scholarly journals Plant science’s next top models

2020 ◽  
Vol 126 (1) ◽  
pp. 1-23 ◽  
Author(s):  
Igor Cesarino ◽  
Raffaele Dello Ioio ◽  
Gwendolyn K Kirschner ◽  
Michael S Ogden ◽  
Kelsey L Picard ◽  
...  
Keyword(s):  
Molecular Mechanisms ◽  
Morphological Diversity ◽  
Science Research ◽  
Plant Biology ◽  
Model Organisms ◽  
Novel Technologies ◽  
Form And Function ◽  
Plant Life ◽  
Plant Form ◽  
And Function

Abstract Background Model organisms are at the core of life science research. Notable examples include the mouse as a model for humans, baker’s yeast for eukaryotic unicellular life and simple genetics, or the enterobacteria phage λ in virology. Plant research was an exception to this rule, with researchers relying on a variety of non-model plants until the eventual adoption of Arabidopsis thaliana as primary plant model in the 1980s. This proved to be an unprecedented success, and several secondary plant models have since been established. Currently, we are experiencing another wave of expansion in the set of plant models. Scope Since the 2000s, new model plants have been established to study numerous aspects of plant biology, such as the evolution of land plants, grasses, invasive and parasitic plant life, adaptation to environmental challenges, and the development of morphological diversity. Concurrent with the establishment of new plant models, the advent of the ‘omics’ era in biology has led to a resurgence of the more complex non-model plants. With this review, we introduce some of the new and fascinating plant models, outline why they are interesting subjects to study, the questions they will help to answer, and the molecular tools that have been established and are available to researchers. Conclusions Understanding the molecular mechanisms underlying all aspects of plant biology can only be achieved with the adoption of a comprehensive set of models, each of which allows the assessment of at least one aspect of plant life. The model plants described here represent a step forward towards our goal to explore and comprehend the diversity of plant form and function. Still, several questions remain unanswered, but the constant development of novel technologies in molecular biology and bioinformatics is already paving the way for the next generation of plant models.

scholarly journals Plant phenotyping: increasing throughput and precision at multiple scales

2017 ◽  
Vol 44 (1) ◽  
pp. v ◽  
Author(s):  
Malcolm J. Hawkesford ◽  
Argelia Lorence
Keyword(s):  
Multiple Scales ◽  
Field Trials ◽  
Plant Biology ◽  
Plant Phenotyping ◽  
Form And Function ◽  
Technological Advances ◽  
Basic Plant ◽  
Plant Form ◽  
And Function ◽  
Invasive Techniques

In this special issue of Functional Plant Biology, we present a perspective of the current state of the art in plant phenotyping. The applications of automated and detailed recording of plant characteristics using a range of mostly non-invasive techniques are described. Papers range from tissue scale analysis through to aerial surveying of field trials and include model plant species such as Arabidopsis as well as commercial crops such as sugar beet and cereals. The common denominators are high throughput measurements, data rich analyses often utilising image based data capture, requirements for validation when proxy measurement are employed and in many instances a need to fuse datasets. The outputs are detailed descriptions of plant form and function. The papers represent technological advances and important contributions to basic plant biology, and these studies are commonly multidisciplinary, involving engineers, software specialists and plant physiologists. This is a fast moving area producing large datasets and analytical requirements are often common between very diverse platforms.

scholarly journals Trade-offs among plant reproductive traits determine interactions with floral visitors

2021 ◽  
Author(s):  
Jose B. Lanuza ◽  
Romina Rader ◽  
Jamie Stavert ◽  
Liam K. Kendall ◽  
Manu E. Saunders ◽  
...  
Keyword(s):  
Life History ◽  
Reproductive Traits ◽  
Life History Strategies ◽  
Form And Function ◽  
Plant Life ◽  
Trade Offs ◽  
Floral Visitors ◽  
Plant Form ◽  
And Function ◽  
Plant Pollinator

