Whale falls, multiple colonisations of the deep, and the phylogeny of Hesionidae (Annelida)

2015 ◽  
Vol 29 (2) ◽  
pp. 105 ◽  
Author(s):  
Mindi Summers ◽  
Fredrik Pleijel ◽  
Greg W. Rouse
Keyword(s):  
New Species ◽  
Maximum Likelihood ◽  
16S Rrna ◽  
Deep Sea ◽  
Phylogenetic Relationships ◽  
18S Rrna ◽  
Shallow Waters ◽  
28S Rrna ◽  
Mitochondrial Cytochrome ◽  
New Members

Phylogenetic relationships within Hesionidae Grube, 1850 are assessed via maximum parsimony and maximum likelihood analyses of mitochondrial (cytochrome c oxidase subunit I and 16S rRNA) and nuclear (18S rRNA, and 28S rRNA) data. The analyses are based on 42 hesionid species; six of these being new species that are described here. The new species, all from deep (>200 m depth) benthic environments (including whale falls) in the eastern Pacific, are Gyptis shannonae, sp. nov., Neogyptis julii, sp. nov., Sirsoe sirikos, sp. nov., Vrijenhoekia ketea, sp. nov., Vrijenhoekia falenothiras, sp. nov., and Vrijenhoekia ahabi, sp. nov. The molecular divergence among the new members of Vrijenhoekia is pronounced enough to consider them cryptic species, even though we cannot distinguish among them morphologically. Our results also showed that the subfamily Hesioninae Grube, 1850, as traditionally delineated, was paraphyletic. We thus restrict Hesioninae to include only Hesionini Grube, 1850 and refer the remaining members to Psamathinae Pleijel, 1998. The present study increases the number of hesionid species associated with whale falls from one to six and markedly increases the number of described deep-sea hesionid taxa. There appear to have been multiple colonisations of the deep sea from shallow waters by hesionids, though further sampling is warranted.

Systematic relationships of the Taeniapterini (Diptera: Micropezidae, Taeniapterinae)

Zootaxa ◽  
2021 ◽  
Vol 5004 (2) ◽  
pp. 370-384
Author(s):  
GUSTAVO BORGES FERRO ◽  
JEFFREY H. SKEVINGTON ◽  
STEPHEN A. MARSHALL ◽  
SCOTT KELSO
Keyword(s):  
Bayesian Inference ◽  
Maximum Likelihood ◽  
Cytochrome C ◽  
16S Rrna ◽  
Molecular Phylogeny ◽  
Cytochrome C Oxidase ◽  
28S Rrna ◽  
Mitochondrial Cytochrome ◽  
Oxidase Subunit ◽  
Systematic Relationships

A molecular phylogeny for the Taeniapterinae is presented based on mitochondrial (cytochrome c oxidase subunit I, COI), ribosomal (16S rRNA and 28S rRNA) and nuclear (EF-1α and CAD) genes of 48 specimens including 40 species. Maximum likelihood and Bayesian inference were used to analyze the total concatenated dataset of 8769 bp. The results confirm that tribal classifications in Taeniapterinae are artificial and support the separation of Paragrallomyia Hendel and Taeniaptera sensu Ferro & Marshall (2020).

Determining the position of Diomocoris, Micromimetus and Taylorilygus in the Lygus-complex based on molecular data and first records of Diomocoris and Micromimetus from Australia, including four new species (Insecta : Hemiptera : Miridae : Mirinae)

2021 ◽  
Author(s):  
Anna A. Namyatova ◽  
Michael D. Schwartz ◽  
Gerasimos Cassis
Keyword(s):  
New Species ◽  
16S Rrna ◽  
Morphological Study ◽  
18S Rrna ◽  
Initial Step ◽  
Sister Group ◽  
Molecular Data ◽  
28S Rrna ◽  
Group Relationships ◽  
First Time

