Flies, endemicity, and the Atlantic Forest: a biogeographical study using topographic units of analysis

2017 ◽  
Vol 30 (6) ◽  
pp. 439 ◽  
Author(s):  
Dalton S. Amorim ◽  
Charles M. D. Santos
Keyword(s):  
Atlantic Forest ◽  
Data Matrix ◽  
Parsimony Analysis ◽  
Semideciduous Forest ◽  
Units Of Analysis ◽  
Separate Area ◽  
Areas Of Endemism ◽  
Northern Atlantic ◽  
Semideciduous Seasonal Forest ◽  
Ombrophilous Forest

We present a study of the endemicity patterns in the Brazilian Atlantic Forest on the basis of the distribution of 107 fly species belonging to 24 genera of 15 families. This is the first picture of endemism for Diptera in the Atlantic Forest. Instead of the traditional grid of geographical coordinates, we used a system of topographic units (TUs) for the analysis, delimited after gathering information on rivers and altitude for each state and country. A parsimony analysis of the data matrix with the species records for the TUs was performed, named topographic-unit parsimony analysis (TUPA). The same distributional data was used in a NDM/VNDM analysis. The combination of the resulting patterns from both analyses indicated the existence of the following three major areas of endemism for flies in the Atlantic Forest: a Northern Atlantic Forest, north of Rio Doce; a Southern Atlantic Forest, south of Rio Doce along the coast, extending to the west and to the south at the level of the state of Paraná; and a Semideciduous Seasonal Forest, west to the ombrophilous forest along the coast. None of these areas seems to be shaped solely by vicariance events. They can possibly be the result of biotic fusion of ancestral areas of endemism as a result of barrier collapse and secondary overlap of sister biotas, a hypothesis yet to be tested. The recognition of a separate area of endemism for flies in the Semideciduous Forest agrees with phytogeographical reconstructions and raises an important alert for the scarcity of biological reserves for this vegetation.

scholarly journals Detection of areas of endemism on two spatial scales using Parsimony Analysis of Endemicity (PAE): the Neotropical region and the Atlantic Forest

2008 ◽  
Vol 8 (4) ◽  
pp. 33-42 ◽  
Author(s):  
Mário Sérgio Sigrist ◽  
Claudio José Barros de Carvalho
Keyword(s):  
Atlantic Forest ◽  
Spatial Scales ◽  
Distribution Patterns ◽  
Neotropical Region ◽  
Conservation Priorities ◽  
Parsimony Analysis ◽  
Areas Of Endemism ◽  
Endemic Areas ◽  
Analysis Scale ◽  
Parsimony Analysis Of Endemicity

An important biological challenge today is the conservation of biodiversity. Biogeography, the study of the distribution patterns of organisms, is an important tool for this challenge. Endemism, the co-occurrence of several species unique to the same area, has important implications for the preservation of biodiversity, since many areas of endemism are also areas with large human impact. More rigorously defined, areas of endemism are historical units of distributional congruence of monophyletic taxa. These areas often assumed to be due to nonrandom historical events that favored conditions associated with high rates of speciation. Thus, understanding endemism and the delimitation of endemic areas has important implications for conservation. Today, most studies delimit areas of endemism by superimposing maps of distribution for various species. This approach suffers from arbitrary delimitations, however, when a great distributional data is used. In this paper we used the method of Parsimony Analysis of Endemicity (PAE) based on georeferenced quadrats in order to delimit areas of endemism. This modality of the method is important due to its testable nature and can also be used to infer area relationships. We applied the method to raw distributional data from 19 unrelated taxa to delimit general patterns of endemism in the Neotropical Region and in the Atlantic forest domain using different grid scales. Neotropical areas found are comprised over the Panama region, northern Andean region and the Atlantic forest. Atlantic forest showed a major division into two distinct components (northern x southern). Endemic areas delimited using smaller scale grids on the Atlantic forest should be considered for conservation priorities once they showed endemism at regional and local scales. The results were also compared to other studies using different taxa and methods. Finally, some considerations on the analysis scale and future perspectives of the method are presented.

scholarly journals Historical relationships among areas of endemism in the tropical South America using Brooks Parsimony Analysis (BPA)

