Ygr125w/Vsb1-dependent accumulation of basic amino acids into vacuoles of Saccharomyces cerevisiae

Author(s):  
Miyuki Kawano-Kawada ◽  
Haruka Ichimura ◽  
Shota Ohnishi ◽  
Yusuke Yamamoto ◽  
Yumi Kawasaki ◽  
...  

Abstract The Ygr125w was previously identified as a vacuolar membrane protein by a proteomic analysis. We found that vacuolar levels of basic amino acids drastically decreased in ygr125wΔ cells. Since N- or C-terminally tagged Ygr125w was not functional, an expression plasmid of YGR125w with HA3-tag inserted in its N-terminal hydrophilic region was constructed. Introduction of this plasmid into ygr125w∆ cells restored the vacuolar levels of basic amino acids. We successfully detected the uptake activity of arginine by the vacuolar membrane vesicles depending on HA3-YGR125w expression. A conserved aspartate residue in the predicted first transmembrane helix (D223) was indispensable for the accumulation of basic amino acids. YGR125w has been recently reported as a gene involved in vacuolar storage of arginine; and it is designated as VSB1. Taken together, our findings indicate that Ygr125w/Vsb1 contributes to the uptake of arginine into vacuoles and vacuolar compartmentalization of basic amino acids.

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Miyuki Kawano-Kawada ◽  
Kunio Manabe ◽  
Haruka Ichimura ◽  
Takumi Kimura ◽  
Yuki Harada ◽  
...  

Abstract In nutrient-rich conditions, basic amino acids are actively accumulated into the vacuoles by H+-coupled transporters in Saccharomyces cerevisiae. In addition to the H+-coupled systems, the existence of an exchanger for arginine and histidine was indicated by kinetic analysis using isolated vacuolar membrane vesicles; however, the gene(s) involved in the activity has not been identified. Here, we show that the uptake activity of arginine driven by an artificially imposed histidine gradient decreased significantly by the disruption of the gene encoding vacuolar PQ-loop protein Ypq2, but not by those of Ypq1 and Ypq3. The exchange activity was restored by the expression of YPQ2. Furthermore, the substitution of a conserved proline residue, Pro29, in Ypq2 greatly decreased the exchange activity. These results suggest that Ypq2 is responsible for the exchange activity of arginine and histidine across the vacuolar membrane, and the conserved proline residue in the PQ-loop motif is required for the activity.


2016 ◽  
Vol 80 (6) ◽  
pp. 1125-1130 ◽  
Author(s):  
Kunio Manabe ◽  
Miyuki Kawano-Kawada ◽  
Koichi Ikeda ◽  
Takayuki Sekito ◽  
Yoshimi Kakinuma

2005 ◽  
Vol 71 (5) ◽  
pp. 2310-2317 ◽  
Author(s):  
Marc W. T. Werten ◽  
Frits A. de Wolf

ABSTRACT Heterologous proteins secreted by yeast and fungal expression hosts are occasionally degraded at basic amino acids. We cloned Pichia pastoris homologs of the Saccharomyces cerevisiae basic residue-specific endoproteases Kex2 and Yps1 to evaluate their involvement in the degradation of a secreted mammalian gelatin. Disruption of the P. pastoris KEX2 gene prevented proteolysis of the foreign protein at specific monoarginylic sites. The S. cerevisiae α-factor preproleader used to direct high-level gelatin secretion was correctly processed at its dibasic site in the absence of the prototypical proprotein convertase Kex2. Disruption of the YPS1 gene had no effect on gelatin degradation or processing of the α-factor propeptide. When both the KEX2 and YPS1 genes were disrupted, correct precursor maturation no longer occurred. The different substrate specificities of both proteases and their mutual redundancy for propeptide processing indicate that P. pastoris kex2 and yps1 single-gene disruptants can be used for the α-factor leader-directed secretion of heterologous proteins otherwise degraded at basic residues.


1998 ◽  
Vol 180 (7) ◽  
pp. 1962-1964 ◽  
Author(s):  
Ken Nishimura ◽  
Kazuei Igarashi ◽  
Yoshimi Kakinuma

ABSTRACT A vacuolar H+-ATPase-negative mutant ofSaccharomyces cerevisiae was highly sensitive to nickel ion. Accumulation of nickel ion in the cells of this mutant of less than 60% of the value for the parent strain arrested growth, suggesting a role for this ATPase in sequestering nickel ion into vacuoles. An artificially imposed pH gradient (interior acid) induced transient nickel ion uptake by vacuolar membrane vesicles, which was inhibited by collapse of the pH difference but not of the membrane potential. Nickel ion transport into vacuoles in a pH gradient-dependent manner is thus important for its detoxification in yeast.


FEBS Letters ◽  
1993 ◽  
Vol 323 (1-2) ◽  
pp. 113-118 ◽  
Author(s):  
P.J.M. Belde ◽  
J.H. Vossen ◽  
G.W.F.H. Borst-Pauwels ◽  
A.P.R. Theuvenet

2012 ◽  
Vol 76 (9) ◽  
pp. 1802-1804 ◽  
Author(s):  
Masaya ISHIMOTO ◽  
Naoko SUGIMOTO ◽  
Takayuki SEKITO ◽  
Miyuki KAWANO-KAWADA ◽  
Yoshimi KAKINUMA

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