The influence of the soil matrix on nitrogen mineralisation and nitrification. II. The pore system as a framework for mapping the organisation of the soil matrix

Soil Research ◽  
1998 ◽  
Vol 36 (5) ◽  
pp. 855 ◽  
Author(s):  
D. T. Strong ◽  
P. W. G. Sale ◽  
K. R. Helyar

Large numbers of small undisturbed soil volumes (1·7 cm3 ) were collected from the surface layer of a 2 m by 3 m field plot on a red earth near Wagga Wagga, New South Wales. The hypothesis tested was that an analysis of relationships between the volume of different pore size classes and various soil properties, measured on these soil volumes, can provide an understanding of soil organisation within the framework of the pore system. Three discrete findings were presented in confirmation of the hypothesis. (1) A non-uniform distribution of organic N through the pore system was indicated by the data analysis. Soil organic N tended to be concentrated in pores <0·6 µm and in pores 10-30 µm, but not in the intermediate pore size class (pores 0·6-10 µm). Concentrations of organic N in pores <0·6 µm are probably because of physical protection from microbial decomposition, but concentrations of organic N in pores 10-30 µm are probably because these pores are infrequently water-filled, and this limits bacterial activity more severely than in the pores 0·6-10 µm. Currently available assays for potentially mineralisable N cannot account for the effect of substrate location within the pore system, and a characterisation of the soil for the distribution of N in pores may enhance their utility. Soil disturbance is likely to alter organic matter distribution through the pore system and alter mineralisation dynamics. (2) Observations of pore size distributions before and after wetting suggested that soils which were high in organic matter and clay tended to have a greater volume of pores 0 ·6-30 µm which are unstable to drying and rewetting. It is proposed that these unstable pores 0 ·6-30 µm had been produced by the movement and alignment of clay particles during the growth of microbial colonies. (3) The volume of pores <0·6 µm had a relatively strong negative correlation with pH and a relatively strong positive correlation with Mn2+ . A mechanism based on redox chemistry principles was proposed to explain these relationships. It was suggested that the volume of pores <0·6 µm is related to the potential anaerobicity of the soil volume. In anaerobic conditions, the terminal electron acceptor for organic C oxidation may be MnO2 instead of O2, and in these circumstances, considerably more H+ would be consumed than in aerobic conditions. It is suggested that this alkaline effect extends into regions of the matrix where N mineralisation and nitrification are occurring, and stimulates these processes. The greater nitrification which may result from such a chain of events may, over time, effect greater acidification in those soil volumes which have greater microporosity.

Soil Research ◽  
1999 ◽  
Vol 37 (1) ◽  
pp. 137 ◽  
Author(s):  
D. T. Strong ◽  
P. W. G. Sale ◽  
K. R. Helyar

Regression analysis was used to examine the importance of organic nitrogen (%N), soil water content (θv), soil pH, and C: N ratio for predicting N mineralisation in a small field plot. Undisturbed soil cubes (c. 1·7 cm3) were collected from the soil surface and received treatments of drying and rewetting, urea, substrate derived from clover leachate, or no amendment, and were incubated at either –10 or –30 kPa for 20 days. The data confirm the hypothesis that within a small field plot, θv and %N explain most of the variation in net N mineralisation and nitrification. The pore size classes of 0·6–10 and 10–30 µm made disproportionately small and large contributions to N mineralisation, respectively, apparently due to non-uniform distribution of organic N through the pore system. When soluble N substrate was added to the soils, both these pore classes appeared to support mineralisation. We concluded that prior to sampling, the microbial biomass had been more active in the pores 0·6–10 µm, and had nearly exhausted the organic substrates in this pore class, whereas this was not so for the 10–30 µm pore class. Drying and rewetting increased the importance of %N as a predictor of N mineralisation, probably because this treatment disrupted physical protective mechanisms of organic N. Soil pH was generally not a useful predictor of N mineralisation and often seemed to be a dependent rather than an independent variable in relation to nitrification. Neither was C: N ratio a useful predictor of N transformation processes, and this was probably related to physical regulatory mechanisms in the soil.