2009 ◽  
Vol 9 (4) ◽  
pp. 79-90 ◽  
Author(s):  
Mário Sérgio Sigrist ◽  
Claudio José Barros de Carvalho
Keyword(s):  
Atlantic Forest ◽  
Parsimony Analysis ◽  
Monophyletic Cluster ◽  
Influence Area ◽  
Historical Factors ◽  
Areas Of Endemism ◽  
History Of ◽  
Endemic Areas ◽  
Biogeographical Analysis ◽  
Area Classification

Areas of endemism are the smallest units of biogeographical analysis. One of its definitions is that these areas harbor organisms with restricted distributions caused by non random historical factors. The aim of this study was to examine historical relationships among areas of endemism in the Neotropics using Brooks Parsimony Analysis (BPA). We applied BPA to 12 unrelated taxa distributed within two sets of endemic areas in order to: (1) compare the proposed endemic area classifications; (2) examine whether Amazonia and Atlantic Forest are true biogeographic units and, (3) examine whether the inclusion of open area formations influence area relationships of the surrounding forests. General area cladograms revealed a basal split between Amazonian and Atlantic forests, suggesting that these areas have been isolated for a long period of time. All Atlantic forest endemic areas formed a monophyletic cluster, showing a sequence of vicariant events from north to south. The hypothesis that Amazonia is a composite area, made up of different historical units, is herein corroborated. When Cerrado and Caatinga (grasslands and savannas) are included, internal area relationships within Amazonia change, indicating that area classification schemes comprising forests and open formations should be preferred given the complementary history of these areas.

Rediscovery of Turnera pernambucensis (Passifloraceae s.l.) in the northern Atlantic Forest and an update for its description

Phytotaxa ◽  
2016 ◽  
Vol 286 (3) ◽  
pp. 177 ◽  
Author(s):  
ANDRÉIA ZELENSKI ◽  
LAMARCK ROCHA ◽  
RAFAEL B. LOUZADA
Keyword(s):  
Atlantic Forest ◽  
Morphological Variation ◽  
Related Species ◽  
Conservation Status ◽  
Type Specimen ◽  
Brazilian Atlantic Forest ◽  
Ecological Information ◽  
Northern Atlantic ◽  
Semideciduous Seasonal Forest ◽  
Extant Population

Turnera pernambucensis is a shrub endemic to the Brazilian Atlantic Forest previously known only from the type specimen collected 179 years ago. An extant population was found in semideciduous seasonal forest in the state of Pernambuco and new morphological and ecological information is presented here. Illustrations, conservation status and comments about its morphological variation are also provided, as well as a discussion about similarities with morphologically related species of the series Capitatae.

iTUPA: an online automated application to perform Topographic-Unit Parsimony Analysis

2019 ◽  
Vol 35 (22) ◽  
pp. 4818-4820
Author(s):  
Muhsen Hammoud ◽  
Charles Morphy D Santos ◽  
João Paulo Gois
Keyword(s):  
Biodiversity Conservation ◽  
Atlantic Forest ◽  
Google Earth ◽  
Brazilian Atlantic Forest ◽  
Parsimony Analysis ◽  
High Definition ◽  
Online Application ◽  
Web Framework ◽  
Areas Of Endemism ◽  
Species Occurrences

Abstract Summary iTUPA is a free online application for automatizing the Topographic-Unit Parsimony Analysis (TUPA), which identifies areas of endemism based on topography. iTUPA generates species-occurrences matrices based on user-defined topographic units (TUs) and provides a parsimony analysis of the generated matrix. We tested iTUPA after a proposal of regionalization for the Brazilian Atlantic Forest. iTUPA can handle millions of species registers simultaneously and uses Google Earth high-definition maps to visually explore the endemism data. We believe iTUPA is a useful tool for further discussions on biodiversity conservation. Availability and implementation iTUPA is hosted on Google cloud and freely available at http://nuvem.ufabc.edu.br/itupa. iTUPA is implemented using R (version 3.5.1), with RStudio 1.1.453 used as the implementation IDE, Shiny 1.1.0 web framework, and Google Maps® API version 3.36.

scholarly journals Fish fauna of headwater streams of Perobas Biological Reserve, a conservation unit in the Atlantic Forest of the Northwestern Paraná state, Brazil

Check List ◽  
2013 ◽  
Vol 9 (3) ◽  
pp. 549 ◽  
Author(s):  
Rosilene Luciana Delariva ◽  
Jislaine Cristina da Silva
Keyword(s):  
New Species ◽  
River Basin ◽  
Atlantic Forest ◽  
Fish Fauna ◽  
Conservation Unit ◽  
Upper Paraná River ◽  
Semideciduous Seasonal Forest ◽  
Ombrophilous Forest ◽  
First Time ◽  
Biological Reserve

