Integrative Taxonomy of Australian Metopia (Sarcophagidae: Miltogramminae) Reveals a New Species and Challenges Traditional Phylogeny

2020 ◽  
Vol 4 (6) ◽  
Author(s):  
Nikolas P Johnston ◽  
James F Wallman ◽  
Thomas Pape
Keyword(s):  
Phylogenetic Analysis ◽  
Species Complex ◽  
Molecular Phylogenetics ◽  
Taxonomic Revision ◽  
Integrated Approach ◽  
Integrative Taxonomy ◽  
Morphological Data ◽  
Australian Species ◽  
A New Species ◽  
Generic Relationships

Abstract A taxonomic revision of all Australian species of Metopia Meigen (Sarcophagidae: Miltogramminae) is completed using an integrated approach combining molecular and morphological data. Metopia nudibasis (Malloch) is redescribed as a species complex and a new endemic Australian species, Metopia sputnik sp. n., is described. Evidence is presented that Metopia sauteri (Townsend) is absent from Australia and this species is therefore removed from the known Australian fauna. Molecular phylogenetics is used to reconstruct interspecific and generic relationships and support morphology-based species hypotheses. Phylogenetic analysis splits Metopia Meigen into two clades, separated by Aenigmetopia Malloch, rendering the former genus nonmonophyletic. The implications of this are discussed.

scholarly journals Taxonomic revision of Australian Amobia Robineau-Desvoidy, 1830 (Sarcophagidae: Miltogramminae): integrating morphology and genetics finds a new species and tackles old problems

2020 ◽  
Vol 722 ◽  
pp. 75-96 ◽  
Author(s):  
Nikolas P. Johnston ◽  
James F. Wallman ◽  
Mark Dowton ◽  
Krzysztof Szpila ◽  
Thomas Pape
Keyword(s):  
New Species ◽  
Molecular Phylogenetics ◽  
Taxonomic Revision ◽  
Integrated Approach ◽  
Molecular Data ◽  
Morphological Data ◽  
Mitochondrial Coi ◽  
Australian Species ◽  
Morphological Species ◽  
A New Species

A taxonomic revision of the Australian species of Amobia Robineau-Desvoidy, 1830 (Diptera: Sarcophagidae: Miltogramminae) is completed using an integrated approach combining four molecular loci (three mitochondrial, COI, ND4 and CYTB; one nuclear, EF1α) and morphological data. A new species, Amobia (s. str.) serpenta sp. nov., endemic to Australia, is described, and Amobia auriceps (Baranov, 1935) and Amobia burnsi (Malloch, 1930) are re-described. Molecular data are used to reconstruct inter-specific and generic relationships and support morphological species hypotheses. Phylogenetic analysis places all three Australian Amobia species together with Amobia signata (Meigen, 1824) (a Palaearctic species) in a single clade sister to Senotainia Macquart, 1846 (in part), which is in agreement with previous phylogenetic studies of the Miltogramminae. In addition to the description of species and molecular phylogenetics, general host associations for the Australian species of Amobia are discussed and evidence for the synonymisation of A. pelopei (Rondani, 1859) and A. auriceps is refuted.

Integrative taxonomy reveals remarkable diversity in Australian Protomiltogramma (Diptera: Sarcophagidae)

Zootaxa ◽  
2021 ◽  
Vol 5043 (1) ◽  
pp. 1-104
Author(s):  
NIKOLAS P. JOHNSTON ◽  
JAMES F. WALLMAN ◽  
KRZYSZTOF SZPILA ◽  
THOMAS PAPE
Keyword(s):  
New Species ◽  
Molecular Phylogenetics ◽  
Taxonomic Revision ◽  
Integrative Taxonomy ◽  
Morphological Data ◽  
Integrative Approach ◽  
Australian Species ◽  
The World ◽  
Flesh Flies

Protomiltogramma Townsend is the largest and most diverse genus of miltogrammine flesh flies in Australia. However, no comprehensive taxonomic work had been completed on the Australian members of this genus in almost a century. This study presents the first taxonomic revision of all Australian species of Protomiltogramma (Sarcophagidae: Miltogramminae), completed using an integrative approach combining molecular and morphological data. Eight new species endemic to Australia are described: P. dalbiensis sp. n., P. grandis sp. n., P. incana sp. n., P. kapnos sp. n., P. nigrisensa sp. n., P. popularis sp. n., P. rubra sp. n. and P. subtilis sp. n. In addition, P. australis Malloch, 1930 is synonymised with P. cincta Townsend, 1916, syn. n. and P. mallochi Verves, 1987 is synonymised with P. laticeps Malloch, 1930, syn. n. Molecular phylogenetics is used to place the Australian Protomiltogramma among the miltogrammine genera of the world.  

scholarly journals Re-Evaluation of the Podosphaera tridactyla Species Complex in Australia