The Lygus-complex is one of the most taxonomically challenging groups of Miridae (Heteroptera), and its Australian fauna is poorly studied. Here we examine the Australian taxa of the Lygus-complex using morphological and molecular methods. After a detailed morphological study of the material collected throughout Australia, Taylorilygus nebulosus is transferred to Diomocoris, with the genus recorded for the first time in this country. Taylorilygus apicalis, also widely distributed in Australia, is redescribed on the basis of Australian material. The genus Micromimetus is recorded for the first time in Australia, with M. celiae, sp. nov., M. hannahae, sp. nov., M. nikolai, sp. nov. and M. shofneri, sp. nov. described as new to science. Micromimetus pictipes is redescribed and its distributional range is increased. The monophyly of the Lygus-complex and relationships within this group were tested using cytochrome c oxidase subunit I (COI), 16S rRNA, 18S rRNA and 28S rRNA markers. The Lygus-complex has been found to be non-monophyletic. Phylogeny confirmed the monophyly of Micromimetus, and it has shown that Taylorilygus apicalis is closer to Micromimetus species than to Diomocoris nebulosus. This study is the initial step in understanding the Lygus-complex phylogeny; analyses with more taxa, more genes and morphology are needed to reveal the interrelationships within this group, and sister-group relationships of Australian taxa. http://zoobank.org/urn:lsid:zoobank.org:pub:7393D96B-2BBA-438D-A134-D372EFE7FB9E

scholarly journals A troglobitic species of the centipede Cryptops (Chilopoda, Scolopendromorpha) from northwestern Botswana

ZooKeys ◽  
2020 ◽  
Vol 977 ◽  
pp. 25-40 ◽  
Author(s):  
Gregory D. Edgecombe ◽  
Nesrine Akkari ◽  
Edward C. Netherlands ◽  
Gerhard Du Preez
Keyword(s):  
South Africa ◽  
New Species ◽  
New Zealand ◽  
16S Rrna ◽  
Molecular Phylogenetics ◽  
18S Rrna ◽  
Temperate Species ◽  
28S Rrna ◽  
Oxidase Subunit ◽  
A New Species

A new species of Cryptops, C. (Cryptops) legagussp. nov., occurs in caves in the Koanaka and Gcwihaba Hills in northwestern Botswana. Bayesian molecular phylogenetics using 18S rRNA, 28S rRNA, 16S rRNA and cytochrome c oxidase subunit I corroborates a morphological assignment to the subgenus Cryptops and closest affinities to southern temperate species in South Africa, Australia and New Zealand. The new species is not conspicuously modified as a troglomorph.

On the hydroid genus Sibogella Billard, 1911 (Cnidaria: Hydrozoa: Plumulariidae), with descriptions of two new species

Zootaxa ◽  
2020 ◽  
Vol 4860 (4) ◽  
pp. 521-540
Author(s):  
HORIA R. GALEA ◽  
DAVIDE MAGGIONI ◽  
CRISTINA G. DI CAMILLO
Keyword(s):  
New Species ◽  
16S Rrna ◽  
Type Species ◽  
New Caledonia ◽  
Shallow Waters ◽  
28S Rrna ◽  
Monotypic Genus ◽  
Deep Waters ◽  
Two New Species ◽  
Taxonomical Study

The so far monotypic genus Sibogella Billard, 1911 is revised based on literature data. Its type species, S. erecta Billard, 1911, is thoroughly redescribed and illustrated, and accounts on two new congeners, S. flabellata sp. nov. from shallow waters of Indonesia and S. spissa sp. nov. from deep waters of New Caledonia, are provided. Single- (16S rRNA) and multi-locus (concatenated 16S, 18S, and 28S rRNA) phylogenetic assessments of the Plumulariidae, including newly-sequenced Sibogella material, supplement the alpha-taxonomical study. 

