scholarly journals Condition indices of Atlantic cod (Gadus morhua) biased by capturing method

2012 ◽  
Vol 69 (10) ◽  
pp. 1781-1788 ◽  
Author(s):  
Mikael Ovegård ◽  
Kim Berndt ◽  
Sven-Gunnar Lunneryd
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Geographical Area ◽  
Lower Growth ◽  
Fish Stocks ◽  
Underlying Causes ◽  
The Difference ◽  
Condition Indices ◽  
The Baltic ◽  
Size At Age

Abstract Ovegård, M., Berndt, K., and Lunneryd, S-G. 2012. Condition indices of Atlantic cod (Gadus morhua) biased by capturing method. – ICES Journal of Marine Science, 69: 1781–1788. In studies evaluating the condition and general health status of fish stocks, the method used for catching the fish is seldom considered as a factor of importance. In this study, condition indices were compared between cod caught in pots, gillnets, and on hooks in the same geographical area. The results showed that cod (Gadus morhua) caught on baited gear types (pots and hooks) generally displayed a lower condition and an older age (i.e. suggesting a lower growth rate) compared to cod caught in gillnets. It is unclear whether these results merely illustrate divergent behavioural responses in fish originating from one single population, or if these divergent behavioural components represent distinct subpopulations displaying different mean conditions and growth rates. Regardless of the underlying causes, the results not only show that parts of the Baltic cod stock are in extremely poor condition, they also indicate that different gear types used in the same area could target similar-sized conspecifics exhibiting large differences in condition and size-at-age. The potential impact of the difference in condition between the pots and other gear types could hamper the implementation of the cod pot as a potentially seal-safe and sustainable fishing method.

Accuracy and precision in stock separation of north-east Arctic and Norwegian coastal cod by otoliths - comparing readings, image analyses and a genetic method

2005 ◽  
Vol 56 (5) ◽  
pp. 753 ◽  
Author(s):  
Erik Berg ◽  
Tuula H. Sarvas ◽  
Alf Harbitz ◽  
Svein Erik Fevolden ◽  
Arnt Børre Salberg
Keyword(s):  
Visual Inspection ◽  
Gadus Morhua ◽  
Atlantic Cod ◽  
Complete Separation ◽  
Arctic Cod ◽  
Genetic Method ◽  
North East ◽  
Accuracy And Precision ◽  
Growth Zones ◽  
The Difference

The distinction between north-east Arctic cod and Norwegian coastal cod, two major groups of Atlantic cod (Gadus morhua L.), has for many years been based on different distance and shape similarities between the two first translucent growth zones in the otoliths, subjectively decided by visual inspection in a binocular. To analyse the certainty of this technique, four independent readers have classified 263 cod otoliths in total from five different geographical areas. For three of the readers, between 82% and 89% of the classification results coincided with independent results based on genetic analyses. Further, 38 cod otoliths, where the readers were certain of the classification (21 north-east Arctic cod and 17 coastal cod) were classified by several image analysis methods. A complete separation was obtained by using the ratio of the circumferences of the two zones, providing a typical ratio of approximately 2 for coastal and 1.5 for north-east Arctic cod. The otolith method for separating the two types of cod has been considered adequately accurate in assessing the two stocks of cod. However, the method is sensitive to subjective interpretation, and action needs to be taken to minimise the difference in interpretation among otolith readers.

scholarly journals Temporal trends in probabilistic maturation reaction norms and growth of Atlantic cod (Gadus morhua) on the Icelandic shelf

2009 ◽  
Vol 66 (10) ◽  
pp. 1719-1733 ◽  
Author(s):  
Heidi Pardoe ◽  
Anssi Vainikka ◽  
Gudmundur Thórdarson ◽  
Gudrun Marteinsdóttir ◽  
Mikko Heino
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Temporal Trends ◽  
Age Groups ◽  
Reaction Norm ◽  
Genetic Change ◽  
Regional Survey ◽  
Fish Stocks ◽  
Abundance Estimates ◽  
Intensive Fishing

