Characterization of chitinase activity and gene expression in muskmelon seeds

2003 ◽  
Vol 13 (2) ◽  
pp. 167-178 ◽  
Author(s):  
X. Witmer ◽  
H. Nonogaki ◽  
E.P. Beers ◽  
K.J. Bradford ◽  
G.E. Welbaum

AbstractChitinase is often produced in higher plants as a general defence response after wounding or pathogenic attack. Since germinating seeds are exposed to soil pathogens, the activity and expression of chitinase in muskmelon (Cucumis melo L.) seeds was investigated. One acidic and three basic chitinase isoforms were detected, beginning 40 d after anthesis in developing and fully mature seeds. Both acidic and basic chitinase isoforms were found in endosperm tissue during imbibition and after radicle emergence. Basic chitinase isoforms, but not acidic isoforms, were detected in the embryonic axes of imbibed seeds and in seeds before germination, indicating that chitinases are developmentally regulated in specific seed tissues. Two complete cDNAs, Cmchi1 and Cmchi2, were cloned from germinated muskmelon seeds and are predicted to encode chitinases that show 95% identity to a class III chitinase from cucumber (Cucumis sativus L.) and 61% identity to a class II chitinase from soybean (Glycine max L.), respectively. Southern blotting indicated that Cmchi2 was present only once in the muskmelon genome, while Cmchi1 may be present in one or two copies. Cmchi1 and Cmchi2 mRNAs were only detected in radicles of germinating seeds and in roots of mature plants, so additional genes other than Cmchi1 and Cmchi2 must be responsible for the chitinase activity in developing seeds. Salicylic acid and benzothiadiazole stimulated the expression of Cmchi1, but not Cmchi2, after radicle emergence. A putative role for chitinase in muskmelon seeds is defence against fungal pathogens.

Plants ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 349
Author(s):  
Dominik Bleša ◽  
Pavel Matušinský ◽  
Romana Sedmíková ◽  
Milan Baláž

The use of biological control is becoming a common practice in plant production. One overlooked group of organisms potentially suitable for biological control are Rhizoctonia-like (Rh-like) fungi. Some of them are capable of forming endophytic associations with a large group of higher plants as well as mycorrhizal symbioses. Various benefits of endophytic associations were proved, including amelioration of devastating effects of pathogens such as Fusarium culmorum. The advantage of Rh-like endophytes over strictly biotrophic mycorrhizal organisms is the possibility of their cultivation on organic substrates, which makes their use more suitable for production. We focused on abilities of five Rh-like fungi isolated from orchid mycorrhizas, endophytic fungi Serendipita indica, Microdochium bolleyi and pathogenic Ceratobasidium cereale to inhibit the growth of pathogenic F. culmorum or Pyrenophora teres in vitro. We also analysed their suppressive effect on wheat infection by F. culmorum in a growth chamber, as well as an effect on barley under field conditions. Some of the Rh-like fungi affected the growth of plant pathogens in vitro, then the interaction with plants was tested. Beneficial effect was especially noted in the pot experiments, where wheat plants were negatively influenced by F. culmorum. Inoculation with S. indica caused higher dry shoot biomass in comparison to plants treated with fungicide. Prospective for future work are the effects of these endophytes on plant signalling pathways, factors affecting the level of colonization and surviving of infectious particles.


1985 ◽  
Vol 63 (6) ◽  
pp. 1035-1039 ◽  
Author(s):  
R. J. Gorecki ◽  
G. E. Harman ◽  
L. R. Mattick

Pea seeds var. Kriter were stored aseptically at 92% relative humidity and 30 °C. After 0, 4, 6, 8, or 10 weeks of storage, viability, vigor, and volatile exudates were determined on sublots of seeds. As storage time increased, vigor, as measured by dehydrogenase activity, growth of embryonic axes, and conductivity decreased. Later, viability also decreased. Imbibing and germinating pea seeds produced ethanol, acetaldehyde, and lesser amounts of methanol. No qualitative differences in volatile exudates were observed from germinating seeds regardless of age or storage condition. Nonaged seeds with highest vigor produced the smallest amounts of volatiles, but with increased aging the quantities of ethanol and acetaldehyde gradually increased. Dry seed produced small quantities of both volatiles. The amount of these compounds produced reached a maximum between 12 and 48 h of germination. Infestation of seed samples with Enterobacter cloacae or Trichoderma harzianum reduced the quantities of these compounds measured. These results indicate that determinations of acetaldehyde and ethanol in the space over germinating seeds by means of gas chromatography may be a useful seed vigor test.


Genes ◽  
2019 ◽  
Vol 10 (6) ◽  
pp. 472 ◽  
Author(s):  
Cao ◽  
Wang ◽  
Li ◽  
Shi ◽  
Gao ◽  
...  