A new nemertean with a branched proboscis, Gorgonorhynchus citrinus sp. nov. (Nemertea: Pilidiophora), with molecular systematics of the genus

2021 ◽  
Author(s):  
Natsumi Hookabe ◽  
Cong-Mei Xu ◽  
Aoi Tsuyuki ◽  
Naoto Jimi ◽  
Shi-Chun Sun ◽  
...  
Keyword(s):  
Cytochrome C ◽  
16S Rrna ◽  
Cytochrome C Oxidase ◽  
Molecular Systematics ◽  
Phylogenetic Relationships ◽  
18S Rrna ◽  
Histone H3 ◽  
Sister Group ◽  
28S Rrna ◽  
Cerebratulus Lacteus

Among ~1300 species of world nemerteans, seven species in five genera of lineid heteronemerteans have been known to possess a branched proboscis. In this paper, we describe the eighth branched-proboscis species: Gorgonorhynchus citrinus sp. nov. from Okinawa, Japan. We also report Gorgonorhynchus cf. repens Dakin & Fordham, 1931 with uniformly orange body, as a new member for the Japanese nemertean fauna. We infer the phylogenetic relationships between these forms and other members of Lineidae McIntosh, 1874 for which partial sequences of the mitochondrial 16S rRNA and cytochrome c oxidase subunit I, and the nuclear 18S rRNA, 28S rRNA, and histone H3 genes are available in public databases, along with newly sequenced data of another branched-proboscis heteronemertean, Polydendrorhynchus zhanjiangensis (Yin & Zheng, 1984) from China. In the resulting tree, Gorgonorhychus Dakin & Fordham, 1931 was sister group to non-branched-proboscis Dushia Corrêa, 1963, whereas P. zhanjiangensis was sister group to likewise non-branched-proboscis Cerebratulus lacteus (Leidy, 1851). http://zoobank.org/urn:lsid:zoobank.org:pub:685992C5-F595-4C28-9178-256D945E595A

Phylogeny of hymenolepidids (Cestoda: Cyclophyllidea) from mammals: sequences of 18S rRNA and COI genes confirm major clades revealed by the 28S rRNA analyses

2021 ◽  
Vol 95 ◽  
Author(s):  
B. Neov ◽  
G.P. Vasileva ◽  
G. Radoslavov ◽  
P. Hristov ◽  
D.T.J. Littlewood ◽  
...  
Keyword(s):  
Ribosomal Rna ◽  
18S Rrna ◽  
Phylogenetic Analyses ◽  
The Other ◽  
Rrna Genes ◽  
Host Switching ◽  
28S Rrna ◽  
Mitochondrial Cytochrome ◽  
Rapid Radiation ◽  
18S Rrna Genes

Abstract The aim of the study is to test a hypothesis for the phylogenetic relationships among mammalian hymenolepidid tapeworms, based on partial (D1–D3) nuclear 28S ribosomal RNA (rRNA) genes, by estimating new molecular phylogenies for the group based on partial mitochondrial cytochrome c oxidase I (COI) and nuclear 18S rRNA genes, as well as a combined analysis using all three genes. New sequences of COI and 18S rRNA genes were obtained for Coronacanthus integrus, C. magnihamatus, C. omissus, C. vassilevi, Ditestolepis diaphana, Lineolepis scutigera, Spasskylepis ovaluteri, Staphylocystis tiara, S. furcata, S. uncinata, Vaucherilepis trichophorus and Neoskrjabinolepis sp. The phylogenetic analyses confirmed the major clades identified by Haukisalmi et al. (Zoologica Scripta 39: 631–641, 2010): Ditestolepis clade, Hymenolepis clade, Rodentolepis clade and Arostrilepis clade. While the Ditestolepis clade is associated with soricids, the structure of the other three clades suggests multiple evolutionary events of host switching between shrews and rodents. Two of the present analyses (18S rRNA and COI genes) show that the basal relationships of the four mammalian clades are branching at the same polytomy with several hymenolepidids from birds (both terrestrial and aquatic). This may indicate a rapid radiation of the group, with multiple events of colonizations of mammalian hosts by avian parasites.

