Systematics and phylogeography of the Australasian mangrove crabs Parasesarma semperi and P. longicristatum (Decapoda : Brachyura : Sesarmidae) based on morphological and molecular data

2018 ◽  
Vol 32 (1) ◽  
pp. 196 ◽  
Author(s):  
Adnan Shahdadi ◽  
Peter J. F. Davie ◽  
Christoph D. Schubart
Keyword(s):  
Genetic Data ◽  
Morphological Characters ◽  
Molecular Data ◽  
Geographic Range ◽  
The Philippines ◽  
Mitochondrial Genes ◽  
Width Ratio ◽  
Sister Relationship ◽  
Mangrove Crabs ◽  
Morphological And Molecular Data

Parasesarma semperi (Bürger, 1893) was first described from Bohol in the Philippines and is considered to be widely distributed in Southeast Asia. Parasesarma longicristatum (Campbell, 1967) was originally described as a subspecies of P. semperi from Queensland, Australia, and later recognised as a full species. In this study, we re-examine specimens of the two species from across their entire geographic range using genetic markers, a morphometric analysis, and traditional morphological characters. Previous taxonomic species diagnoses were found to be unreliable, but morphometric principle component analyses consistently separate the two species, with the length to width ratio of the propodus of the fourth pereiopod being of particular importance. Genetic data corresponding to the mitochondrial genes COI, ND1 and 16S confirmed a close sister relationship between the two species, forming reciprocally monophyletic groups. Both species have high haplotype diversities and high intraspecific gene flow.

Morphology and phylogeny of Reticulitermes sp. (Isoptera, Rhinotermitidae) from Cyprus

2012 ◽  
Vol 102 (6) ◽  
pp. 672-681 ◽  
Author(s):  
S. Ghesini ◽  
M. Marini
Keyword(s):  
Eastern Mediterranean ◽  
Morphological Characters ◽  
Molecular Data ◽  
Mitochondrial Genes ◽  
East Mediterranean ◽  
European Species ◽  
Qualitative And Quantitative ◽  
North Eastern ◽  
Size Groups ◽  
Morphological And Molecular Data

AbstractTaxonomy and phylogeny of termites of the genus Reticulitermes in central and eastern Mediterranean lands are poorly understood, partly due to insufficient sampling. This study aims to contribute to the knowledge of east Mediterranean termites by presenting morphological and molecular data on Reticulitermes from Cyprus. Samples from 15 colonies were collected throughout the island. Qualitative and quantitative morphological characters were analyzed for alate and soldier castes. Partial sequences of the mitochondrial genes COII and 16S were used to evaluate genetic diversity of Cypriot colonies and to determine their phylogenetic relationships with taxa from central and eastern Mediterranean areas.Cypriot alates have some morphological features in common with the Israeli R. clypeatus: an enlarged postclypeus and a wide unpigmented margin of the eye. They are larger than R. clypeatus but smaller than western European species, such as R. banyulensis, R. lucifugus corsicus and R. grassei. For Cypriot soldiers, two size groups were identified, possibly in relation with the age of their mother colonies.Phylogenetic analysis shows that, contrary to what might be expected, the samples with the highest affinity with Cypriot samples are not those from the nearby mainland (south Turkey, Israel), but from north-eastern Greece. Comprehensive sampling in the nearby mainland is lacking, so the possibility that populations exist it that region with an affinity towards Cypriot Reticulitermes sp. cannot be ruled out. Together with samples from the Halkidiki peninsula, north-eastern Greece, northern Turkey and Crete, Cypriot Reticulitermes form a well-supported north-eastern Mediterranean clade.

Phylogenetic placement of Echinotheridion (Araneae:Theridiidae) - do male sexual organ removal, emasculation, and sexual cannibalism in Echinotheridion and Tidarren represent evolutionary replicas?

2006 ◽  
Vol 20 (4) ◽  
pp. 415 ◽  
Author(s):  
Ingi Agnarsson
Keyword(s):  
Morphological Characters ◽  
Molecular Data ◽  
Total Evidence ◽  
Morphological Data ◽  
Phylogenetic Position ◽  
Sexual Cannibalism ◽  
Sister Relationship ◽  
Sexual Organ ◽  
Organ Removal ◽  
Morphological And Molecular Data