2014 ◽  
Vol 3 (3) ◽  
pp. 50
Author(s):  
Habib Kato ◽  
Robert Mulebeke ◽  
Felix Budara Bareeba ◽  
Elly Nyambobo Sabiiti

<p>Soil organic carbon (C) and nitrogen (N) decomposition in fecal manure of cattle fed browses of Calliandra (<em>Calliandra calothyrsus</em>), Gliricidia (<em>Gliricidia sepium</em>) and Leucaena (<em>Leucaena leucocephala</em>) browse/maize silage mixtures and maize (<em>Zea mays</em>) silage alone when applied to the soil were investigated in a pot experiment in comparison to the corresponding silages fed. Maize silage alone had the lowest N and a larger C: N ratio, making it a poor quality compost when applied to the soil, but compared to the browse/maize silage mixtures it had the highest level of soluble N as non-protein nitrogen (NPN) which makes much of its N available for soil microbial decomposition of its organic C. Calliandra browse/maize silage mixture had the highest level of fiber-bound N (ADFN), which reduces N availability for soil microbial decomposition of its organic C in spite of its high N content and a narrower C: N ratio. Fecal manure from maize silage alone had a lower level of N and a wider C: N ratio than fecal manure from the other silages fed which would affect its decomposition in the soil, but it had the lowest level of ADFN and much of its N is made available for soil microbial decomposition of its organic C. Soil samples after 12 weeks of the experiment showed that Calliandra browse/maize silage mixture maintained the highest level of C in the soil, while maize silage alone maintained the lowest level. Also soils treated with fecal manure from the other browse/maize silage mixtures maintained higher levels of C than fecal manure from maize silage alone. Organic C levels were lowest at 8 weeks of the experiment for all treatments and rose to the original levels at 12 weeks which could have been as a result of biotic and hydrologic factors coupled with soil aggregation. Decomposition of organic N followed a similar trend as organic C. The two elements are linked in both plant inputs in the soil and in the eventual soil humic substances. The soils treated with browse/maize silage mixtures maintained C: N ratios that were similar to that of the control soil and higher than those of the fecal manure treatments. Thus, in spite of the added silage materials to the soil, rapid decomposition of organic C could not occur to reflect benefits of adding the silage materials to the soil. Thus, fecal manure, particularly from feeding animals on browse/forage diets is more beneficial in the soil as it would decompose more readily releasing the plant nutrients they contain.</p>


Soil Research ◽  
2013 ◽  
Vol 51 (1) ◽  
pp. 14 ◽  
Author(s):  
Liesbeth Bouckaert ◽  
Steven Sleutel ◽  
Denis Van Loo ◽  
Loes Brabant ◽  
Veerle Cnudde ◽  
...  

Soil pore network effects on organic matter turnover have, until now, been studied indirectly because of lack of data on the 3D structure of the pore network. Application of X-ray computed tomography (X-ray CT) to quantify the distribution of pore neck size and related pore sizes from undisturbed soil cores, with simultaneous assessment of carbon (C) mineralisation, could establish a relationship between soil organic matter (SOM) decomposition and soil pore volumes. Eighteen miniature soil cores (diameter 1.2 cm, height 1.2 cm) covering a range of bulk densities were incubated at 20°C for 35 days. Respiration was modelled with a parallel first- and zero-order kinetic model. The cores were scanned at 9.44 µm resolution using an X-ray CT scanner developed in-house. Correlation analysis between the slow pool C mineralisation rate, ks, and pore volume per pore neck class yielded significant (P < 0.05) positive correlations: r = 0.572, 0.598, and 0.516 for the 150–250, 250–350, and >350 µm pore neck classes, respectively. Because larger pores are most probably mainly air-filled, a positive relation with ks was ascribed to enhanced aeration of smaller pores surrounding large pores. The weak and insignificant relationship between the smallest pore neck class (<9.44 µm) and ks could be explained by obstructed microbial activity and mobility or diffusion of exo-enzymes and hydrolysis products as a result of limited oxygen availability. This study supports the hypothesis that the impact of soil structure on microbial processes occurs primarily via its determination of soil water distribution, which is possibly the main driver for the location of C mineralisation in the soil matrix.