Decreasing temporal trends in probabilistic maturation reaction norm (PMRN) midpoints, symptomatic of earlier maturation despite environmentally induced variation in growth, have been observed in many exploited fish stocks. Here, we studied the growth and maturation trends of female and male Icelandic cod ( Gadus morhua ) by estimating PMRN midpoints for cohorts 1964–1999 and found evidence that a shift towards maturation at smaller sizes and younger ages has occurred independently of changes in growth, condition, and temperature. Weighting the data with regional survey abundance estimates to account for spatial heterogeneity in maturity status and sampling intensity did not qualitatively affect the temporal trends. Length-at-age also decreased through the study period, which, through simulations, could be attributed to the energetic costs of earlier maturity at maturing age groups but not at younger ages. These findings support the hypothesis that such changes in maturation schedules are not caused by environmental factors alone but could also reflect a genetic change, potentially in response to intensive fishing.

Benthic Habitats and the Effects of Fishing

2005 ◽  
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Fish Habitat ◽  
Weather Conditions ◽  
Data Sets ◽  
Fish Stocks ◽  
Habitat Features ◽  
The Irish Sea ◽  
Belfast Lough ◽  
Existing Data

<strong><em>Abstract. </em><strong>Fishers have often complained that standard United Kingdom groundfish survey data do not adequately reflect the grounds targeted by commercial fishers, and hence, scientists tend to make overcautious estimates of fish abundance. Such criticisms are of particular importance if we are to make a creditable attempt to classify potential essential fish habitat (EFH) using existing data from groundfish surveys. Nevertheless, these data sets provide a powerful tool to examine temporal abundance of fish on a large spatial scale. Here, we report a questionnaire-type survey of fishers (2001–2002) that invited them to plot the location of grounds of key importance in the Irish Sea and to comment on key habitat features that might constitute EFH for Atlantic cod <em>Gadus morhua</em>, haddock <em>Melanogrammus aeglefinus</em>, and European whiting <em>Merlangius merlangus</em>. Plotted grounds were cross-checked using records of vessel sightings by fishery protection aircraft (1985–1999). A comparison of the areas of seabed highlighted by fishers and the observations made on groundfish surveys were broadly compatible for all three species of gadoids examined. Both methods indicated important grounds for cod and European whiting off northern Wales, the Ribble estuary, Solway Firth, north of Dublin, and Belfast Lough. The majority of vessel sightings by aircraft did not match the areas plotted by fishers. However, fishing restrictions, adverse weather conditions, and seasonal variation of fish stocks may have forced fishers to operate outside their favored areas on the (few) occasions that they had been recorded by aircraft. Fishers provided biological observations that were consistent among several independent sources (e.g., the occurrence of haddock over brittle star [ophiuroid] beds). We conclude that fishers’ knowledge is a useful supplement to existing data sets that can better focus more detailed EFH studies.

scholarly journals Environmental DNA concentrations are correlated with regional biomass of Atlantic cod in oceanic waters

2019 ◽  
Vol 2 (1) ◽  
Author(s):  
Ian Salter ◽  
Mourits Joensen ◽  
Regin Kristiansen ◽  
Petur Steingrund ◽  
Poul Vestergaard
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Environmental Dna ◽  
Sampling Effort ◽  
Trawl Survey ◽  
Catch Per Unit Effort ◽  
Fish Stocks ◽  
Powerful Approach ◽  
Commercially Important ◽  
Positive Correlations