Uniquely among spiders, males of two cobweb spider (Theridiidae) genera, Tidarren Chamberlin & Ivie, 1934 and Echinotheridion Levi, 1963, voluntarily amputate one of their secondary sexual organs (the pedipalpi, modified as sperm transfer organs) before their last molt and thus have only one palp as adults. This is the first step in a fascinating sexual biology observed in both genera, which is marked by sexual dimorphism – males are tiny compared with females – and usually involves both emasculation and sexual cannibalism. To study the evolution of these striking traits it is essential to understand the phylogenetic relationship of these genera. Both morphological and molecular data place Tidarren in the subfamily Theridiinae. However, Echinotheridion has not been placed phylogenetically to date owing to rarity of specimens, and difficulty of interpreting the highly autapomorphic palpal organ, the main source of morphological characters. Here, the phylogenetic position of Echinotheridion is inferred using fragments of three nuclear (Histone 3, 18S rDNA, and 28S rDNA) and two mitochondrial (16S rDNA and COI) loci. Each matrix separately, and a combined matrix, were analysed using parsimony with gaps either treated as missing data, or as 5th state, and with Bayesian methods. Although all genes agree that Tidarren and Echinotheridion are closely related, perhaps surprisingly, none of the analyses supported their sister relationship. The sister relationship was ambiguously supported in a preliminary morphological analysis, whereas combined molecular and morphological data refuted it. This implies a more complex evolutionary history of male sexual organ removal and other bizarre sexual biology of Tidarren and Echinotheridion than previously envisioned. Many of the analyses are equally consistent with two hypotheses: a single origin, followed by a secondary loss; or independent evolution of this behaviour in the two genera. However, based on the combined molecular Bayesian phylogeny, and some of the preliminary ‘total evidence’ analyses, the latter hypothesis is better supported.

Redefining Stagonomus Gorski based on morphological and molecular data (Pentatomidae: Eysarcorini)

Zootaxa ◽  
2019 ◽  
Vol 4658 (2) ◽  
pp. 368-374
Author(s):  
MARCOS ROCA-CUSACHS ◽  
SUNGHOON JUNG
Keyword(s):  
16S Rrna ◽  
Cytochrome Oxidase ◽  
Phylogenetic Relationships ◽  
Male Genitalia ◽  
Morphological Characters ◽  
Molecular Data ◽  
Mitochondrial Genes ◽  
Cytochrome Oxidase Subunit ◽  
Cytochrome Oxidase Subunit I ◽  
Morphological And Molecular Data

After reconstructing the phylogenetic relationships among the closely related genera Carbula Stål, Eysarcoris Hahn, and Stagonomus Gorski (tribe Eysarcorini), using the mitochondrial genes: 16S rRNA and cytochrome oxidase subunit I (COI), and incorporating morphological characters to contrast our data, we transfer the species Eysarcoris gibbosus Jakovlev and Eysarcoris venustissimus (Schrank) to the genus Stagonomus, and we propose to place the subgenus Dalleria Mulsant & Rey as a synonym under the nominal subgenus Stagonomus. Additionally, Stagonomus is redefined to include diagnostic characters of the male genitalia.

Sinalliaria, a new genus of Brassicaceae from eastern China, based on morphological and molecular data

Phytotaxa ◽  
2014 ◽  
Vol 186 (4) ◽  
pp. 188 ◽  
Author(s):  
Ying-Ying Zhou ◽  
HONG-WEI ZHANG ◽  
JIANG-QIN HU ◽  
Xiao-Feng Jin
Keyword(s):  
Dna Sequences ◽  
New Genus ◽  
Eastern China ◽  
Distinct Group ◽  
Morphological Characters ◽  
Molecular Data ◽  
New Combinations ◽  
The Family ◽  
Morphological And Molecular Data ◽  
Seed Testa

Sinalliaria is described here as a new genus of the family Brassicaceae from eastern China, based on the morphological characters and molecular sequences. Sinalliaria differs from the related genus Orychophragmus in having basal leaves petiolate, simple or rarely with 1‒3 lateral lobes (not pinnatisect); cauline leaves petiolate, cordate at base (not sessile, auriculate or amplexicaul at base); petals obovate to narrowly obovate, claw inconspicuous (not broadly obovate, with a claw as along as sepal); siliques truncate (not long-beaked) at apex. The microscopic characters of seed testa also show significant differences between Sinalliaria and Orychophragmus. Phylogenetic evidence from DNA sequences of nuclear ribosomal ITS and plastid region trnL-trnF indicates that Sinalliaria is a distinct group related to Orychophragmus and Raphanus, but these three genera do not form a clade. The new genus Sinalliaria is endemic to eastern China and has only one species and one variety. The new combinations, S. limprichtiana (Pax) X. F. Jin, Y. Y. Zhou & H. W. Zhang and S. limprichtiana var. grandifolia (Z. X. An) X. F. Jin, Y. Y. Zhou & H. W. Zhang are proposed here.

scholarly journals Amanita subjunquillea and its ectomycorrhizal association, reported as new for Pakistan

