ◽

Vol 3 (1) ◽

Cited By ~ 7

Author(s):

Hak-Min Kim ◽

Yun Sung Cho ◽

Hyunmin Kim ◽

Sungwoong Jho ◽

Bongjun Son ◽

...

Keyword(s):

Genome Comparison ◽

Whole Genome ◽

Whole Genome Comparison

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Applying SIMD Approach to Whole Genome Comparison on Commodity Hardware

Parallel Processing and Applied Mathematics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-68111-3_129 ◽

2008 ◽

pp. 1220-1229

Author(s):

Arpith Jacob ◽

Marcin Paprzycki ◽

Maria Ganzha ◽

Sugata Sanyal

Keyword(s):

Genome Comparison ◽

Whole Genome ◽

Commodity Hardware ◽

Whole Genome Comparison

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Alignment-free Whole Genome Comparison Using k-mer Forests

2019 19th International Conference on Advances in ICT for Emerging Regions (ICTer) ◽

10.1109/icter48817.2019.9023714 ◽

2019 ◽

Cited By ~ 1

Author(s):

G. Gamage ◽

N. Gimhana ◽

A. Wickramarachchi ◽

V. Mallawaarachchi ◽

I. Perera

Keyword(s):

Genome Comparison ◽

Whole Genome ◽

Alignment Free ◽

Whole Genome Comparison

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Whole-Genome Comparison Reveals Divergent IR Borders and Mutation Hotspots in Chloroplast Genomes of Herbaceous Bamboos (Bambusoideae: Olyreae)

Molecules ◽

10.3390/molecules23071537 ◽

2018 ◽

Vol 23 (7) ◽

pp. 1537 ◽

Cited By ~ 14

Author(s):

Wencai Wang ◽

Siyun Chen ◽

Xianzhi Zhang

Keyword(s):

Genome Comparison ◽

Whole Genome ◽

Chloroplast Genomes ◽

Herbaceous Bamboos ◽

Whole Genome Comparison

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Whole-genome comparison clarifies close phylogenetic relationships between the phyla Dictyoglomi and Thermotogae

Genomics ◽

10.1016/j.ygeno.2011.08.001 ◽

2011 ◽

Vol 98 (5) ◽

pp. 370-375 ◽

Cited By ~ 30

Author(s):

Hiromi Nishida ◽

Teruhiko Beppu ◽

Kenji Ueda

Keyword(s):

Phylogenetic Relationships ◽

Genome Comparison ◽

Whole Genome ◽

Whole Genome Comparison

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Whole Genome Comparison ofThermussp. NMX2.A1 Reveals Principal Carbon Metabolism Differences with Closest RelationThermus scotoductusSA-01

G3 Genes|Genome|Genetics ◽

10.1534/g3.116.032953 ◽

2016 ◽

Vol 6 (9) ◽

pp. 2791-2797 ◽

Cited By ~ 2

Author(s):

Walter J. Müller ◽

Nokuthula Tlalajoe ◽

Errol D. Cason ◽

Derek Litthauer ◽

Oleg Reva ◽

...

Keyword(s):

Carbon Metabolism ◽

Genome Comparison ◽

Whole Genome ◽

Whole Genome Comparison

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Whole-Genome Comparison between Photorhabdus Strains To Identify Genomic Regions Involved in the Specificity of Nematode Interaction

Journal of Bacteriology ◽

10.1128/jb.188.2.809-814.2006 ◽

2006 ◽

Vol 188 (2) ◽

pp. 809-814 ◽

Cited By ~ 22

Author(s):

S. Gaudriault ◽

E. Duchaud ◽

A. Lanois ◽

A.-S. Canoy ◽

S. Bourot ◽

...

Keyword(s):

Dna Microarray ◽

Gene Pool ◽

Heterorhabditis Bacteriophora ◽

Genome Comparison ◽

Whole Genome ◽

Distribution Analysis ◽

Heterorhabditis Megidis ◽

Whole Genome Comparison ◽

Specific Association ◽

Genomic Regions

ABSTRACT The bacterium Photorhabdus establishes a highly specific association with Heterorhabditis, its nematode host. Photorhabdus strains associated with Heterorhabditis bacteriophora or Heterorhabditis megidis were compared using a Photorhabdus DNA microarray. We describe 31 regions belonging to the Photorhabdus flexible gene pool. Distribution analysis of regions among the Photorhabdus genus identified loci possibly involved in nematode specificity.

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