AbstractEnvironmental DNA (eDNA) has emerged as a powerful approach for studying marine fisheries and has the potential to negate some of the drawbacks of trawl surveys. However, successful applications in oceanic waters have to date been largely focused on qualitative descriptions of species inventories. Here we conducted a quantitative eDNA survey of Atlantic cod (Gadus morhua) in oceanic waters and compared it with results obtained from a standardized demersal trawl survey. Detection of eDNA originating from Atlantic cod was highly concordant (80%) with trawl catches. We observed significantly positive correlations between the regional integrals of Atlantic cod biomass (kg) and eDNA quantities (copies) (R2 = 0.79, P = 0.003) and between sampling effort-normalised Catch Per Unit Effort (kg hr−1) and eDNA concentrations (copies L−1) (R2 = 0.71, P = 0.008). These findings extend the potential application of environmental DNA to regional biomass assessments of commercially important fish stocks in the ocean.

How to validate a length-based model of single-species fish stock dynamics

2006 ◽  
Vol 63 (11) ◽  
pp. 2531-2542 ◽  
Author(s):  
Kasper Kristensen ◽  
Peter Lewy ◽  
Jan E Beyer
Keyword(s):  
Survey Data ◽  
Gadus Morhua ◽  
Negative Binomial ◽  
Atlantic Cod ◽  
Population Level ◽  
Single Species ◽  
Model Complexity ◽  
Fish Stock ◽  
Statistical Hypotheses ◽  
The Baltic

This paper validates a new length-based model of the dynamics of fish stocks or crustaceans by hierarchically testing statistical hypotheses and thereby investigating model complexity. The approach is based entirely on scientific survey data and on determination of the statistical distributions of the number of fish caught per haul in each length class. In our example, the negative binomial distribution is statistically accepted and linked to the population level through the new length-based model. The model is derived from the characteristics of continuous recruitment, individually based growth, and continuous, length-dependent mortality rates. Continuous recruitment with annually varying recruitment peaks and individually based growth was crucial for obtaining a model that could be statistically accepted. Natural mortality was estimated as well by the model. The model was applied to survey data for Atlantic cod (Gadus morhua) in the Baltic. Its simple generic nature, as well as the validation procedure, is useful in studying and understanding life history and stock dynamics.

Survey gear calibration independent of spatial fish distribution

2004 ◽  
Vol 61 (4) ◽  
pp. 636-647 ◽  
Author(s):  
Peter Lewy ◽  
J Rasmus Nielsen ◽  
Holger Hovgård
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Survey Design ◽  
Fish Distribution ◽  
Simulation Studies ◽  
Conversion Factors ◽  
The Baltic ◽  
Standard Software ◽  
Track Line ◽  
Stock Abundance

Trawl surveys provide important information for evaluation of relative stock abundance fluctuations over time. Therefore, when survey gears or vessels are changed, it is important to compare the efficiency and selectivity of old and new gears and vessels. A method for estimation of conversion factors is developed based on a survey design where paired hauls are taken in the same trawl track line. The method explicitly accounts for changes in fish density caused by trawling disturbance. A generalized linear model for paired hauls catches is analytically derived and the gear conversion and disturbance parameters with their precision are obtained using standard software. Simulation studies carried out additionally showed that the estimated conversion factors were practically unbiased. Because of the independence of the spatial fish distribution, the new method is preferable to the traditional paired hauls design for which it is generally not possible to obtain the statistical properties of the estimated conversion factors. The paper is concluded with suggestions on how to optimize survey design. The method was used to estimate conversion factors for Atlantic cod (Gadus morhua) from Danish gear calibration experiments in the Baltic Sea.

scholarly journals Seasonal cycles in weight and condition in Atlantic cod (Gadus morhua L.) in relation to fisheries

2005 ◽  
Vol 62 (5) ◽  
pp. 1006-1015 ◽  
Author(s):  
L.G.S. Mello ◽  
G.A. Rose
Keyword(s):  
Gadus Morhua ◽  
Physiological Condition ◽  
Atlantic Cod ◽  
Management Strategies ◽  
Maximum Yield ◽  
Product Yield ◽  
Economic Benefits ◽  
Hepatosomatic Index ◽  
Economic Returns ◽  
Condition Indices

