scholarly journals Phylogeography of southern brown and golden bandicoots: implications for the taxonomy and distribution of endangered subspecies and species

2018 ◽  
Vol 66 (6) ◽  
pp. 379 ◽  
Author(s):  
Steven J. B. Cooper ◽  
Kym Ottewell ◽  
Anna J. MacDonald ◽  
Mark Adams ◽  
Margaret Byrne ◽  
...  

Southern brown (Isoodon obesulus) and golden (Isoodon auratus) bandicoots are iconic Australian marsupials that have experienced dramatic declines since European settlement. Conservation management programs seek to protect the remaining populations; however, these programs are impeded by major taxonomic uncertainties. We investigated the history of population connectivity to inform subspecies and species boundaries through a broad-scale phylogeographic and population genetic analysis of Isoodon taxa. Our analyses reveal a major east–west phylogeographic split within I. obesulus/I. auratus, supported by both mtDNA and nuclear gene analyses, which is not coincident with the current species or subspecies taxonomy. In the eastern lineage, all Tasmanian samples formed a distinct monophyletic haplotype group to the exclusion of all mainland samples, indicative of long-term isolation of this population from mainland Australia and providing support for retention of the subspecific status of the Tasmanian population (I. o. affinis). Analyses further suggest that I. o. obesulus is limited to south-eastern mainland Australia, representing a significant reduction in known range. However, the analyses provide no clear consensus on the taxonomic status of bandicoot populations within the western lineage, with further analyses required, ideally incorporating data from historical museum specimens to fill distributional gaps.

2005 ◽  
Vol 62 (3) ◽  
pp. 505-517 ◽  
Author(s):  
Melania EA Cristescu ◽  
Paul DN Hebert

A spectacular adaptive radiation of crustaceans has occurred in the Black, Caspian, and Aral seas. This study tests several evolutionary scenarios based on the extent of genetic differentiation and the phylogenetic relationships among endemic mysids and gammarid amphipods from the Black and Caspian seas. Molecular phylogenies for these taxa were based on two mitochondrial genes: cytochrome c oxidase subunit I and the large ribosomal RNA subunit (16S), and one nuclear gene, the large ribosomal RNA subunit (28S). The results support the monophyly of the Ponto–Caspian gammarids (genera Dikerogammarus, Echinogammarus, Obesogammarus, and Pontogammarus), suggesting their origin from one colonization event. By contrast, several colonization events preceded the radiation of the Ponto–Caspian mysids (genera Limnomysis and Paramysis). Levels of intraspecific divergence were variable, with mysids showing either no geographic structure or deep genetic splits reflecting a long history of reproductive isolation between populations in marine settings and those in fresh waters. These findings suggest that the diversity of the Ponto–Caspian crustaceans has been underestimated and that species regarded as euryhaline are often composed of distinct evolutionary groups whose taxonomic status should be reevaluated.


2016 ◽  
Author(s):  
Michael S. Barker ◽  
Zheng Li ◽  
Thomas I. Kidder ◽  
Chris R. Reardon ◽  
Zhao Lai ◽  
...  

AbstractPremise of the studyLike many other flowering plants, members of the Compositae (Asteraceae) have a polyploid ancestry. Previous analyses found evidence for an ancient duplication or possibly triplication in the early evolutionary history of the family. We sought to better place this paleopolyploidy in the phylogeny and assess its nature.MethodsWe sequenced new transcriptomes for Barnadesia, the lineage sister to all other Compositae, and four representatives of closely related families. Using a recently developed algorithm, MAPS, we analyzed nuclear gene family phylogenies for evidence of paleopolyploidy.Key resultsWe found that the previously recognized Compositae paleopolyploidy is also in the ancestry of the Calyceraceae. Our phylogenomic analyses uncovered evidence for a successive second round of genome duplication among all sampled Compositae except Barnadesia.ConclusionsOur analyses of new samples with new tools provide a revised view of paleopolyploidy in the Compositae. Together with results from a high density Lactuca linkage map, our results suggest that the Compositae and Calyceraceae have a common paleotetraploid ancestor and most Compositae are descendants of a paleohexaploid. Although paleohexaploids have been previously identified, this is the first example where the paleotetraploid and paleohexaploid lineages have survived over tens of millions of years. The complex polyploidy in the ancestry of the Compositae and Calyceraceae represents a unique opportunity to study the long-term evolutionary fates and consequences of different ploidal levels.


2020 ◽  
Vol 57 (11) ◽  
pp. 1305-1311 ◽  
Author(s):  
Kelsey E. Nyland ◽  
Frederick E. Nelson

Cryoplanation terraces (CTs) are large (3000–800 000 m2) erosional landforms found in upland periglacial environments. Two hypotheses for the formation of CTs are supported in contemporary literature: (1) CT formation is controlled primarily by geologic structure; and (2) CTs are climatically controlled through nivation, a suite of erosional processes associated with late-lying snowbanks. A persistent question in periglacial geomorphology is whether nivation can produce CT-scale landforms. This paper examines the unusual deglaciation history of “Frost Ridge” on the Cathedral Massif, northwestern British Columbia, to estimate long-term denudation attributable to nivation processes active since the last glacial maximum. Frost Ridge forms one flank of an east–west-oriented glacial valley. During deglaciation, marginal drainage created V-shaped erosional notches on both valley walls. Minimization of solar radiation on the steep north-facing wall (Frost Ridge) allowed snowbanks to accumulate and persist in the marginal drainage features and nivation processes to erode the slope. Today, several large nivation hollows (incipient CTs) are present near the summit of Frost Ridge, while the V-shaped marginal drainage features are preserved at lower elevations and on the opposite, south-facing valley wall. A high-resolution survey using an unmanned aerial vehicle (UAV) allowed volumes of marginal drainage and incipient terrace features to be compared. Based on this volumetric comparison, denudation rates are estimated to range from 4.2 to 125.8 mm/kyr, which are comparable with relatively short-term nivation rates reported from Antarctica and mid-latitude alpine periglacial areas.