2011 ◽  
Vol 35 (4) ◽  
pp. 1141-1149 ◽  
Author(s):  
Sérgio Ricardo Silva ◽  
Ivo Ribeiro da Silva ◽  
Nairam Félix de Barros ◽  
Eduardo de Sá Mendonça

The use of machinery in agricultural and forest management activities frequently increases soil compaction, resulting in greater soil density and microporosity, which in turn reduces hydraulic conductivity and O2 and CO2 diffusion rates, among other negative effects. Thus, soil compaction has the potential to affect soil microbial activity and the processes involved in organic matter decomposition and nutrient cycling. This study was carried out under controlled conditions to evaluate the effect of soil compaction on microbial activity and carbon (C) and nitrogen (N) mineralization. Two Oxisols with different mineralogy were utilized: a clayey oxidic-gibbsitic Typic Acrustox and a clayey kaolinitic Xantic Haplustox (Latossolo Vermelho-Amarelo ácrico - LVA, and Latossolo Amarelo distrófico - LA, respectively, in the Brazil Soil Classification System). Eight treatments (compaction levels) were assessed for each soil type in a complete block design, with six repetitions. The experimental unit consisted of PVC rings (height 6 cm, internal diameter 4.55 cm, volume 97.6 cm³). The PVC rings were filled with enough soil mass to reach a final density of 1.05 and 1.10 kg dm-3, respectively, in the LVA and LA. Then the soil samples were wetted (0.20 kg kg-1 = 80 % of field capacity) and compacted by a hydraulic press at pressures of 0, 60, 120, 240, 360, 540, 720 and 900 kPa. After soil compression the new bulk density was calculated according to the new volume occupied by the soil. Subsequently each PVC ring was placed within a 1 L plastic pot which was then tightly closed. The soils were incubated under aerobic conditions for 35 days and the basal respiration rate (CO2-C production) was estimated in the last two weeks. After the incubation period, the following soil chemical and microbiological properties were detremined: soil microbial biomass C (C MIC), total soil organic C (TOC), total N, and mineral N (NH4+-N and NO3--N). After that, mineral N, organic N and the rate of net N mineralization was calculated. Soil compaction increased NH4+-N and net N mineralization in both, LVA and LA, and NO3--N in the LVA; diminished the rate of TOC loss in both soils and the concentration of NO3--N in the LA and CO2-C in the LVA. It also decreased the C MIC at higher compaction levels in the LA. Thus, soil compaction decreases the TOC turnover probably due to increased physical protection of soil organic matter and lower aerobic microbial activity. Therefore, it is possible to conclude that under controlled conditions, the oxidic-gibbsitic Oxisol (LVA) was more susceptible to the effects of high compaction than the kaolinitic (LA) as far as organic matter cycling is concerned; and compaction pressures above 540 kPa reduced the total and organic nitrogen in the kaolinitic soil (LA), which was attributed to gaseous N losses.


2008 ◽  
Author(s):  
Asher Bar-Tal ◽  
Paul R. Bloom ◽  
Pinchas Fine ◽  
C. Edward Clapp ◽  
Aviva Hadas ◽  
...  

Objectives - The overall objective of this proposal was to explore the effects of soil properties and management practices on C sequestration in soils and off-site losses of N.The specific objectives were: 1. to investigate and to quantify the effects of soil properties on C transformations that follow OW decomposition, C losses by gaseous emission, and its sequestration by organic and mineral components of the soil; 2. to investigate and to quantify the effects of soil properties on organic N mineralization and transformations in soil, its losses by leaching and gaseous emission; 3. to investigate and to quantify the effects of management practices and plants root activity and decomposition on C and N transformations; and 4. to upgrade the models NCSOIL and NCSWAP to include inorganic C and root exudation dynamics. The last objective has not been fulfilled due to difficulties in experimentally quantification of the effects of soil inorganic component on root exudation dynamics. Objective 4 was modified to explore the ability of NCSOIL to simulate organic matter decomposition and N transformations in non- and calcareous soils. Background - Rates of decomposition of organic plant residues or organic manures in soil determine the amount of carbon (C), which is mineralized and released as CO₂ versus the amount of C that is retained in soil organic matter (SOM). Decomposition rates also greatly influence the amount of nitrogen (N) which becomes available for plant uptake, is leached from the soil or lost as gaseous emission, versus that which is retained in SOM. Microbial decomposition of residues in soil is strongly influenced by soil management as well as soil chemical and physical properties and also by plant roots via the processes of mineral N uptake, respiration, exudation and decay.