2021 ◽  
Vol 7 (3) ◽  
pp. 171
Author(s):  
Reannon L. Smith ◽  
Tom W. May ◽  
Jatinder Kaur ◽  
Tim I. Sawbridge ◽  
Ross C. Mann ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Powdery Mildew ◽  
Species Complex ◽  
Taxonomic Revision ◽  
Stone Fruit ◽  
Prunus Species ◽  
Wide Range ◽  
Unidentified Species ◽  
The Rose ◽  
Generation Sequencing

The Podosphaera tridactyla species complex is highly variable morphologically and causes powdery mildew on a wide range of Prunus species, including stone fruit. A taxonomic revision of the Po. tridactyla species complex in 2020 identified 12 species, seven of which were newly characterised. In order to clarify which species of this complex are present in Australia, next generation sequencing was used to isolate the fungal ITS+28S and host matK chloroplast gene regions from 56 powdery mildew specimens of stone fruit and ornamental Prunus species accessioned as Po. tridactyla or Oidium sp. in Australian reference collections. The specimens were collected in Australia, Switzerland, Italy and Korea and were collected from 1953 to 2018. Host species were confirmed using matK phylogenetic analysis, which identified that four had been misidentified as Prunus but were actually Malusprunifolia. Podosphaera species were identified using ITS+28S phylogenetic analysis, recognising three Podosphaera species on stone fruit and related ornamental Prunus hosts in Australia. These were Po.pannosa, the rose powdery mildew, and two species in the Po. tridactyla species complex: Po. ampla, which was the predominant species, and a previously unidentified species from peach, which we describe here as Po. cunningtonii.

scholarly journals Primula sunhangii (Primulaceae): a new species from Hubei, Central China

PhytoKeys ◽  
2020 ◽  
Vol 156 ◽  
pp. 103-112
Author(s):  
Jiao Sun ◽  
Dai-Gui Zhang ◽  
Xian-Han Huang ◽  
Komiljon Tojibaev ◽  
Jing-Yuan Yang ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Hubei Province ◽  
Central China ◽  
Morphological Data ◽  
Molecular Phylogenetic Analysis ◽  
Molecular Phylogenetic ◽  
A New Species

This report provides a description of Primula sunhangii from the Shennongjia Forestry District, Hubei Province in Central China, which is categorized as a new species of the primrose family. Primula sunhangii is morphologically similar to P. involucrata Wall. ex Duby in terms of its simple umbel, efarinose, and prolonged bracts. However, P. sunhangii is distinguished by its glabrous sepal, short petiole (compare with blade) and cylindrical calyx and capsule. Molecular phylogenetic analysis based on nuclear and cpDNA genes demonstrates that P. sunhangii and P. involucrata are closely related. Combining genetic and morphological data, the recognition of P. sunhangii as a unique new species is supported.

Taxonomic revision of the Square-tailed Drongo species complex (Passeriformes: Dicruridae) with description of a new species from western Africa

Zootaxa ◽  
2018 ◽  
Vol 4438 (1) ◽  
pp. 105 ◽  
Author(s):  
JÉRÔME FUCHS ◽  
MORY DOUNO ◽  
RAURI C.K. BOWIE ◽  
JON FJELDSÅ
Keyword(s):  
New Species ◽  
Genetic Divergence ◽  
Species Complex ◽  
Morphological Character ◽  
Taxonomic Revision ◽  
Genetic Data ◽  
Sister Species ◽  
Western Africa ◽  
Gallery Forests ◽  
A New Species

We describe a new species of drongo in the Square-tailed Drongo (Dicrurus ludwigii) complex using a combination of biometric and genetic data. The new species differs from previously described taxa in the Square-tailed Drongo complex by possessing a significantly heavier bill and via substantial genetic divergence (6.7%) from its sister-species D. sharpei. The new species is distributed across the gallery forests of coastal Guinea, extending to the Niger and Benue Rivers of Nigeria. We suspect that this taxon was overlooked by previous avian systematists because they either lacked comparative material from western Africa or because the key diagnostic morphological character (bill characteristics) was not measured. We provide an updated taxonomy of the Square-tailed Drongo species complex. 

scholarly journals An integrated approach to delimiting species borders in the genus Chrysotoxum Meigen, 1803 (Diptera: Syrphidae), with description of two new species

2015 ◽  
Vol 84 (4) ◽  
pp. 285-304 ◽  
Author(s):  
Zorica Nedeljković ◽  
Jelena Ačanski ◽  
Mihajla Đan ◽  
Dragana Obreht-Vidaković ◽  
Antonio Ricarte ◽  
...  
Keyword(s):  
New Species ◽  
Integrated Approach ◽  
Integrative Taxonomy ◽  
Species Boundaries ◽  
Integrative Approach ◽  
Taxonomic Study ◽  
Additional Species ◽  
Two New Species ◽  
Lateral Margins ◽  
A New Species