1998 ◽  
Vol 7 (3) ◽  
pp. 343-360 ◽  
Author(s):  
Frédéric Bozo

Thirty years after its adoption in December 1967, the Harmel report can be seen as a turning point in the history of the Alliance. By postulating NATO's compatibility with the changing nature of international relations, the report's conceptual framework provided an answer to the political dimension of the Alliance's mid-1960s crisis – which, fundamentally, was a crisis of legitimacy. From then on, NATO's increasingly active role in East–West relations would complement its original rationale – the defence of its members in the narrow sense – with a new one – the management of European security writ large, thus enhancing, for at least two decades, the Alliance's raison d'être as a whole. With the benefit of hindsight, the long-term significance of the Harmel report is, in fact, indisputable: how could NATO have survived the disappearance of the Soviet threat and the end of East–West conflict had it not been for the post-Cold War expansion of its ‘new tasks’ along the lines of the Harmel report?


Any sample of genes traces back to a single common ancestor. Each gene also has other properties: its sequence, its geographic location and the phenotype and fitness of the organism that carries it. With sexual reproduction, different genes have different genealogies, which gives us much more information, but also greatly complicates population genetic analysis. We review the close relation between the distribution of genealogies and the classic theory of identity by descent in spatially structured populations, and develop a simple diffusion approximation to the distribution of coalescence times in a homogeneous two-dimensional habitat. This shows that when neighbourhood size is large (as in most populations) only a small fraction of pairs of genes are closely related, and only this fraction gives information about current rates of gene flow. The increase of spatial dispersion with lineage age is thus a poor estimator of gene flow. The bulk of the genealogy depends on the long-term history of the population; we discuss ways of inferring this history from the concordance between genealogies across loci.


2020 ◽  
Vol 7 (3) ◽  
pp. 147-152
Author(s):  
Salman Ghaffari ◽  
◽  
Mehran Razavipour ◽  
Parastoo Mohammad Amini ◽  
◽  
...  

McCune-Albright Syndrome (MAS) is characterized by endocrinopathies, café-au-lait spots, and fibrous dysplasia. Bisphosphonates are the most prescribed treatment for reducing the pain but their long-term use has been associated with atypical fractures of cortical bones like femur in patients. We present a 23-year-old girl diagnosed with MAS. She had an atypical mid-shaft left femoral fracture that happened during simple walking. She also had a history of long-term use of alendronate. Because of the narrow medullary canal, we used 14 holes hybrid locking plate for the lateral aspect of the thigh to fix the fracture and 5 holes dynamic compression plate (instead of the intramedullary nail) in the anterior surface to double fix it, reducing the probability of device failure. With double plate fixation and discontinuation of alendronate, the complete union was achieved five months after surgery


Author(s):  
Johann P. Arnason

Different understandings of European integration, its background and present problems are represented in this book, but they share an emphasis on historical processes, geopolitical dynamics and regional diversity. The introduction surveys approaches to the question of European continuities and discontinuities, before going on to an overview of chapters. The following three contributions deal with long-term perspectives, including the question of Europe as a civilisational entity, the civilisational crisis of the twentieth century, marked by wars and totalitarian regimes, and a comparison of the European Union with the Habsburg Empire, with particular emphasis on similar crisis symptoms. The next three chapters discuss various aspects and contexts of the present crisis. Reflections on the Brexit controversy throw light on a longer history of intra-Union rivalry, enduring disputes and changing external conditions. An analysis of efforts to strengthen the EU’s legal and constitutional framework, and of resistances to them, highlights the unfinished agenda of integration. A closer look at the much-disputed Islamic presence in Europe suggests that an interdependent radicalization of Islamism and the European extreme right is a major factor in current political developments. Three concluding chapters adopt specific regional perspectives. Central and Eastern European countries, especially Poland, are following a path that leads to conflicts with dominant orientations of the EU, but this also raises questions about Europe’s future. The record of Scandinavian policies in relation to Europe exemplifies more general problems faced by peripheral regions. Finally, growing dissonances and divergences within the EU may strengthen the case for Eurasian perspectives.


2019 ◽  
Author(s):  
Ayesha Shaikh ◽  
Natasha Shrikrishnapalasuriyar ◽  
Giselle Sharaf ◽  
David Price ◽  
Maneesh Udiawar ◽  
...  

Diabetes ◽  
2020 ◽  
Vol 69 (Supplement 1) ◽  
pp. 1386-P
Author(s):  
SYLVIA E. BADON ◽  
FEI XU ◽  
CHARLES QUESENBERRY ◽  
ASSIAMIRA FERRARA ◽  
MONIQUE M. HEDDERSON

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