The Perobas Biological Reserve is a Conservation Unit characterized by two physiognomies of the Atlantic Forest: Semideciduous Seasonal Forest and Mixed Ombrophilous Forest. The reserve is situated on a ridge watershed between the basins of the Piquiri and Ivaí rivers, Upper Paraná River and had its fish fauna surveyed for the first time. Fishes were collected quarterly from December 2010 to March 2012, using electrofishing in five stretches of 50 m along the four streams, and gillnets only at one site in December, 2010. A total of 2628 individual were collected, belonging to 34 species in 25 genera, 13 families and six orders. Ten taxa may be new species or part of a complex of species within each genus, and requiring more detailed taxonomic revisions. Nine species are the first records for the Piquiri river basin.

Bird distributional patterns support biogeographical histories and are associated with bioclimatic units in the Atlantic Forest, Brazil

Zootaxa ◽  
2017 ◽  
Vol 4337 (2) ◽  
pp. 223 ◽  
Author(s):  
CRISTIANO DE SANTANA CARVALHO ◽  
NAYLA FÁBIA FERREIRA DO NASCIMENTO ◽  
HELDER F. P. DE ARAUJO
Keyword(s):  
Multivariate Analysis ◽  
Atlantic Forest ◽  
Analysis Of Variance ◽  
Forest Birds ◽  
Distributional Pattern ◽  
Parsimony Analysis ◽  
Multivariate Analysis Of Variance ◽  
Distributional Patterns ◽  
Parsimony Analysis Of Endemicity

Rivers as barriers to dispersal and past forest refugia are two of the hypotheses proposed to explain the patterns of biodiversity in the Atlantic Forest. It has recently been shown that possible past refugia correspond to bioclimatically different regions, so we tested whether patterns of shared distribution of bird taxa in the Atlantic Forest are 1) limited by the Doce and São Francisco rivers or 2) associated with the bioclimatically different southern and northeastern regions. We catalogued lists of forest birds from 45 locations, 36 in the Atlantic forest and nine in Amazon, and used parsimony analysis of endemicity to identify groups of shared taxa. We also compared differences between these groups by permutational multivariate analysis of variance and identified the species that best supported the resulting groups. The results showed that the distribution of forest birds is divided into two main regions in the Atlantic Forest, the first with more southern localities and the second with northeastern localities. This distributional pattern is not delimited by riverbanks, but it may be associated with bioclimatic units, surrogated by altitude, that maintain current environmental differences between two main regions on Atlantic Forest and may be related to phylogenetic histories of taxa supporting the two groups. 

scholarly journals The genera Turnera and Piriqueta (Passifloraceae sensu lato) in the state of Pernambuco, Brazil

Rodriguésia ◽  
2019 ◽  
Vol 70 ◽  
Author(s):  
Andréia Zelenski ◽  
Rafael Louzada
Keyword(s):  
Species Richness ◽  
Atlantic Forest ◽  
New Record ◽  
National Park ◽  
The State ◽  
Northeastern Brazil ◽  
Distribution Maps ◽  
Taxonomic Treatment ◽  
Semideciduous Seasonal Forest ◽  
First Time

Abstract A taxonomic treatment of the genera Turnera and Piriqueta in the state of Pernambuco, northeastern Brazil, is presented. Fourteen species of Turnera and six species of Piriqueta were found in the Atlantic Forest and Caatinga, of which nine are endemic to Brazil. Turnera pernambucensis is threatened and restricted to the Atlantic Forest of Pernambuco, while T. joelii is a new record for the state. The species predominate in steppe savanna and semideciduous seasonal forest, but several of them grow naturally in anthropized areas. Catimbau National Park is the locality with the highest species richness. Tristyly is recorded for the first time in Piriqueta guianensis. Identification keys, descriptions, illustrations, distribution maps, and comments about habitat, flowering, fruiting, and morphological relationships are provided.

scholarly journals Amaioua longipedicellata (Rubiaceae, Gardenieae), a new species from the Brazilian Atlantic coast

