scholarly journals Peroxisome Degradation by Microautophagy in Pichia pastoris: Identification of Specific Steps and Morphological Intermediates

1998 ◽  
Vol 141 (3) ◽  
pp. 625-636 ◽  
Author(s):  
Yasuyoshi Sakai ◽  
Antonius Koller ◽  
Linda K. Rangell ◽  
Gilbert A. Keller ◽  
Suresh Subramani
Keyword(s):  
Green Fluorescent Protein ◽  
Pichia Pastoris ◽  
Fluorescent Protein ◽  
Peroxisomal Targeting ◽  
Targeting Signal ◽  
Complementation Groups ◽  
Green Fluorescent ◽  
Kinetics Of ◽  
Pyridinium Dibromide ◽  
Shed Light

We used the dye N-(3-triethylammoniumpropyl)-4-(p-diethylaminophenylhexatrienyl) pyridinium dibromide (FM4-64) and a fusion protein, consisting of the green fluorescent protein appended to the peroxisomal targeting signal, Ser-Lys-Leu (SKL), to label the vacuolar membrane and the peroxisomal matrix, respectively, in living Pichia pastoris cells and followed by fluorescence microscopy the morphological and kinetic intermediates in the vacuolar degradation of peroxisomes by microautophagy and macroautophagy. Structures corresponding to the intermediates were also identified by electron microscopy. The kinetics of appearance and disappearance of these intermediates is consistent with a precursor–product relationship between intermediates, which form the basis of a model for microautophagy. Inhibitors affecting different steps of microautophagy did not impair peroxisome delivery to the vacuole via macroautophagy, although inhibition of vacuolar proteases affected the final vacuolar degradation of green fluorescent protein (S65T mutant version [GFP])-SKL via both autophagic pathways. P. pastoris mutants defective in peroxisome microautophagy (pag mutants) were isolated and characterized for the presence or absence of the intermediates. These mutants, comprising 6 complementation groups, support the model for microautophagy. Our studies indicate that the microautophagic degradation of peroxisomes proceeds via specific intermediates, whose generation and/or processing is controlled by PAG gene products, and shed light on the poorly understood phenomenon of peroxisome homeostasis.

Accurate and live peroxisome biogenesis evaluation achieved by lentiviral expression of a green fluorescent protein fused to a peroxisome targeting signal 1

2020 ◽  
Vol 153 (5) ◽  
pp. 295-306 ◽  
Author(s):  
Tanguy Demaret ◽  
Guillaume E. Courtoy ◽  
Joachim Ravau ◽  
Patrick Van Der Smissen ◽  
Mustapha Najimi ◽  
...  
Keyword(s):  
Green Fluorescent Protein ◽  
Fluorescent Protein ◽  
Peroxisome Biogenesis ◽  
Targeting Signal ◽  
Green Fluorescent

scholarly journals Viral Preprotoxin Signal Sequence Allows Efficient Secretion of Green Fluorescent Protein by Candida glabrata, Pichia pastoris, Saccharomyces cerevisiae, and Schizosaccharomyces pombe

2004 ◽  
Vol 70 (2) ◽  
pp. 961-966 ◽  
Author(s):  
Antje Eiden-Plach ◽  
Tatjana Zagorc ◽  
Tanja Heintel ◽  
Yvonne Carius ◽  
Frank Breinig ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Green Fluorescent Protein ◽  
Pichia Pastoris ◽  
Schizosaccharomyces Pombe ◽  
Protein Secretion ◽  
Candida Glabrata ◽  
Fluorescent Protein ◽  
Signal Sequence ◽  
Foreign Protein ◽  
Green Fluorescent

ABSTRACT Besides its importance as model organism in eukaryotic cell biology, yeast species have also developed into an attractive host for the expression, processing, and secretion of recombinant proteins. Here we investigated foreign protein secretion in four distantly related yeasts (Candida glabrata, Pichia pastoris, Saccharomyces cerevisiae, and Schizosaccharomyces pombe) by using green fluorescent protein (GFP) as a reporter and a viral secretion signal sequence derived from the K28 preprotoxin (pptox), the precursor of the yeast K28 virus toxin. In vivo expression of GFP fused to the N-terminal pptox leader sequence and/or expression of the entire pptox gene was driven either from constitutive (PGK1 and TPI1) or from inducible and/or repressible (GAL1, AOX1, and NMT1) yeast promoters. In each case, GFP entered the secretory pathway of the corresponding host cell; confocal fluorescence microscopy as well as sodium dodecyl sulfate-polyacrylamide gel electrophoresis and Western analysis of cell-free culture supernatants confirmed that GFP was efficiently secreted into the culture medium. In addition to the results seen with GFP, the full-length viral pptox was correctly processed in all four yeast genera, leading to the secretion of a biologically active virus toxin. Taken together, our data indicate that the viral K28 pptox signal sequence has the potential for being used as a unique tool in recombinant protein production to ensure efficient protein secretion in yeast.

scholarly journals C-terminal tripeptide Ser-Asn-Leu (SNL) of human D-aspartate oxidase is a functional peroxisome-targeting signal