Mycotaxon ◽  
2019 ◽  
Vol 134 (3) ◽  
pp. 413-423
Author(s):  
Muhammad Ishaq ◽  
Arooj Naseer ◽  
Munazza Kiran ◽  
Muhammad Fiaz ◽  
Abdul Nasir Khalid
Keyword(s):  
Its Region ◽  
Morphological Characters ◽  
Molecular Data ◽  
Sequence Analyses ◽  
Dark Orange ◽  
Ectomycorrhizal Roots ◽  
Morphological And Molecular Data ◽  
Quercus Floribunda ◽  
First Time ◽  
Ectomycorrhizal Association

Amanita subjunquillea and its ectomycorrhizal association are reported for the first time from moist temperate Himalayan forests of Pakistan. The sample was studied based on morphological characters and nucleotide sequence analyses of the ITS region generated from basidiomata and ectomycorrhizal roots of Quercus floribunda. Our collection differs from the type in its dark orange pileus disc and pale yellow margins. Remaining morphological and molecular data are consistent with previously reported specimens. This represents the first report of A. subjunquillea from Pakistan.

Revision of Autolytinae (Syllidae: Polychaeta)

Zootaxa ◽  
2004 ◽  
Vol 680 (1) ◽  
pp. 1 ◽  
Author(s):  
ARNE NYGREN
Keyword(s):  
Morphological Characters ◽  
Molecular Data ◽  
Morphological Data ◽  
Data Sets ◽  
Nominal Species ◽  
Strict Consensus Tree ◽  
Incertae Sedis ◽  
Nomina Dubia ◽  
Morphological And Molecular Data ◽  
Combined Data

Autolytinae is revised based on available types, and newly collected specimens. Out of 170 nominal species, 18 are considered as incertae sedis, 43 are regarded as junior synonyms, and 25 are referred to as nomina dubia. The relationships of Autolytinae is assessed from 51 morphological characters and 211 states for 76 ingroup-taxa, and 460 molecular characters from mitochondrial 16S rDNA and nuclear 18S rDNA for 31 ingroup-taxa; outgroups include 12 non-autolytine syllid polychaetes. Two analyses are provided, one including morphological data only, and one with combined morphological and molecular data sets. The resulting strict consensus tree from the combined data is chosen for a reclassification. Three main clades are identified: Procerini trib. n., Autolytini Grube, 1850, and Epigamia gen. n. Proceraea Ehlers, 1864 and Myrianida Milne Edwards, 1845 are referred to as nomen protectum, while Scolopendra Slabber, 1781, Podonereis Blainville, 1818, Amytis Savigny, 1822, Polynice Savigny, 1822, and Nereisyllis Blainville, 1828 are considered

Phylogenetic Relationships of Species of Hypselobarbus (Cypriniformes: Cyprinidae): An Enigmatic Clade Endemic to Aquatic Systems of India

Zootaxa ◽  
2012 ◽  
Vol 3499 (1) ◽  
pp. 63
Author(s):  
M. ARUNACHALAM ◽  
M. RAJA ◽  
M. MURALIDHARAN ◽  
RICHARD L. MAYDEN
Keyword(s):  
Genetic Diversity ◽  
Morphological Study ◽  
Morphological Diversity ◽  
Molecular Data ◽  
Mitochondrial Genes ◽  
Morphological Evidence ◽  
Species Relationships ◽  
Peninsular India ◽  
Morphological And Molecular Data ◽  
Eleven Species

Very little is known about the diversity and systematics of the genus cypriniform genus Hypselobarbus. Currently, the genusincludes at least eleven species, all endemic to freshwater systems of Peninsular India. While these species are commonlyknown in India and are frequently used as a food source, little is known about the morphological diversity within and betweenspecies and nothing is known regarding intraspecific genetic diversity or species relationships. Herein, we examine the geneticdiversity in the genus for 11 mitochondrial genes for eleven populations representing nine of the known 11 species.Hypselobarbus is resolved as monophyletic, with the inclusion of P. carnaticus, and species relatioships are very stronglysupported. Because of the unambiguous relationships strongly supported B. carnaticus is allocated to Hypselobarbus. Thisresearch and ongoing morphological and molecular work with the genus supports the existence of additional new species inpeninsular India in need of further molecular and morphological study. Genetic diversity in the genus is high; for the twospecies wherein more than one sample, and the two of each are suspected to represent undescribed taxa, these populationsexhibited greater genetic divergence than that observed between any two of the other currently recognized species,corroborating our hypothesis based on morphological evidence. Clearly the genus warrants more thorough geographicsampling and examination of morphological and molecular data/analyses to reveal the natural lineages existing in this endemic and enigmatic genus.

scholarly journals Kaindipsocinae is a sister taxon to the rest of Psocidae (Insecta:Psocodea:'Psocoptera'