Chitinase is a kind of hydrolase with chitin as a substrate and is proposed to play an essential role in plant defense system by functioning against fungal pathogens through degrading chitin. Recent studies indicated chitinase is also involved in abiotic stress response in plants, helping plants to survive in stressful environments. A. nanus, a rare evergreen broad-leaved shrub distrusted in deserts in Central Asia, exhibits a high level of tolerance to drought and low temperature stresses. To identify the chitinase gene involved in drought and low temperature responses in A. nanus, we performed genome-wide identification, classification, sequence alignment, and spatio-temporal gene expression analysis of the chitinases in A. nanus under osmotic and low temperature stress. A total of 32 chitinase genes belonging to glycosyl hydrolase 18 (GH18) and GH19 families were identified from A. nanus. Class III chitinases appear to be amplified quantitatively in A. nanus, and their genes carry less introns, indicating their involvement in stress response in A. nanus. The expression level of the majority of chitinases varied in leaves, stems, and roots, and regulated under environmental stress. Some chitinases, such as EVM0022783, EVM0020238, and EVM0003645, are strongly induced by low temperature and osmotic stress, and the MYC/ICE1 (inducer of CBF expression 1) binding sites in promoter regions may mediate the induction of these chitinases under stress. These chitinases might play key roles in the tolerance to these abiotic stress in A. nanus and have potential for biotechnological applications. This study provided important data for understanding the biological functions of chitinases in A. nanus.


Plants ◽  
2020 ◽  
Vol 9 (10) ◽  
pp. 1356
Author(s):  
Zhaohan Zhang ◽  
Shahid Ali ◽  
Tianxu Zhang ◽  
Wanpeng Wang ◽  
Linan Xie

Abscisic acid (ABA) plays a crucial role in various aspects of plant growth and development, including fruit development and ripening, seed dormancy, and involvement in response to various environmental stresses. In almost all higher plants, ABA signal transduction requires three core components; namely, PYR/PYL/RCAR ABA receptors (PYLs), type 2C protein phosphatases (PP2Cs), and class III SNF-1-related protein kinase 2 (SnRK2s). The exploration of these three core components is not comprehensive in soybean. This study identified the GmPYL-PP2C-SnRK2s gene family members by using the JGI Phytozome and NCBI database. The gene family composition, conservation, gene structure, evolutionary relationship, cis-acting elements of promoter regions, and its coding protein domains were analyzed. In the entire genome of the soybean, there are 21 PYLs, 36 PP2Cs, and 21 SnRK2s genes; further, by phylogenetic and conservation analysis, 21 PYLs genes are classified into 3 groups, 36 PP2Cs genes are classified into seven groups, and 21 SnRK2s genes are classified into 3 groups. The conserved motifs and domain analysis showed that all the GmPYLs gene family members contain START-like domains, the GmPP2Cs gene family contains PP2Cc domains, and the GmSnRK2s gene family contains S_TK domains, respectively. Furthermore, based on the high-throughput transcriptome sequencing data, the results showed differences in the expression patterns of GmPYL-PP2C-SnRK2s gene families in different tissue parts of the same variety, and the same tissue part of different varieties. Our study provides a basis for further elucidation of the identification of GmPYL-PP2C-SnRK2s gene family members and analysis of their evolution and expression patterns, which helps to understand the molecular mechanism of soybean response to abiotic stress. In addition, this provides a conceptual basis for future studies of the soybean ABA core signal pathway.


Author(s):  
Garima Dukariya ◽  
Anil Kumar

Background and Objective: Chitin is world’s second most abundant structural carbohydrate in nature and is found as a structural component in the cell wall of fungi and exoskeletons of invertebrates. During senescence, it is degraded by the enzyme, chitinase. In addition, chitinase has been exploited for various commercial applications such as control of insects and fungal pathogens in order to protect the crops, waste management, cosmetics and food industries. Chitinases have been found to be widely distributed in various organisms including viruses, animals, bacteria, fungi, higher plants and insects. In the present study, various soil samples enriched in chitinous waste were screened for the isolation of bacteria capable of producing chitinase. Methodology: Chitinase producing bacteria were isolated using serial dilution plating technique onto different agar media. Primary and secondary screening were performed and the isolate producing maximum chitinase was selected for biochemical identification and 16s rRNA sequencing. The secretion of extracellular chitinase by this strain was optimized with respect to pH, temperature, incubation time, substrate concentration, carbon and nitrogen sources and inoculum size. All these components were optimized using OFAT (one factor at a time) approach. Results: A total of 29 bacterial isolates were found exhibiting secretion of extracellular chitinase as determined using zones of clearance. Based on the area of zone of clearance, six isolates were selected for secondary screening and the most potent isolate was identified as Bacillus cereus. The maximum chitinase production by this strain was obtained at 37°C and pH 7.0 after 48 hours of incubation. The maximum chitinase secretion was observed on addition of 1% colloidal chitin and 0.05% yeast extract in the medium.