1998 ◽  
Vol 336 (2) ◽  
pp. 367-371 ◽  
Author(s):  
Leen AMERY ◽  
Chantal BREES ◽  
Myriam BAES ◽  
Chiaki SETOYAMA ◽  
Retsu MIURA ◽  
...  
Keyword(s):  
Green Fluorescent Protein ◽  
Amino Acid ◽  
Fluorescent Protein ◽  
Consensus Sequence ◽  
C Terminus ◽  
Targeting Signal ◽  
Fluorescent Pattern ◽  
Green Fluorescent ◽  
Positively Charged

The functionality of the C-terminus (Ser-Asn-Leu; SNL) of human d-aspartate oxidase, an enzyme proposed to have a role in the inactivation of synaptically released d-aspartate, as a peroxisome-targeting signal (PTS1) was investigated in vivoand in vitro. Bacterially expressed human d-aspartate oxidase was shown to interact with the human PTS1-binding protein, peroxin protein 5 (PEX5p). Binding was gradually abolished by carboxypeptidase treatment of the oxidase and competitively inhibited by a Ser-Lys-Leu (SKL)-containing peptide. After transfection of mouse fibroblasts with a plasmid encoding green fluorescent protein (GFP) extended by PKSNL (the C-terminal pentapeptide of the oxidase), a punctate fluorescent pattern was evident. The modified GFP co-localized with peroxisomal thiolase as shown by indirect immunofluorescence. On transfection in fibroblasts lacking PEX5p receptor, GFP–PKSNL staining was cytosolic. Peroxisomal import of GFP extended by PGSNL (replacement of the positively charged fourth-last amino acid by glycine) seemed to be slower than that of GFP–PKSNL, whereas extension by PKSNG abolished the import of the modified GFP. Taken together, these results indicate that SNL, a tripeptide not fitting the PTS1 consensus currently defined in mammalian systems, acts as a functional PTS1 in mammalian systems, and that the consensus sequence, based on this work and that of other groups, has to be broadened to (S/A/C/K/N)-(K/R/H/Q/N/S)-L.

scholarly journals The sorting sequence of the peroxisomal integral membrane protein PMP47 is contained within a short hydrophilic loop.

1996 ◽  
Vol 133 (2) ◽  
pp. 269-280 ◽  
Author(s):  
J M Dyer ◽  
J A McNew ◽  
J M Goodman
Keyword(s):  
Amino Acids ◽  
Fluorescent Protein ◽  
Membrane Surface ◽  
Integral Membrane Protein ◽  
The Matrix ◽  
Peroxisomal Targeting ◽  
Targeting Signal ◽  
Green Fluorescent ◽  
Necessary And Sufficient ◽  
Hydrophilic Loop

No targeting sequence for peroxisomal integral membrane proteins has yet been identified. We have previously shown that a region of 67 amino acids is necessary to target Pmp47, a protein that spans the membrane six times, to peroxisomes. This region comprises two membrane spans and the intervening loop. We now demonstrate that the 20 amino acid loop, which is predicted to face the matrix, is both necessary and sufficient for peroxisomal targeting. Sufficiency was demonstrated with both chloramphenicol acetyltransferase and green fluorescent protein as carriers. There is a cluster of basic amino acids in the middle of the loop that we predict protrudes from the membrane surface into the matrix by a flanking stem structure. We show that the targeting signal is composed of this basic cluster and a block of amino acids immediately down-stream from it.

Development of Pichia pastoris as a rumen escape vehicle for the intestinal delivery of recombinant proteins in ruminants

2004 ◽  
Vol 84 (4) ◽  
pp. 611-619 ◽  
Author(s):  
C. E. Strauss ◽  
T. A. McAllister ◽  
L. B. Selinger
Keyword(s):  
Small Intestine ◽  
Green Fluorescent Protein ◽  
Pichia Pastoris ◽  
Recombinant Proteins ◽  
Fluorescent Protein ◽  
Intact Cells ◽  
Ruminal Fluid ◽  
Bioactive Proteins ◽  
Green Fluorescent

The effectiveness of cellular encapsulation as a method for delivery of bioactive proteins and limiting amino acids to the small intestine of ruminants was investigated. Intracellular expression of green fluorescent protein variant (GFPuv) in Pichia pastoris was used as a visible marker to assess the cellular integrity of P. pastoris and determine the potential of this approach for protecting recombinant proteins from microbial proteolysis in the rumen. Fluorescent cells were easily identified in the presence of strained ruminal fluid when viewed by epifluorescent microscopy, and intact cells were readily enumerated. Batch cultures with rumen digesta demonstrated that 93, 97 and 25% of P. pastoris cells remained intact after 36 to 48 h of incubation in clarified ruminal fluid, an isolated bacterial fraction, and whole ruminal fluid, respectively. In continuous culture (Rusitec) with a dilution rate of 0.75 d-1, 19% of P. pastoris cells flowed intact from the fermentation vessels. In vitro abomasal simulations demonstrated that 84% of inoculated P. pastoris had lysed within 12 h of incubation, a property that is necessary for the release of encapsulated protein prior to the small intestine. These in vitro studies suggest that P. pastoris may be an effective vehicle for post-ruminal delivery of bioactive proteins in ruminants. Key words: Ruminal escape vehicle, Pichia pastoris, green fluorescent protein, bypass protein

Sign in / Sign up

Export Citation Format

Share Document