Chromosomal Evolution in the Diplodactylinae (Gekkonidae, Reptilia) .1. Evolutionary Relationships and Patterns of Change

1987 ◽  
Vol 35 (5) ◽  
pp. 507 ◽  
Author(s):  
M King

A chromosomal analysis of 47 species of diplodactyline gekkos indicates that these are a monophyletic assemblage derived from a 2n = 38 acrocentric ancestral karyotype. Four major clades are present, the first possessing the ancestral karyotype. The remainder are defined by the possession of a series of shared derived chromosomal rearrangements, or by the type of chromosome change. The first of these derived clades includes the subgenus Strophurus, which has five fixed, presumed pericentric inversion differences. The second includes members of the D. vittatus species group. Here, a number of chromosome fusions have been established which appear to have been associated with speciation. The third derived clade is distinguished by 19 fixed, presumed pericentric inversions, and includes the genera, Oedura, Rhacodactylus, Bavayia, Pseudothecadactylus, Carphodactylus and Hoplodactylus. It is argued that the 2n=38 acrocentric karyotype common to many of the species is the ancestral karyomorph, and the modifications of this format have been achieved by both chromosome fusion and pericentric inversion. The decision that this is the ancestral karyomorph was based on its dominance in extant species; the fact that similar karyotypes are present in other gekkonid subfamilies (effective out-groups), that 2n =38 all acrocentric ancestral karyotypes are also found in some other lizard families, and that such a diversity of rearrangements was established, provide arguments against any other viable ancestral format. Two discrete modes of chromosomal repatterning are found in the Diplodactylinae: the fixation of presumptive multiple pericentric inversions, producing a karyomorph which characterises large groups of species; and the fixation of fusion or presumptive inversion differences which distinguish individual species or chromosome races. The latter appear to have been associated with speciation. It is clear that in certain groups, such as the Strophurus species group (the members of which all share a derived karyomorph defined by the presence of five inverted chromosomes), speciation has proceeded without gross chromosomal rearrangements.

1975 ◽  
Vol 28 (1) ◽  
pp. 89 ◽  
Author(s):  
Max Kinga ◽  
Dennis King

The karyotypes have been determined of 16 of the 32 species of the genus Varanus, including animals from Africa, Israel, Malaya and Australia. A constant chromosome number of 2n = 40 was observed. The karyotype is divided into eight pairs of large chromosomes and 12 pairs of microchromosomes. A series of chromosomal rearrangements have become established in both size groups of the karyotype and are restricted to centromere shifts, probably caused by pericentric inversion. Species could be placed in one of six distinct karyotype groups which are differentiated by these rearrangements and whose grouping does not always correspond with the current taxonomy. An unusual sex chromosome system of the ZZjZW type was present in a number of the species examined.


Genetics ◽  
2003 ◽  
Vol 165 (4) ◽  
pp. 1745-1759 ◽  
Author(s):  
Juan J Infante ◽  
Kenneth M Dombek ◽  
Laureana Rebordinos ◽  
Jesús M Cantoral ◽  
Elton T Young

Abstract The relative importance of gross chromosomal rearrangements to adaptive evolution has not been precisely defined. The Saccharomyces cerevisiae flor yeast strains offer significant advantages for the study of molecular evolution since they have recently evolved to a high degree of specialization in a very restrictive environment. Using DNA microarray technology, we have compared the genomes of two prominent variants of S. cerevisiae flor yeast strains. The strains differ from one another in the DNA copy number of 116 genomic regions that comprise 38% of the genome. In most cases, these regions are amplicons flanked by repeated sequences or other recombination hotspots previously described as regions where double-strand breaks occur. The presence of genes that confer specific characteristics to the flor yeast within the amplicons supports the role of chromosomal rearrangements as a major mechanism of adaptive evolution in S. cerevisiae. We propose that nonallelic interactions are enhanced by ethanol- and acetaldehyde-induced double-strand breaks in the chromosomal DNA, which are repaired by pathways that yield gross chromosomal rearrangements. This mechanism of chromosomal evolution could also account for the sexual isolation shown among the flor yeast.