Integrative taxonomy tests the validity of taxa using methods additional to traditional morphology. The existence of two different morphotypes in specimens identified as Chrysotoxum vernale Loew (Diptera: Syrphidae) prompted their taxonomic study using an integrative approach that included morphology, wing and male-surstylus geometric morphometrics, genetic and ecological analyses. As a result, a new species is recognised, Chrysotoxum montanum Nedeljković & Vujić sp. nov., and C. vernale is re-defined. A lectotype and paralectotypes are designated for C. vernale to stabilize this concept. An additional species, Chrysotoxum orthostylum Vujić sp. nov., with distinctive male genitalia is also described. The three species share an antenna with the basoflagellomere shorter than the scape plus pedicel and terga with yellow fasciae not reaching the lateral margins. This study confirms the value of integrative approach for resolving species boundaries.

scholarly journals Taxonomic revision and phylogenetic relationships of Dasyloricaria Isbrücker & Nijssen, 1979 (Siluriformes: Loricariidae), with description of a new species

2016 ◽  
Vol 14 (1) ◽  
Author(s):  
Alejandro Londoño-Burbano ◽  
Roberto E. Reis
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Phylogenetic Relationships ◽  
Taxonomic Revision ◽  
Sister Group ◽  
Valid Species ◽  
Maracaibo Basin ◽  
New Synonyms ◽  
Branchial Arches ◽  
A New Species

ABSTRACT A taxonomic revision and phylogenetic analysis were completed for Dasyloricaria . The genus includes three valid species: D . filamentosa and D . latiura previously included in the genus, and a new species described herein. Dasyloricaria have a restricted trans-Andean distribution, with D . filamentosa occurring at the lower and middle Magdalena, lower Cauca, and Sinu in Colombia, and lago Maracaibo basin in Colombia and Venezuela; D . latiura in the Atrato and the Tuyra basins in Colombia and Panama, respectively; and the new species in the upper and middle Magdalena basin in Colombia. New synonyms for D . filamentosa and D . latiura are proposed, and a lectotype is designated for the latter. Dasyloricaria is herein recognized as monophyletic, with D . filamentosa as the sister group of D . latiura , and the new speciesas sister to that clade. Spatuloricaria is hypothesized to be the sister group of Dasyloricaria based on synapomorphies of the neurocranium, branchial arches and external morphology features. The subtribe Rineloricariina was partially corroborated through the phylogenetic analysis. An identification key for the species of Dasyloricaria is provided.

The correlation among molecular phylogenetics, morphological data, and growth temperature of the genus Emericella, and a new species

Mycoscience ◽  
2012 ◽  
Vol 53 (6) ◽  
pp. 433-445 ◽  
Author(s):  
Tetsuhiro Matsuzawa ◽  
Reiko Tanaka ◽  
Yoshikazu Horie ◽  
Yan Hui ◽  
Paride Abliz ◽  
...  
Keyword(s):  
New Species ◽  
Growth Temperature ◽  
Molecular Phylogenetics ◽  
Morphological Data ◽  
A New Species

Taxonomic revision of the marbled skink (Cyclodina oliveri, Reptilia: Scincidae) species complex, with a description of a new species

2008 ◽  
Vol 35 (2) ◽  
pp. 129-146 ◽  
Author(s):  
David G. Chapple ◽  
Geoff B. Patterson ◽  
Dianne M. Gleeson ◽  
Charles H. Daugherty ◽  
Peter A. Ritchie
Keyword(s):  
New Species ◽  
Species Complex ◽  
Taxonomic Revision ◽  
A New Species

Taxonomic Revision of Passiflora Subgenus Tetrapathea Including the Monotypic Genera Hollrungia and Tetrapathea (Passifloraceae), and a New Species of Passiflora

2009 ◽  
Vol 34 (2) ◽  
pp. 375-385 ◽  
Author(s):  
Shawn E. Krosnick ◽  
Andrew J. Ford ◽  
John V. Freudenstein
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Taxonomic Revision ◽  
Single Species ◽  
World Species ◽  
Old World ◽  
A New Species

Recent phylogenetic analysis of the Old World species of Passiflora has indicated that two monotypic genera in the Passifloraceae, Hollrungia and Tetrapathea, are strongly supported as belonging to the genus Passiflora. Additionally, a new species from Australia was found to belong to the same clade as Hollrungia and Tetrapathea. Consequently, a taxonomic revision is presented here of Passiflora subgenus Tetrapathea including these three taxa. Tetrapathea tetrandra, the type of Passiflora subgenus Tetrapathea and historically recognized as both T. tetrandra and P. tetrandra, is formally accepted here as P. tetrandra. The single species of Hollrungia, H. aurantioides, is transferred to Passiflora subgenus Tetrapathea as P. aurantioides. The new and so far unnamed species in Passiflora subgenus Tetrapathea from Australia is also described as P. kuranda sp. nov.

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