An integrative description of Pilatobius nuominensis sp. nov. (Tardigrada: Hypsibiidae) from China

Zootaxa ◽  
2021 ◽  
Vol 5026 (1) ◽  
pp. 65-76
Author(s):  
XUE-LING SUN ◽  
JING-YU ZHANG ◽  
NING WANG ◽  
MIN ZHAO ◽  
XUE-GANG LUO
Keyword(s):  
New Species ◽  
18S Rrna ◽  
Taxonomic Status ◽  
First Record ◽  
Nucleotide Sequences ◽  
28S Rrna ◽  
Dna Fragments ◽  
Caudal Region ◽  
Mitochondrial Coi ◽  
Independent Verification

A newly identified tardigrade species from China, Pilatobius nuominensis sp. nov., belongs to the group of species with cuticle of the dorsal and lateral caudal region with evident irregular polygonal sculpture. Nucleotide sequences of two nuclear (18S rRNA, 28S rRNA) and one mitochondrial (COI) DNA fragments of the new species are provided, which allows an independent verification of the taxonomic status of the new species. This is the first record of the genus Pilatobius in the Great Hinggan Mountains.  

Morphological and molecular characterisation of Helicotylenchus ciceri n. sp. and H. scoticus Boag & Jairajpuri, 1985 (Nematoda: Hoplolaimidae) from Iran

Nematology ◽  
2020 ◽  
Vol 22 (6) ◽  
pp. 611-626
Author(s):  
Fariba Mohammadi Zameleh ◽  
Akbar Karegar ◽  
Reza Ghaderi ◽  
Abbas Mokaram Hesar
Keyword(s):  
New Species ◽  
Excretory Pore ◽  
18S Rrna ◽  
Phylogenetic Analyses ◽  
Rrna Genes ◽  
28S Rrna ◽  
Molecular Characterisation ◽  
Closely Related Species ◽  
Partial 18S ◽  
Molecular Characters

Summary Helicotylenchus ciceri n. sp. and H. scoticus are described and illustrated based on morphological, morphometric and molecular characters. The new species is characterised by a conical and truncated lip region with five or six distinct annuli, stylet 32-37 μm long with anteriorly concave knobs, secretory-excretory pore posterior to the pharyngo-intestinal valve, dorsally convex-conoid tail with a terminal projection, phasmids 14 (7-20) annuli anterior to the level of anus, empty spermatheca and absence of males. Intraspecific variation of 16 populations of H. scoticus, collected from chickpea and lentil fields in Kermanshah province, western Iran, is discussed. The results of the phylogenetic analyses based on the sequences of the partial 18S rRNA, D2-D3 expansion segments of 28S rRNA and ITS rRNA genes are provided for the studied species, confirming their differences from each other and determining the position of them and their relationships with closely related species.

scholarly journals A new species of the Dendropsophus parviceps group from the western Amazon Basin (Amphibia: Anura: Hylidae)

Zootaxa ◽  
2012 ◽  
Vol 3249 (1) ◽  
pp. 18 ◽  
Author(s):  
ANA P. MOTTA ◽  
SANTIAGO CASTROVIEJO-FISHER ◽  
PABLO J. VENEGAS ◽  
VICTOR G.D. ORRICO ◽  
JOSÉ M. PADIAL
Keyword(s):  
New Species ◽  
Maximum Likelihood ◽  
16S Rrna ◽  
Amazon Basin ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Terra Firme ◽  
Base Pairs ◽  
White Spots ◽  
A New Species

We describe Dendropsophus frosti sp. nov. from lowland terra firme rainforests of the headwaters of the Amazon RiverBasin in Colombia and Peru. The new species is known from only two localities, the type locality near Leticia (Departa-mento Amazonas, Colombia, 04° 06' 24.2" S, 69° 56' 57.4" W; 103 m.a.s.l.), and the paratopotypic locality, Piedras in thePutumayo basin (Departamento Loreto, Peru, 02.79278° S, 72.91750° W; 90–170 m.a.s.l.). Maximum likelihood and par-simony analyses of 2436 aligned base pairs of the 12S and 16S rRNA genes recovered the new species as a member of D.parviceps group and sister to D. brevifrons. The new species is most closely related to D. parviceps, D. brevifrons, and D.koechlini, and it can be readily distinguished from these and all other members of the D. parviceps group by, among othercharacters, its plain dorsal light brown coloration, copper iris, plain immaculate pale yellow to white venter coloration, lack of flash marks on groin and axillae, and absence of white spots on lips.

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