1987 ◽  
Vol 35 (6) ◽  
pp. 641 ◽  
Author(s):  
M King

Kluge (1967, 1983) proposed that the four subfamilies within the Gekkonidae were monophyletic assemblages, but that the Gekkoninae could be divided into two tribes on the basis of hyoid apparatus structure. Whilst agreeing that four subfamilies were present in the Gekkonidae, Moffatt (1973) argued that those groups of non-Eublepharine gekkos which remained after the differentiation of the Diplo- dactylinae and Sphaerodactylinae, and which had not become sufficiently distinct to be classified into separate subfamilies, had been lumped together as the Gekkoninae. Subsequently, Russell (1976, 1979) found that at least seven distinct groups could be defined within the Gekkoninae on the basis of toe structure. In the present paper I compare chromosomal evolution in the monophyletic Diplodactylinae and that in the possibly polyphyletic Gekkoninae, to test whether the tribal subdivision made by Kluge (1983) is valid, or whether this is a far more heterogeneous group as Russell and Moffatt proposed. The chromosomal data from 47 of the 92 species show that the Diplodactylinae have evolved from a 2n = 38 all acrocentric ancestral karyotype by the processes of pericentric inversion and centric fusion. In contrast, an analysis of 74 species from the Gekkoninae shows that eight distinct putative ancestral karyomorphs are present, 2n=32, 34, 36, 38, 40, 42, 44 and 46, each of which is acrocentric or telocentric. Numerous fusions, inversions, additions and tandem fusions have occurred within each of these categories. These data suggest that the Gekkoninae are a polyphyletic assemblage, and group comparisons indicate that there is some agreement with the morphogroups proposed by Russell (1976).


PLoS ONE ◽  
2021 ◽  
Vol 16 (10) ◽  
pp. e0258474
Author(s):  
Vergiana dos Santos Paixão ◽  
Pablo Suárez ◽  
Willam Oliveira da Silva ◽  
Lena Geise ◽  
Malcolm Andrew Ferguson-Smith ◽  
...  

Rhipidomys (Sigmodontinae, Thomasomyini) has 25 recognized species, with a wide distribution ranging from eastern Panama to northern Argentina. Cytogenetic data has been described for 13 species with 12 of them having 2n = 44 with a high level of autosomal fundamental number (FN) variation, ranging from 46 to 80, assigned to pericentric inversions. The species are grouped in groups with low FN (46–52) and high FN (72–80). In this work the karyotypes of Rhipidomys emiliae (2n = 44, FN = 50) and Rhipidomys mastacalis (2n = 44, FN = 74), were studied by classical cytogenetics and by fluorescence in situ hybridization using telomeric and whole chromosome probes (chromosome painting) of Hylaeamys megacephalus (HME). Chromosome painting revealed homology between 36 segments of REM and 37 of RMA. We tested the hypothesis that pericentric inversions are the predominant chromosomal rearrangements responsible for karyotypic divergence between these species, as proposed in literature. Our results show that the genomic diversification between the karyotypes of the two species resulted from translocations, centromeric repositioning and pericentric inversions. The chromosomal evolution in Rhipidomys was associated with karyotypical orthoselection. The HME probes revealed that seven syntenic probably ancestral blocks for Sigmodontinae are present in Rhipidomys. An additional syntenic block described here is suggested as part of the subfamily ancestral karyotype. We also define five synapomorphies that can be used as chromosomal signatures for Rhipidomys.


Genome ◽  
1988 ◽  
Vol 30 (3) ◽  
pp. 326-335 ◽  
Author(s):  
M. B. Qumsiyeh ◽  
R. D. Owen ◽  
R. K. Chesser

Data for nondifferentially stained chromosomes from 10 species of Rhinolophus (Chiroptera: Rhinolophidae) suggest a conserved chromosomal evolution. G-banded chromosomes for three well differentiated species (Rhinolophus hipposideros, Rhinolophus blasii, and Rhinolophus acuminatus) corroborate a low level of gross chromosomal rearrangements. Additionally, a comparison between G-banded chromosomes of Rhinolophus (Rhinolophidae) and Hipposideros (Hipposideridae) suggests extreme conservatism in chromosomal arms between these two distantly related groups. On the other hand, we report extensive genie divergence as assayed by starch gel electrophoresis among these 10 species, and between Rhinolophus and two hipposiderid genera (Hipposideros and Aselliscus). The present chromosomal data are not sufficient for phylogenetic analysis. Phylogenies based on electrophoretic data are in many aspects discordant with those based on the classical morphological criteria. Different (and as yet not clearly understood) evolutionary forces affecting chromosomal, morphologic, and electrophoretic variation may be the reason for the apparent lack of concordance in these independent data sets.Key words: Rhinolophidae, chromosomes, electrophoresis, phylogeny.