2011 ◽  
Vol 25 (2) ◽  
pp. 81 ◽  
Author(s):  
Kazunori Yoshizawa ◽  
Emilie Bess ◽  
Kevin P. Johnson
Keyword(s):  
Strong Support ◽  
Molecular Data ◽  
Species Group ◽  
Sister Taxon ◽  
Sister Relationship ◽  
Systematic Status ◽  
Data Support ◽  
Morphological And Molecular Data

The systematic status of Kaindipsocinae (formerly Kaindipsocini) is revised based on morphology of the male terminalia and on molecular data. The genera Clematostigma, Lasiopsocus and Tanystigma are newly assigned to this subfamily. The ‘Blaste’ lunulata species-group is also placed within Kaindipsocinae and is probably closest to Kaindipsocus. Both morphological and molecular data provide strong support for monophyly of Kaindipsocinae and molecular data support a sister relationship between this subfamily and the rest of Psocidae.

scholarly journals Cretaceous origin and repeated tertiary diversification of the redefined butterflies

2011 ◽  
Vol 279 (1731) ◽  
pp. 1093-1099 ◽  
Author(s):  
Maria Heikkilä ◽  
Lauri Kaila ◽  
Marko Mutanen ◽  
Carlos Peña ◽  
Niklas Wahlberg
Keyword(s):  
Phylogenetic Analysis ◽  
Phylogenetic Relationships ◽  
Evolutionary History ◽  
Sister Group ◽  
Morphological Characters ◽  
Molecular Data ◽  
Bayesian Approaches ◽  
The Family ◽  
Family Level ◽  
Morphological And Molecular Data

Although the taxonomy of the ca 18 000 species of butterflies and skippers is well known, the family-level relationships are still debated. Here, we present, to our knowledge, the most comprehensive phylogenetic analysis of the superfamilies Papilionoidea, Hesperioidea and Hedyloidea to date based on morphological and molecular data. We reconstructed their phylogenetic relationships using parsimony and Bayesian approaches. We estimated times and rates of diversification along lineages in order to reconstruct their evolutionary history. Our results suggest that the butterflies, as traditionally understood, are paraphyletic, with Papilionidae being the sister-group to Hesperioidea, Hedyloidea and all other butterflies. Hence, the families in the current three superfamilies should be placed in a single superfamily Papilionoidea. In addition, we find that Hedylidae is sister to Hesperiidae, and this novel relationship is supported by two morphological characters. The families diverged in the Early Cretaceous but diversified after the Cretaceous–Palaeogene event. The diversification of butterflies is characterized by a slow speciation rate in the lineage leading to Baronia brevicornis , a period of stasis by the skippers after divergence and a burst of diversification in the lineages leading to Nymphalidae, Riodinidae and Lycaenidae.

Variability, host range, delimitation and neotypification of Amanita simulans (Amanita section Vaginatae): collections associated with Helianthemum grasslands, and epitypification of A. lividopallescens

Phytotaxa ◽  
2016 ◽  
Vol 280 (1) ◽  
pp. 1 ◽  
Author(s):  
ALFREDO VIZZINI ◽  
MIRCA ZOTTI ◽  
MIDO TRAVERSO ◽  
ENRICO ERCOLE ◽  
PIERRE-ARTHUR MOREAU ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Morphological Variability ◽  
Taxonomic Status ◽  
Morphological Characters ◽  
Molecular Data ◽  
Phylogenetic Position ◽  
Extensive Discussion ◽  
Closely Related Species ◽  
Colour Form ◽  
Morphological And Molecular Data

Several collections of Amanita species from section Vaginatae have been reported to be strictly associated with Helianthemum plants growing in grasslands, a still largely under-explored ectomycorrhizal habitat. The main aim of this study was to investigate the taxonomic status and phylogenetic position of strictly Helianthemum-associated Amanita sect. Vaginatae taxa, informally named Amanita “helianthemicola”. Collections from Italy, England and France were included in this study. The morphologically closely related species complex A. lividopallescens was also examined. Analyses were carried out based on both morphological and molecular data (phylogenetic analysis of the nrITS sequences). All investigated Amanita collections, which are strictly associated with Helianthemum nummularium, turned out to be conspecific with A. simulans. Amanita simulans was recently described from Sardinia (Italy) from Populus nigra habitats based on morphological characters only. As the holotype of A. simulans was lost, a neotype is designated here based on a voucher from the original collecting area. Amanita simulans is re-described, and an extensive discussion on the morphological variability, host species range, distribution and related taxa is provided. Amanita lividopallescens was confirmed as a good species, and re-delimited based on our phylogenetic analysis; moreover, it was epitypified with a recent and well-documented collection from Corse (France). Amanita stenospora is a synonym of A. lividopallescens, being a colour form of the latter without taxonomic value.

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