scholarly journals MemBuilder: a web-based graphical interface to build heterogeneously mixed membrane bilayers for the GROMACS biomolecular simulation program

2013 ◽  
Vol 30 (3) ◽  
pp. 439-441 ◽  
Author(s):  
Mohammad Mehdi Ghahremanpour ◽  
Seyed Shahriar Arab ◽  
Saman Biook Aghazadeh ◽  
Jin Zhang ◽  
David van der Spoel
Keyword(s):  
Simulation Program ◽  
Graphical Interface ◽  
Web Based ◽  
Membrane Bilayers ◽  
Biomolecular Simulation

Prediction of Future Market Price for Agricultural Commodities

2015 ◽  
Vol 3 (1) ◽  
Author(s):  
Sagar Pathane ◽  
Uttam Patil ◽  
Nandini Sidnal
Keyword(s):  
Mobile Application ◽  
Market Price ◽  
Commodity Prices ◽  
Future Price ◽  
Future Market ◽  
Graphical Interface ◽  
Agricultural Commodities ◽  
Agricultural Commodity ◽  
Web Based ◽  
Agriculture Products

The agricultural commodity prices have a volatile nature which may increase or decrease inconsistently causing an adverse effect on the economy. The work carried out here for predicting prices of agricultural commodities is useful for the farmers because of which they can sow appropriate crop depending on its future price. Agriculture products have seasonal rates, these rates are spread over the entire year. If these rates are known/alerted to the farmers in advance, then it will be promising on ROI (Return on Investments). It requires that the rates of the agricultural products updated into the dataset of each state and each crop, in this application five crops are considered. The predictions are done based on neural networks Neuroph framework in java platform and also the previous years data. The results are produced on mobile application using android. Web based interface is also provided for displaying processed commodity rates in graphical interface. Agricultural experts can follow these graphs and predict market rates which can be informed to the farmers. The results will be provided based on the location of the users of this application.

scholarly journals Granatum: a graphical single-cell RNA-Seq analysis pipeline for genomics scientists

2017 ◽  
Author(s):  
Xun Zhu ◽  
Thomas Wolfgruber ◽  
Austin Tasato ◽  
David G. Garmire ◽  
Lana X Garmire
Keyword(s):  
Single Cell ◽  
Enrichment Analysis ◽  
Graphical Interface ◽  
Analysis Pipeline ◽  
Web Based ◽  
Cell Clustering ◽  
Gene Filtering ◽  
Study Heterogeneity ◽  
Differential Gene ◽  
Cell Series

AbstractBackgroundSingle-cell RNA sequencing (scRNA-Seq) is an increasingly popular platform to study heterogeneity at the single-cell level.Computational methods to process scRNA-Seq have limited accessibility to bench scientists as they require significant amounts of bioinformatics skills.ResultsWe have developed Granatum, a web-based scRNA-Seq analysis pipeline to make analysis more broadly accessible to researchers. Without a single line of programming code, users can click through the pipeline, setting parameters and visualizing results via the interactive graphical interface Granatum conveniently walks users through various steps of scRNA-Seq analysis. It has a comprehensive list of modules, including plate merging and batch-effect removal, outlier-sample removal, gene filtering, geneexpression normalization, cell clustering, differential gene expression analysis, pathway/ontology enrichment analysis, protein-networ interaction visualization, and pseudo-time cell series construction.ConclusionsGranatum enables broad adoption of scRNA-Seq technology by empowering the bench scientists with an easy-to-use graphical interface for scRNA-Seq data analysis. The package is freely available for research use athttp://garmiregroup.org/granatum/app

Web-based Simulation for Contrast Transfer Function and Envelope Functions

2001 ◽  
Vol 7 (4) ◽  
pp. 329-334
Author(s):  
Wen Jiang ◽  
Wah Chiu
Keyword(s):  
Transfer Function ◽  
Simulation Program ◽  
Web Browsers ◽  
Contrast Transfer Function ◽  
Web Based ◽  
Universal Accessibility ◽  
Internet Explorer ◽  
Envelope Functions

AbstractWe have implemented a Web-based simulation program for the contrast transfer function and envelope functions in Java and JavaScript. The simulation provides interactive controls of all the parameters in those functions. In addition to the predefined functions, users can easily define new functions that use any of the parameters in the preset functions. The most useful feature of this new simulation program is the convenient, universal accessibility through Web browsers on any computer platform that supports Java, such as Netscape and Internet Explorer.

scholarly journals LIONESS Lab: a free web-based platform for conducting interactive experiments online

2020 ◽  
Vol 6 (1) ◽  
pp. 95-111 ◽  
Author(s):  
Marcus Giamattei ◽  
Kyanoush Seyed Yahosseini ◽  
Simon Gächter ◽  
Lucas Molleman
Keyword(s):  
Waiting Time ◽  
Graphical Interface ◽  
Online Experiments ◽  
Web Based ◽  
Methodological Challenges ◽  
Online Experimentation ◽  
Key Features ◽  
User Friendly ◽  
Time Form

Abstract LIONESS Lab is a free web-based platform for interactive online experiments. An intuitive, user-friendly graphical interface enables researchers to develop, test, and share experiments online, with minimal need for programming experience. LIONESS Lab provides solutions for the methodological challenges of interactive online experimentation, including ways to reduce waiting time, form groups on-the-fly, and deal with participant dropout. We highlight key features of the software, and show how it meets the challenges of conducting interactive experiments online.

Web Based User-Friendly Graphical Interface to Control Robots with ROS Environment

2021 ◽  
Author(s):  
Dinodi Divyanjana Rajapaksha ◽  
Mohamed Nafeel Mohamed Nuhuman ◽  
Sewmini Dananji Gunawardhana ◽  
Atchuthan Sivalingam ◽  
Mohamed Nimran Mohamed Hassan ◽  
...  
Keyword(s):  
Graphical Interface ◽  
Web Based ◽  
User Friendly

Accessing standardized acoustic metadata: A web-based graphical interface for an acoustic metadata server

2019 ◽  
Vol 146 (4) ◽  
pp. 2935-2936
Author(s):  
Jeffery Cavner ◽  
Marie Roch ◽  
Roger Whitney ◽  
Simone Baumann-Pickering
Keyword(s):  
Graphical Interface ◽  
Web Based ◽  
Metadata Server

scholarly journals CHARMM: The biomolecular simulation program

2009 ◽  
Vol 30 (10) ◽  
pp. 1545-1614 ◽  
Author(s):  
B. R. Brooks ◽  
C. L. Brooks ◽  
A. D. Mackerell ◽  
L. Nilsson ◽  
R. J. Petrella ◽  
...  
Keyword(s):  
Simulation Program ◽  
Biomolecular Simulation
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