scholarly journals Whole-Genome Sequencing Analysis of Nontyphoidal Salmonella enterica of Chicken Meat and Human Origin Under Surveillance in Sri Lanka

2019 ◽  
Vol 16 (7) ◽  
pp. 531-537 ◽  
Author(s):  
Moon Y.F. Tay ◽  
Sujatha Pathirage ◽  
Lakshmi Chandrasekaran ◽  
Uddami Wickramasuriya ◽  
Nirasha Sadeepanie ◽  
...  
Keyword(s):  
Sri Lanka ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Chicken Meat ◽  
Whole Genome ◽  
Sequencing Analysis ◽  
Human Origin

scholarly journals Whole Genome Sequencing Analysis of Salmonella enterica Serovar Typhi: History and Current Approaches

2021 ◽  
Vol 9 (10) ◽  
pp. 2155
Author(s):  
Wan Ratmaazila Wan Makhtar ◽  
Izwan Bharudin ◽  
Nurul Hidayah Samsulrizal ◽  
Nik Yusnoraini Yusof
Keyword(s):  
Infectious Diseases ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Point Of Care ◽  
Genomic Research ◽  
Whole Genome ◽  
Sequencing Analysis ◽  
Significant Information ◽  
Salmonella Enterica Serovar Typhi

In recent years, the advance in whole-genome sequencing technology has changed the study of infectious diseases. The emergence of genome sequencing has improved the understanding of infectious diseases, which has revamped many fields, such as molecular microbiology, epidemiology, infection control, and vaccine production. In this review we discuss the findings of Salmonella enterica serovar Typhi genomes, publicly accessible from the initial complete genome to the recent update of Salmonella enterica serovar Typhi genomes, which has greatly improved Salmonella enterica serovar Typhi and other pathogen genomic research. Significant information on genetic changes, evolution, antimicrobial resistance, virulence, pathogenesis, and investigation from the genome sequencing of S. Typhi is also addressed. This review will gather information on the variation of the Salmonella enterica serovar Typhi genomes and hopefully facilitate our understanding of their genome evolution, dynamics of adaptation, and pathogenesis for the development of the typhoid point-of-care diagnostics, medications, and vaccines.

Whole-genome sequencing analysis and CRISPR genotyping of rare antibiotic-resistant Salmonella enterica serovars isolated from food and related sources

2021 ◽  
Vol 93 ◽  
pp. 103601
Author(s):  
Daniel F.M. Monte ◽  
Matthew A. Nethery ◽  
Rodolphe Barrangou ◽  
Mariza Landgraf ◽  
Paula J. Fedorka-Cray
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Whole Genome ◽  
Sequencing Analysis ◽  
Antibiotic Resistant

scholarly journals Outbreak of Salmonella enterica serotype Poona in infants linked to persistent Salmonella contamination in an infant formula manufacturing facility, France, August 2018 to February 2019

2019 ◽  
Vol 24 (13) ◽  
Author(s):  
Gabrielle Jones ◽  
Maria Pardos de la Gandara ◽  
Laura Herrera-Leon ◽  
Silvia Herrera-Leon ◽  
Carmen Varela Martinez ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Infant Formula ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Outbreak Detection ◽  
Whole Genome ◽  
Sequencing Analysis ◽  
Manufacturing Facility

We describe a Salmonella Poona outbreak involving 31 infant cases in France. Following outbreak detection on 18 January 2019, consumption of rice-based infant formula manufactured at a facility in Spain was identified as the probable cause, leading to a recall on 24 January. Whole genome sequencing analysis linked present outbreak isolates to a 2010–11 S. Poona outbreak in Spain associated with formula manufactured in the same facility, indicating a persistent source of contamination.

Evaluation of Whole Genome Sequencing for outbreak detection of Salmonella enterica serovar Enteritidis

2020 ◽  
Author(s):  
Ainhoa Arrieta-Gisasola ◽  
Aitor Atxaerandio Landa ◽  
Javier Garaizar ◽  
Joseba Bikandi ◽  
José Karkamo ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Outbreak Detection ◽  
Whole Genome ◽  
Salmonella Enterica Serovar Enteritidis

scholarly journals Evaluation of Whole Genome Sequencing for Outbreak Detection of Salmonella enterica

PLoS ONE ◽  
2014 ◽  
Vol 9 (2) ◽  
pp. e87991 ◽  
Author(s):  
Pimlapas Leekitcharoenphon ◽  
Eva M. Nielsen ◽  
Rolf S. Kaas ◽  
Ole Lund ◽  
Frank M. Aarestrup
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Salmonella Enterica ◽  
Outbreak Detection ◽  
Whole Genome
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