1987 ◽  
Vol 14 (5) ◽  
pp. 485 ◽  
Author(s):  
AM Haigh ◽  
EWR Barlow

Water uptake during the germination of UC 82B tomato seeds was triphasic. Seed Ψ measurements indicated that phase I imbibition occurred because of the large Ψ gradient between the seed and the imbibition solution (water). During phase II the seed Ψ was in equilibrium with the water. Phase III water uptake recommenced with the onset of radicle emergence without changes in Ψ or Ψπ. Changes in embryo water content were also triphasic. During phase II the embryo Ψ remained at - 1.5 MPa, not in equilibrium with the imbibing solution. At radicle emergence it was - 0.8 MPa and rose to -0.3 MPa as the radicle elongated. There was no evidence of a lowering of embryo Ψπ nor of a build up of Ψp prior to radicle emergence. Water uptake studies with excised embryos indicated that, within the seed, the enclosing tissues prevented the embryo from taking up water. It is suggested that embryo water content is restricted by the constraint on embryo expansion caused by the enclosing endosperm tissue. Lowering of embryo Ψπ to build up Ψp is not necessary for radicle emergence. The control of germination may lie in the mechanism which leads to weakening of this mechanical restraint of the endosperm.


1970 ◽  
Vol 48 (12) ◽  
pp. 2323-2331 ◽  
Author(s):  
D. J. Brown ◽  
D. T. Canvin ◽  
B. F. Zilkey

Endosperm tissue from both developing and germinating castor oil seeds (Ricinus communis L.) was grown as a callus in tissue culture. Callus growths were established from endosperm explants (without embryo) at all stages of seed development except from the quiescent unimbibed seed. Best tissue culture growth was observed with endosperm tissue obtained from seeds that had been germinated for 2 days.The lipid reserves diminished in all endosperm tissue which had been established on culture from germinating seeds but the rate of breakdown was much slower in cultures from 0-day germinated seeds. Glyoxylate cycle activity, as tested by acetate-1- and -2-14C incorporation, was not evident in long-term cultures.The process of lipid accumulation found in normal developing endosperm (24 to 36 days after fertilization) was not retained in culture but was replaced by a process resulting in the rapid loss of the already accumulated oil reserves.As far as could be determined the in vivo biochemical capabilities of the castor bean endosperm were not retained for a lengthy period in the tissue culture conditions used.


1992 ◽  
Vol 2 (1) ◽  
pp. 33-39 ◽  
Author(s):  
Johan C. Pretorius ◽  
J. G. Chris Small

AbstractSubmerging Phaseolus vulgaris cv. Top Crop seeds in air-saturated water for 16 h markedly depresses subsequent germination. This is termed soaking injury. Soaking injury does not occur in seeds soaked in CO2-saturated water. Previous studies have shown that soaking injury can be alleviated by drying seeds or removing seed coats. Submergence therefore leads to a situation in bean seeds which is similar to secondary dormancy.As with dormant seeds, C6/C1 ratios of embryonic axes of seeds soaked in air-saturated water remained high (0.8–1.0) during and after soaking. This was paralleled by low activities of glucose-6-phosphate dehydrogenase (EC.1.1.49) and 6-phosphogluconate dehydrogenase (EC 1.1.1.44). In axes of seeds soaked in CO2-saturated water and in unsoaked seeds C6/C1 ratios declined steadily during soaking/imbibition and reached values of around 0.3 after germination. Slight increases ofglucose-6-phosphate dehydrogenase and 6-phosphogluconate dehydrogenase activities occurred in the pre-germination phase. This was followed by a massive increase after radicle emergence. Synthesis of the plastid isoenzymes was a post-germinative event.It appears that soaking injury depresses protein synthesis. Lack of oxidative pentose phosphate pathway activity appears to be a causative factor in soaking injury.


1994 ◽  
Vol 119 (3) ◽  
pp. 464-467 ◽  
Author(s):  
Paul Jennings ◽  
Mikal E. Saltveit

Unlike horticulturally mature fruit of `Dasher II' and `Poinsett 76' cucumbers (Cucumis sativus L.), two cultivars that differ significantly in their level of chilling tolerance, imbibing and germinating seeds of these two cultivars responded similarly to chilling temperatures (e.g., increases in fresh weight, time to radicle emergence, and root growth). `Dasher II' and `Poinsett 76' seeds were imbibed and germinated at 10 to 30C, and seeds germinated at 25C for 24 h were chilled at 2.5C for various durations. In comparison, seeds from an aged lot of `Poinsett 76' seed (1989) responded very differently from the 1992 seed lots in all experiments. The chilling tolerance level of germinating `Poinsett 76' seed varied with the seedling age as measured by resumption of root growth. Our results suggest that some factor that confers chilling tolerance is gradually lost during the early stages of germination following imbibition.


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