Plant life-history strategies are constrained by cost-benefit trade-offs that determine plant form and function. However, despite recent advances in the understanding of trade-offs for vegetative and physiological traits, little is known about plant reproductive economics and how they constrain plant life-history strategies and shape interactions with floral visitors. Here, we investigate plant reproductive trade-offs and how these drive interactions with floral visitors using a dataset of 17 reproductive traits for 1,506 plant species from 28 plant-pollinator studies across 18 countries. We tested whether a plant's reproductive strategy predicts its interactions with floral visitors and if the different reproductive traits predict the plant's role within the pollination network. We found that over half of all plant reproductive trait variation was explained by two independent axes that encompassed plant form and function. Specifically, the first axis indicated the presence of a trade-off between flower number and flower size, while the second axis indicated a pollinator dependency trade-off. Plant reproductive trade-offs helped explain partly the presence or absence of interactions with floral visitors, but not differences in visitation rate. However, we did find important differences in the interaction level among floral visitor guilds on the different axes of trait variation. Finally, we found that plant size and floral rewards were the most important traits in the understanding of the plant species network role. Our results highlight the importance of plant reproductive trade-offs in determining plant life-history strategies and plant-pollinator interactions in a global context.

Tropical Alpine Environments: Plant Form and Function.

1997 ◽  
Vol 22 (3) ◽  
pp. 592
Author(s):  
Henrik Balslev ◽  
Philip W. Rundel ◽  
Alan P. Smith ◽  
F. C. Meinzer
Keyword(s):  
Form And Function ◽  
Tropical Alpine ◽  
Plant Form ◽  
And Function ◽  
Alpine Environments

scholarly journals PhenoSpace: A Shiny application to visualize trait data in the phenotypic space of the global spectrum of plant form and function

2021 ◽  
Vol 11 (4) ◽  
pp. 1526-1534
Author(s):  
Jules Segrestin ◽  
Kevin Sartori ◽  
Marie‐Laure Navas ◽  
Jens Kattge ◽  
Sandra Díaz ◽  
...  
Keyword(s):  
Form And Function ◽  
Plant Form ◽  
And Function ◽  
Shiny Application

Environmental–biomechanical reciprocity and the evolution of plant material properties

2021 ◽  
Author(s):  
Karl J Niklas ◽  
Frank W Telewski
Keyword(s):  
Physical Environment ◽  
Structural Changes ◽  
Abiotic Factors ◽  
Biotic Interactions ◽  
Cellular Solids ◽  
Form And Function ◽  
Evolutionary Innovation ◽  
Plant Form ◽  
And Function ◽  
Abiotic Environmental Factors

Abstract Abiotic–biotic interactions have shaped organic evolution since life first began. Abiotic factors influence growth, survival, and reproductive success, whereas biotic responses to abiotic factors have changed the physical environment (and indeed created new environments). This reciprocity is well illustrated by land plants who begin and end their existence in the same location while growing in size over the course of years or even millennia, during which environment factors change over many orders of magnitude. A biomechanical, ecological, and evolutionary perspective reveals that plants are (i) composed of materials (cells and tissues) that function as cellular solids (i.e. materials composed of one or more solid and fluid phases); (ii) that have evolved greater rigidity (as a consequence of chemical and structural changes in their solid phases); (iii) allowing for increases in body size and (iv) permitting acclimation to more physiologically and ecologically diverse and challenging habitats; which (v) have profoundly altered biotic as well as abiotic environmental factors (e.g. the creation of soils, carbon sequestration, and water cycles). A critical component of this evolutionary innovation is the extent to which mechanical perturbations have shaped plant form and function and how form and function have shaped ecological dynamics over the course of evolution.

hlh-12, a gene that is necessary and sufficient to promote migration of gonadal regulatory cells in C. elegans, evolved within the Caenorhabditis clade

Genetics ◽  
2021 ◽  
Author(s):  
Hana E Littleford ◽  
Karin Kiontke ◽  
David H A Fitch ◽  
Iva Greenwald
Keyword(s):  
Ectopic Expression ◽  
Morphological Diversity ◽  
Nematode Species ◽  
Bhlh Protein ◽  
Vulval Development ◽  
C Elegans ◽  
Form And Function ◽  
Somatic Gonad ◽  
And Function ◽  
Necessary And Sufficient