Abstract Seasonal cycle in weight and physiological condition of Atlantic cod (Gadus morhua) influenced productivity and economic impacts of the cod fishery in Placentia Bay, Newfoundland. Condition indices (Fulton's K condition factor and hepatosomatic index – HSI) were lowest during the spawning season (spring) and increased rapidly during the postspawning period, reaching maximum values by fall (K and HSI increased on average 24% and 82% between spring and fall, respectively). Somatic weight and condition indices varied seasonally. Condition indices were correlated with an industry index of product yield. Historically, cod fisheries have been prosecuted during all seasons, but simulations of 1997–1999 fisheries indicate that a fall fishery (period of peak physiological condition) resulted in a 8–17% decrease in the number of cod removed from the stock while maintaining the same weight-based quotas, and profiting from maximum yield and better product quality. Spring and summer fisheries resulted in lower yield (6%) and quality (5–26%) of fish products by weight. Seasonal biological cycles could be used as templates for management strategies that promote fisheries conservation and economic benefits by harvesting fish during periods when biological impacts are minimal and economic returns maximal.

scholarly journals Detecting regime shifts in fish stock dynamics

2015 ◽  
Vol 72 (11) ◽  
pp. 1619-1628 ◽  
Author(s):  
Tommi Perälä ◽  
Anna Kuparinen
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Stock Assessment ◽  
Detection Algorithm ◽  
Regime Shifts ◽  
Change Point Detection ◽  
Fish Stock ◽  
Fish Stocks ◽  
Data Generating Process ◽  
Change In Mean

Environmental factors such as water temperature, salinity, and the abundance of zooplankton can have major effects on certain fish stocks’ ability to produce juveniles and, thus, stock renewal ability. This variability in stock productivity manifests itself as different productivity regimes. Here, we detect productivity regime shifts by analyzing recruit-per-spawner time series with Bayesian online change point detection algorithm. The algorithm infers the time since the last regime shift (change in mean or variance or both) as well as the parameters of the data-generating process for the current regime sequentially. We demonstrate the algorithm’s performance using simulated recruitment data from an individual-based model and further apply the algorithm to stock assessment estimates for four Atlantic cod (Gadus morhua) stocks obtained from RAM legacy database. Our analysis shows that the algorithm performs well when the variability between the regimes is high enough compared with the variability within the regimes. The algorithm found several productivity regimes for all four cod stocks, and the findings suggest that the stocks are currently in low productivity regimes, which have started during the 1990s and 2000s.

Depth-dependent vertebral number of Atlantic cod (Gadus morhua) on the Magdalen Shallows and Scotian Shelf: stock mixing or microgeographic trends within populations?

2000 ◽  
Vol 57 (12) ◽  
pp. 2393-2401 ◽  
Author(s):  
D P Swain ◽  
K T Frank
Keyword(s):  
Gadus Morhua ◽  
Atlantic Cod ◽  
Spatial Scales ◽  
Relative Length ◽  
Scotian Shelf ◽  
Age Classes ◽  
Vertebral Number ◽  
Size At Age ◽  
Stock Mixing ◽  
Summer Feeding

We examined spatial variation in the vertebral number of Atlantic cod (Gadus morhua) during the summer feeding season in the southern Gulf of St. Lawrence and on the Scotian Shelf. Mean vertebral number increased significantly with depth in the southern Gulf and on the northeastern Scotian Shelf but not on the southwestern Scotian Shelf. In the southern Gulf, where sampling was most extensive, mean vertebral number increased steadily as depth increased from 25 m to over 175 m. Mean vertebral number was also strongly related to relative length within age-classes, with the larger fish at age having more vertebrae. However, the association between vertebral number and depth could not be attributed to confounding between depth and size at age. These results indicate either unexpected mixing between neighbouring cod populations or unexpected structure at fine spatial scales within cod populations.

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