scholarly journals The drug-minded protein interaction database (DrumPID) for efficient target analysis and drug development

Database ◽  
2016 ◽  
Vol 2016 ◽  
pp. baw041 ◽  
Author(s):  
Meik Kunz ◽  
Chunguang Liang ◽  
Santosh Nilla ◽  
Alexander Cecil ◽  
Thomas Dandekar
Keyword(s):  
Drug Development ◽  
Protein Interaction ◽  
Target Analysis ◽  
Interaction Database ◽  
Protein Interaction Database

scholarly journals An inverse small molecule screen to design a chemically defined medium supporting long-term growth of Drosophila cell lines

2014 ◽  
Vol 10 (10) ◽  
pp. 2713-2723 ◽  
Author(s):  
M. Burnette ◽  
T. Brito-Robinson ◽  
J. Li ◽  
J. Zartman
Keyword(s):  
Protein Interaction ◽  
Defined Medium ◽  
Chemically Defined Medium ◽  
Drosophila Cell ◽  
Interaction Database ◽  
Novel Approach ◽  
Small Molecule Screen ◽  
Growth Promoting ◽  
Protein Interaction Database

We describe a novel approach to screen for growth promoting compounds and score putative targets using a drug–protein interaction database.

scholarly journals HMNPPID—human malignant neoplasm protein–protein interaction database

2019 ◽  
Vol 13 (S1) ◽  
Author(s):  
Qingqing Li ◽  
Zhihao Yang ◽  
Zhehuan Zhao ◽  
Ling Luo ◽  
Zhiheng Li ◽  
...  
Keyword(s):  
Protein Interaction ◽  
Protein Interactions ◽  
Molecular Mechanisms ◽  
Malignant Neoplasm ◽  
Biomedical Literature ◽  
Malignant Neoplasms ◽  
Protein Protein Interactions ◽  
Protein Protein Interaction ◽  
Interaction Database ◽  
Protein Interaction Database

Abstract Background Protein–protein interaction (PPI) information extraction from biomedical literature helps unveil the molecular mechanisms of biological processes. Especially, the PPIs associated with human malignant neoplasms can unveil the biology behind these neoplasms. However, such PPI database is not currently available. Results In this work, a database of protein–protein interactions associated with 171 kinds of human malignant neoplasms named HMNPPID is constructed. In addition, a visualization program, named VisualPPI, is provided to facilitate the analysis of the PPI network for a specific neoplasm. Conclusions HMNPPID can hopefully become an important resource for the research on PPIs of human malignant neoplasms since it provides readily available data for healthcare professionals. Thus, they do not need to dig into a large amount of biomedical literatures any more, which may accelerate the researches on the PPIs of malignant neoplasms.

scholarly journals MPIDB: the microbial protein interaction database

2008 ◽  
Vol 24 (15) ◽  
pp. 1743-1744 ◽  
Author(s):  
Johannes Goll ◽  
Seesandra V. Rajagopala ◽  
Shen C. Shiau ◽  
Hank Wu ◽  
Brian T. Lamb ◽  
...  
Keyword(s):  
Protein Interaction ◽  
Microbial Protein ◽  
Interaction Database ◽  
Protein Interaction Database

scholarly journals A Brief Review of RNA-Protein Interaction Database Resources

2017 ◽  
Vol 3 (1) ◽  
pp. 6 ◽  
Author(s):  
Ying Yi ◽  
Yue Zhao ◽  
Yan Huang ◽  
Dong Wang
Keyword(s):  
Protein Interaction ◽  
Interaction Database ◽  
Protein Interaction Database

HCVpro: Hepatitis C virus protein interaction database

2011 ◽  
Vol 11 (8) ◽  
pp. 1971-1977 ◽  
Author(s):  
Samuel K. Kwofie ◽  
Ulf Schaefer ◽  
Vijayaraghava S. Sundararajan ◽  
Vladimir B. Bajic ◽  
Alan Christoffels
Keyword(s):  
Hepatitis C Virus ◽  
Hepatitis C ◽  
Protein Interaction ◽  
Virus Protein ◽  
Interaction Database ◽  
Protein Interaction Database

scholarly journals A comprehensive manually curated protein–protein interaction database for the Death Domain superfamily

2011 ◽  
Vol 40 (D1) ◽  
pp. D331-D336 ◽  
Author(s):  
Dongseop Kwon ◽  
Jong Hwan Yoon ◽  
Soo-Yong Shin ◽  
Tae-Ho Jang ◽  
Hong-Gee Kim ◽  
...  
Keyword(s):  
Protein Interaction ◽  
Death Domain ◽  
Protein Protein Interaction ◽  
Interaction Database ◽  
Protein Interaction Database ◽  
Death Domain Superfamily

FPPI:Fusarium graminearumProtein−Protein Interaction Database

2009 ◽  
Vol 8 (10) ◽  
pp. 4714-4721 ◽  
Author(s):  
Xing-Ming Zhao ◽  
Xiao-Wei Zhang ◽  
Wei-Hua Tang ◽  
Luonan Chen
Keyword(s):  
Protein Interaction ◽  
Interaction Database ◽  
Protein Interaction Database
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