2019 ◽  
Vol 152 (1) ◽  
pp. 84-92
Author(s):  
Piero G. Delprete ◽  
Jomar G. Jardim
Keyword(s):  
New Species ◽  
Atlantic Forest ◽  
Atlantic Coast ◽  
Morphological Characters ◽  
Herbarium Specimens ◽  
Similar Species ◽  
Field Observations ◽  
Undescribed Species ◽  
Semideciduous Forest ◽  
A New Species

Background – Ongoing studies of Brazilian Rubiaceae revealed an undescribed species of Amaioua endemic to Atlantic Forest (Restinga and Semideciduous forest) of the state of Bahia, which is here described and illustrated, and its morphological characters are discussed and compared with those of similar species. Methods – This study is based on examinations of herbarium specimens, samples preserved in 60% ethanol, field observations, and digital images. Herbarium specimens of the CAY, CEPEC, HBR, IBGE, K, MBM, NY, RB, U, UB, UFG, and US herbaria were directly studied. Additional images of herbarium specimens were studied online. Results – Amaioua longipedicellata Delprete & J.G.Jardim is here described, illustrated and compared with the two most similar species, i.e., A. glomerulata (Lam. ex Poir.) Delprete & C.H.Perss. and A. intermedia Mart. A table comparing the morphological characters of these three species, and an appendix with selected specimens studied of A. glomerulata and A. intermedia are included.

scholarly journals The effect of fragmentation on spider richness (Arachnida: Araneae) in montane semideciduous seasonal forest

2021 ◽  
Vol 12 (4) ◽  
Author(s):  
Flávio Eduardo Vilas Boas Júnior ◽  
Amanda Da Silva Ferreira ◽  
Marcos Magalhães De Souza
Keyword(s):  
Species Richness ◽  
Atlantic Forest ◽  
Minas Gerais ◽  
Fragmentation Process ◽  
Natural Environments ◽  
Forest Fragments ◽  
Spider Species ◽  
Semideciduous Seasonal Forest ◽  
Agricultural Areas ◽  
Environmental Functions

The fragmentation process that has altered natural environments has been widely discussed, as it causes changes in communities and compromises different environmental functions. In this sense, this study was based on the evaluation of fragmentation on araneofauna of semideciduous seasonal forest fragments, phytophysiognomy belonging to the Atlantic Forest. The study was conducted in three fragments in the municipality of Inconfidentes, southern Minas Gerais, from April 2014 to March 2015. The results showed that there is a similarity in the composition of spider species among the sampled fragments and that the size of the fragment is positively correlated with species richness. Our data show that smaller fragments must be preserved and that agricultural areas maintain the integrity of adjacent forest areas to benefit from the predation dynamics that spiders exert on pests that affect plantations.

Catalogue of distribution of lizards (Reptilia: Squamata) from the Brazilian Amazonia. III. Anguidae, Scincidae, Teiidae

Zootaxa ◽  
2016 ◽  
Vol 4205 (5) ◽  
pp. 401 ◽  
Author(s):  
MARCO A. RIBEIRO-JÚNIOR ◽  
SILVANA AMARAL
Keyword(s):  
Species Level ◽  
Distribution Data ◽  
Semideciduous Forest ◽  
Brazilian Amazonia ◽  
Disjunct Populations ◽  
Areas Of Endemism ◽  
Gallery Forests ◽  
Present Distribution ◽  
Southwestern Amazonia ◽  
Area Data

We present distribution data of all Anguidae, Scincidae, and Teiidae lizards known from the Brazilian Amazonia, totaling 29 species-level taxa, belonging to 14 genera. This represents 11 more species-level taxa than previously reported for these families in this area. Data were based on literature and 46,806 specimens deposited in three North American and eight Brazilian museums, including the main collections harboring Amazonian material. Most species (~55%) are endemic to Amazonia. Except for Ameiva ameiva, that is present in several environments and domains, non-endemic species are either associated with open dry (semideciduous) forest or open vegetation (savanna) enclaves in Amazonia, occupying similar environments outside Amazonia, gallery forests within the Cerrado, or present disjunct populations in the Atlantic Forest. As a whole, six taxa are widespread in Amazonia, four are restricted to eastern Amazonia, four to western Amazonia, three to southwestern Amazonia, one to northern Amazonia, and seven to the southern peripheral portion of Amazonia. Besides, two species present apparently more restricted, unique distributions. Only three species have a distribution that is congruent with one of the areas of endemism (AE) recognized for other organisms (birds and primates), of which two occur in AE Guiana and one in AE Inambari. 

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