1967 ◽  
Vol 47 (2) ◽  
pp. 111-116 ◽  
Author(s):  
F. J. Sowden ◽  
M. Schnitzer

Organic matter (O.M.) was extracted with 0.5 N NaOH under N2, from samples of the Bh horizon of a Podzol soil. The NaOH-soluble O.M. from one sample was partitioned into "classical" humic and fulvic acids. The O.M. extracted from other samples was passed over an H-resin and purified fulvic acid" was prepared from the eluate. The O.M. retained on the resin was eluted with base. After hydrolysis a sample of the original soil the NaOH-insoluble residue and the various O.M. preparations were analyzed for amino acids, amino sugars and ammonia.Eighty percent of the amino acids in the original soil were accounted for in the NaOH-insoluble residue plus the purified fulvic acid and the NH4OH eluate. Most of the soil amino acids were recovered in the NaOH-insoluble residue plus classical humic plus classical fulvic acid fractions. Qualitatively, the amino acid distribution in all fractions was similar to the distribution or amino acids in an "average" protein. Amounts of amino sugars were small consisting of two-thirds glucosamine and one-third galactosamine. Recoveries of amino sugars were low, possibly due to the effect of alkali.Slightly more than 50% of the soil-N was accounted for as amino acids plus NH3 plus amino sugars. The behavior of the fraction on the exchange resin suggested that the organic C- organic N-system extracted from the soil was not uniform, and that at least portions of the ammo acids and amino sugars were either adsorbed on or physically mixed with organic matter.


Soil Research ◽  
1987 ◽  
Vol 25 (1) ◽  
pp. 95 ◽  
Author(s):  
M Amato ◽  
JN Ladd ◽  
A Ellington ◽  
G Ford ◽  
JE Mahoney ◽  
...  

14C- and 15N-labelled wheat straw, and tops or roots of a pasture legume (either Medicago littoralis or Trifolium subterraneum) were incorporated into topsoils at 12 field sites in southern Australia. These sites were representative of soil types widely used for wheat growing in each region. The soils varied markedly in their physical and chemical properties (e.g. pH, texture and organic matter content). Based on amounts of residual I4C (averaged for all sites), the legume tops decomposed more extensively than did wheat straw, especially soon after incorporation. To a lesser extent the legume tops decomposed more extensively than legume roots, and T. subterraneum tops more than M. littoralis tops; root decomposition for both legumes was similar. For example, after 1 year, the residual organic 14C from wheat straw, M. littoralis tops, T. subterraneum tops and legume roots accounted for 48%, 41%, 38% and 54% of their respective inputs. After two years, residual 14C of wheat straw accounted for 30% of the input. Differences in decomposition due to climate and soil properties were generally small, but at times were statistically significant; these differences related positively with rainfall and negatively with soil clay content, but showed no relationship with pH or soil organic C and N. Some N was mineralized from all plant materials, the greatest from legume tops, the least from wheat straw. After 1 year, residual organic 15N accounted for 56%, 63% and 78% respectively of input l5N from legume tops and roots and from wheat straw. The influence of climate and soil properties on amounts of residual organic I5N was small and generally was consistent with those found for residual 14C. AS an exception, the residual organic 15N from wheat straw was negatively related to soil organic N levels, whereas residual I5N of legume tops and roots and residual 14C of all plant materials were not influenced by soil organic matter levels. These results are discussed in terms of the turnover of N in soils amended with isotope labelled plant materials of different available C:N ratios.


Soil Research ◽  
2010 ◽  
Vol 48 (1) ◽  
pp. 16 ◽  
Author(s):  
Mohammed Abdul Kader ◽  
Steven Sleutel ◽  
Karoline D'Haene ◽  
Stefaan De Neve

Reduced tillage (RT) management may increase surface soil organic carbon (SOC) and nitrogen (N), particularly due to accumulation of labile organic matter (OM). We investigated the effect of RT compared with conventional tillage (CT) on the distribution of SOC and N over different soil fractions from 7 pairs of fields with cereal–root crop rotations, in the Belgian loess belt. Surface soil samples (0–100 mm) were physically fractionated according to a sequential sieving and density separation method into stable microaggregates, silt and clay, and free and occluded particulate OM fractions. RT management was previously found effective in increasing the organic C and organic N content of the surface soil (0–100 mm) at these 7 sites. Here, physical fractionation showed that the difference in amount of organic C and N in free particulate OM (fPOM), intra-microaggregate particulate OM (iPOM), and silt and clay associated OM between the RT and CT soils contributed 34, 29, and 37% of the increase in SOC and 35, 32, and 33% of the increase in N. The contribution of OC and N in iPOM and fPOM increased significantly on a relative basis under RT management. Only a modest increase in iPOM and slight enhancement of microaggregation was observed in RT compared with CT soils. We suggest that the repeated disturbance of soil by harvest of root crops and repeated use of cultivators and harrows may limit the accumulation of physically protected POM under RT management of these Western European cereal–root crop rotations. Instead, most of the accumulated OC and N in the surface horizons under RT management is present as free unprotected POM, which could be prone to rapid loss after (temporary) abandonment of RT management.