2021 ◽  
pp. 1-8
Author(s):  
Naiara P. Araújo ◽  
Radarane S. Sena ◽  
Cibele R. Bonvicino ◽  
Gustavo C.S. Kuhn ◽  
Marta Svartman

<i>Proechimys</i> species are remarkable for their extensive chromosome rearrangements, representing a good model to understand genome evolution. Herein, we cytogenetically analyzed 3 different cytotypes of <i>Proechimys</i> gr. <i>goeldii</i> to assess their evolutionary relationship. We also mapped the transposable element SINE-B1 on the chromosomes of <i>P.</i> gr. <i>goeldii</i> in order to investigate its distribution among individuals and evaluate its possible contribution to karyotype remodeling in this species. SINE-B1 showed a dispersed distribution along chromosome arms and was also detected at the pericentromeric regions of some chromosomes, including pair 1 and the sex chromosomes, which are involved in chromosome rearrangements. In addition, we describe a new cytotype for <i>P.</i> gr. <i>goeldii</i>, reinforcing the significant role of gross chromosomal rearrangements during the evolution of the genus. The results of FISH with SINE-B1 suggest that this issue should be more deeply investigated for a better understanding of its role in the mechanisms involved in the wide variety of <i>Proechimys</i> karyotypes.


1968 ◽  
Vol 10 (2) ◽  
pp. 263-275 ◽  
Author(s):  
K. Lesins ◽  
A. Erac

In crosses between the two taxa Medicago striata Bast, and M. littoralis Rohde a high mortality of gametes and seedlings, and sterility of some plants were noted which were not related to gross chromosomal rearrangements. Although the F1, F2 and F3 generations from reciprocal crosses differed in chlorophyll deficiencies (indicating a cytoplasmic influence) a genic cause became evident from segregations for chlorophyll characters in the F2 and F3. Transference of the cytoplasmic factor by the pollen is indicative.Segregation for pod coiling direction indicated that the character was determined by one or two genetic factors of which the clockwise coiling direction is recessive. The spininess appeared to be determined by one genetic factor, of which the spineless allele is recessive.On the basis of genetic differences (especially on the built-in repulsion systems for normal chlorophyll development of opposite species) the two taxa should be considered two different species.


2015 ◽  
Vol 146 (4) ◽  
pp. 296-305 ◽  
Author(s):  
Willam O. da Silva ◽  
Julio C. Pieczarka ◽  
Rogério V. Rossi ◽  
Horacio Schneider ◽  
Iracilda Sampaio ◽  
...  

Neacomys (Sigmodontinae) comprises 8 species mainly found in the Amazonian region. We describe 5 new karyotypes from Brazilian Amazonia: 2 cytotypes for N. paracou (2n = 56/FNa = 62-66), 1 for N. dubosti (2n = 64/FNa = 68), and 2 for Neacomys sp. (2n = 58/FNa = 64-70), with differences in the 18S rDNA. Telomeric probes did not show ITS. We provide a phylogeny using Cytb, and the analysis suggests that 2n = 56 with a high FNa is ancestral for the genus, as found in N. paracou, being retained by the ancestral forms of the other species, with an increase in 2n occurring independently in N. spinosus and N. dubosti. Alternatively, an increase in 2n may have occurred in the ancestral taxon of the other species, followed by independent 2n-reduction events in Neacomys sp. and in the ancestral species of N. tenuipes, N. guianae, N. musseri, and N. minutus. Finally, a drastic reduction event in the diploid number occurred in the ancestral species of N. musseri and N. minutus which exhibit the lowest 2n of the genus. The karyotypic variations found in both intra- and interspecific samples, associated with the molecular phylogeny, suggest a chromosomal evolution with amplification/deletion of constitutive heterochromatin and rearrangements including fusions, fissions, and pericentric inversions.


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