Abstract Specialized cells of the somatic gonad primordium of nematodes play important roles in the final form and function of the mature gonad. C. elegans hermaphrodites are somatic females that have a two-armed, U-shaped gonad that connects to the vulva at the midbody. The outgrowth of each gonad arm from the somatic gonad primordium is led by two female Distal Tip Cells (fDTC), while the Anchor Cell (AC) remains stationary and central to coordinate uterine and vulval development. The bHLH protein HLH-2 and its dimerization partners LIN-32 and HLH-12 had previously been shown to be required for fDTC specification. Here, we show that ectopic expression of both HLH-12 and LIN-32 in cells with AC potential transiently transforms them into fDTC-like cells. Furthermore, hlh-12 was known to be required for the fDTCs to sustain gonad arm outgrowth. Here, we show that ectopic expression of HLH-12 in the normally stationary AC causes displacement from its normal position, and that displacement likely results from activation of the leader program of fDTCs because it requires genes necessary for gonad arm outgrowth. Thus, HLH-12 is both necessary and sufficient to promote gonadal regulatory cell migration. As differences in female gonadal morphology of different nematode species reflect differences in the fate or migratory properties of the fDTCs or of the AC, we hypothesized that evolutionary changes in the expression of hlh-12 may underlie evolution of such morphological diversity. However, we were unable to identify an hlh-12 ortholog outside of Caenorhabditis. Instead, by performing a comprehensive phylogenetic analysis of all Class II bHLH proteins in multiple nematode species, we found that HLH-12 evolved within the Caenorhabditis clade, possibly by duplicative transposition of hlh-10. Our analysis suggests that control of gene regulatory hierarchies for gonadogenesis can be remarkably plastic during evolution without adverse phenotypic consequence.

Herbaceous monocot plant form and function along a tropical rain-forest light gradient: a reversal of dicot strategy

2009 ◽  
Vol 25 (1) ◽  
pp. 103-106 ◽  
Author(s):  
Nathan G. Swenson
Keyword(s):  
Tropical Forests ◽  
Environmental Gradients ◽  
Plant Performance ◽  
Seed Plants ◽  
Form And Function ◽  
Light Gradient ◽  
Whole Plant ◽  
Plant Form ◽  
And Function ◽  
High Degree

Whole plant form and function vary spectacularly across the seed plants. In recent years, plant evolutionary ecologists have begun to document this diversity on large geographic scales by analysing ‘functional traits’ that are indicative of whole plant performance across environmental gradients (Swenson & Enquist 2007, Wright et al. 2004). Despite the high degree of functional diversity in tropical forests, convergence in function does occur locally along successional or light gradients (Bazzaz & Pickett 1980, Swaine & Whitmore 1988).

scholarly journals A developmental biologist’s journey to rediscover the Zen of plant physiology

F1000Research ◽  
2015 ◽  
Vol 4 ◽  
pp. 264 ◽  
Author(s):  
José R. Dinneny
Keyword(s):  
Plant Physiology ◽  
Human Population ◽  
Holistic Approach ◽  
Normal Function ◽  
Plant Biology ◽  
Form And Function ◽  
Adaptive Mechanisms ◽  
Basic Concepts ◽  
Living Organisms ◽  
And Function

Physiology, which is often viewed as a field of study distinct from development, is technically defined as the branch of biology that explores the normal function of living organisms and their parts. Because plants normally develop continuously throughout their life, plant physiology actually encompasses all developmental processes. Viewing plant biology from a physiologist’s perspective is an attempt to understand the interconnectedness of development, form, and function in the context of multidimensional complexity in the environment. To meet the needs of an expanding human population and a degrading environment, we must understand the adaptive mechanisms that plants use to acclimate to environmental change, and this will require a more holistic approach than is used by current molecular studies. Grand challenges for studies on plant physiology require a more sophisticated understanding of the environment that plants grow in, which is likely to be at least as complex as the plant itself. Moving the lab to the field and using the field for inspiration in the lab need to be expressly promoted by the community as we work to apply the basic concepts learned through reductionist approaches toward a more integrated and realistic understanding of the plant.

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