1995 ◽  
Vol 75 (4) ◽  
pp. 449-458 ◽  
Author(s):  
C. A. Campbell ◽  
B. G. McConkey ◽  
R. P. Zentner ◽  
F. B. Dyck ◽  
F. Selles ◽  
...  

Soil organic matter is important because it influences the productivity and physical well-being of soils. Recently, increased attention has focussed on soil organic matter as a possible sink for C02-C. Despite this interest, there is a lack of data for quantifying the effect of tillage on soil organic matter. Between 1981 and 1994, two tillage experiments were conducted at Swift Current, Saskatchewan, on Swinton loam, an Orthic Brown Chernozemic soil. Organic C and N were monitored periodically to quantify the effects of crop rotation [continuous spring wheat (Cont W) (Triticum aestivum L.) vs. fallow–wheat (F-W)] and tillage management [no-tillage (NT) vs. conventional tillage (CT) involving primarily use of a cultivator and rodweeder]. The effect of snow management on soil organic matter was also evaluated in one experiment, but this factor was not significant. Organic matter changes were mainly observed in the 0- to 7.5-cm soil depth. Carbon and N were greater in both concentrations and amounts in Cont W than in F–W; the latter cropping system was employed on this land during the previous 70–80 yr. In the 0- to 7.5-cm depth, the amount of organic matter was only moderately greater in NT than CT in the Cont W systems while in the F-W systems tillage was not significant (P > 0.10). During the 12-yr period, Cont W (average of NT and CT) gained about 2 t ha−1 more C in the top 15 cm of soil than F-W (average of NT and CT), with most of the increase occurring in the first 5 yr. Further, Cont W (NT) gained about 1.5 t ha−1 more C than Cont W (CT), and F-W (NT) gained about 0.5 t ha−1 more than F-W (CT). When a system that was maintained as Cont W (NT) for 9 yr was changed to Cont W (CT) for 3 yr and then summerfallowed (CT) for 1 yr, soil organic matter declined (P < 0.05). Our observations, supported by calculations based on crop residue production, indicated that an increase in organic C, averaging about 0.4–0.5 t ha−1 yr−1, has occurred in the top 15 cm of soil in Cont W (NT) between 1982 and 1993. However, because of uncertainty in our estimated C levels at the start of the experiment, the nature of the rate of C increase (linear or curvilinear) is not known. Key words: Organic C, organic N, no-till, summerfallow


Soil Systems ◽  
2019 ◽  
Vol 3 (2) ◽  
pp. 42 ◽  
Author(s):  
Gerald Jandl ◽  
Christel Baum ◽  
Goswin Heckrath ◽  
Mogens H. Greve ◽  
Arno Kanal ◽  
...  

Soil organic matter (SOM) is unevenly distributed in arable fields in undulated landscapes, but the chemical composition resulting from their turnover, transport and deposition processes is insufficiently known. Therefore, we aimed at disclosing the molecular-chemical composition of SOM in four different catenae at shoulderslope, backslope and footslope positions in arable fields in the Baltic Sea catchment, Europe. The backslope positions always had the lowest organic C-contents (Corg) (1.6…11.8 g·kg−1) and C-stocks (3.8…8.5 kg·m−2) compared to the shoulderslopes and footslopes (1.7…17.7 g·Corg·kg−1, 5.4…15 kg·Corg·m−2). In the SOM-poor backslope positions, the organic matter was characterized by relatively high proportions of carbohydrates, phenols + lignin monomers, alkylaromatic compounds, N-compounds and amides, indicating intensive microbial decomposition. By contrast, the footslopes had the largest Corg-contents (9.3…16.5 g·kg−1) and C-stocks (8.9…15 kg·m−2) in the catenae and particular enrichments in lipids, lignin dimers, sterols and free fatty acids. These relatively stabile SOM compound classes are interpreted as leftovers from erosive downslope transport and concurrent microbial decomposition, e.g., they are pronounced at backslope positions, followed by restricted microbial decomposition. This heterogeneous SOM distribution calls for an adapted soil management that reduces erosion and places amendments to field areas, such as the shoulderslope and backslope.


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