Corrigendum to: Genetic mapping of basal root gravitropism and phosphorus acquisition efficiency in common bean

2006 ◽  
Vol 33 (2) ◽  
pp. 207 ◽  
Author(s):  
Hong Liao ◽  
Xiaolong Yan ◽  
Gerardo Rubio ◽  
Steve E. Beebe ◽  
Matthew W. Blair ◽  
...  
Keyword(s):  
Common Bean ◽  
Root Length ◽  
Recombinant Inbred Lines ◽  
Single Point ◽  
Interval Mapping ◽  
P Uptake ◽  
Relative Distribution ◽  
P Efficiency ◽  
P Deficiency ◽  
Root Gravitropism

Root gravitropism determines the relative distribution of plant roots in different soil layers, and therefore, may influence the acquisition of shallow soil resources such as phosphorus (P). Growth pouch and field studies were conducted to evaluate root gravitropism of common bean (Phaseolus vulgaris L.) in response to P deficiency and to detect quantitative trait loci (QTL) associated with this trait. A deep-rooted genotype, DOR364, was crossed with a shallow-rooted genotype, G19833, to obtain 86 F5.7 recombinant inbred lines (RILs). Root gravitropic traits were measured as basal root growth angle (BRGA), shallow basal root length (SBRL, basal root length in the top 0-3 cm of soil) and relative shallow basal root length (RSBRL, percentage of basal root length in the top 0-3 cm of soil relative to total basal root length). Large genetic variability for these traits was found in the parents and RILs, with BRGA ranging from -18.73 to 56.69� and SBRL ranging from 0.42 to 2.63 m per plant. The parents and six RILs with contrasting root gravitropism were further evaluated in the field, where root shallowness was significantly correlated with plant growth and P uptake. QTL were detected by single point analysis (SPA), interval mapping (IM) and composite interval mapping (CIM) techniques with a genetic map for the DOR364 � G19833 population consisting of 236 molecular markers. The IM�/�CIM QTL were detected among the 11 linkage groups of common bean, with 16 QTL controlling the above root traits and six QTL controlling P acquisition efficiency (PAE) in the field study. At least three of the root trait QTL were associated with QTL for PAE, suggesting that root gravitropic traits are associated with PAE and that QTL for these traits can be used to facilitate selection and breeding for higher P efficiency in common bean and other crops.

Genetic mapping of basal root gravitropism and phosphorus acquisition efficiency in common bean

2004 ◽  
Vol 31 (10) ◽  
pp. 959 ◽  
Author(s):  
Hong Liao ◽  
Xiaolong Yan ◽  
Gerardo Rubio ◽  
Steve E. Beebe ◽  
Matthew W. Blair ◽  
...  
Keyword(s):  
Common Bean ◽  
Root Length ◽  
Recombinant Inbred Lines ◽  
Single Point ◽  
Interval Mapping ◽  
P Uptake ◽  
Relative Distribution ◽  
P Efficiency ◽  
P Deficiency ◽  
Root Gravitropism

Root gravitropism determines the relative distribution of plant roots in different soil layers, and therefore, may influence the acquisition of shallow soil resources such as phosphorus (P). Growth pouch and field studies were conducted to evaluate root gravitropism of common bean (Phaseolus vulgaris L.) in response to P deficiency and to detect quantitative trait loci (QTL) associated with this trait. A deep-rooted genotype, DOR364, was crossed with a shallow-rooted genotype, G19833, to obtain 86 F5.7 recombinant inbred lines (RILs). Root gravitropic traits were measured as basal root growth angle (BRGA), shallow basal root length (SBRL, basal root length in the top 0–3 cm of soil) and relative shallow basal root length (RSBRL, percentage of basal root length in the top 0–3 cm of soil relative to total basal root length). Large genetic variability for these traits was found in the parents and RILs, with BRGA ranging from –18.73 to 56.69º and SBRL ranging from 0.42 to 2.63 m per plant. The parents and six RILs with contrasting root gravitropism were further evaluated in the field, where root shallowness was significantly correlated with plant growth and P uptake. QTL were detected by single point analysis (SPA), interval mapping (IM) and composite interval mapping (CIM) techniques with a genetic map for the DOR364 × G19833 population consisting of 236 molecular markers. The IM / CIM QTL were detected among the 11 linkage groups of common bean, with 16 QTL controlling the above root traits and six QTL controlling P acquisition efficiency (PAE) in the field study. At least three of the root trait QTL were associated with QTL for PAE, suggesting that root gravitropic traits are associated with PAE and that QTL for these traits can be used to facilitate selection and breeding for higher P efficiency in common bean and other crops.

Sex-specifically responsive strategies to phosphorus availability combined with different soil nitrogen forms in dioecious Populus cathayana

2021 ◽  
Author(s):  
Xiucheng Liu ◽  
Yuting Wang ◽  
Shuangri Liu ◽  
Miao Liu
Keyword(s):  
Root Length ◽  
Root Length Density ◽  
Specific Root Length ◽  
P Uptake ◽  
Root Tip ◽  
P Availability ◽  
P Deficiency ◽  
Populus Cathayana ◽  
Leaf P ◽  
P Supply

Abstract Aims Phosphorus (P) availability and efficiency are especially important for plant growth and productivity. However, the sex-specific P acquisition and utilization strategies of dioecious plant species under different N forms are not clear. Methods This study investigated the responsive mechanisms of dioecious Populus cathayana females and males based on P uptake and allocation to soil P supply under N deficiency, nitrate (NO3 −) and ammonium (NH4 +) supply. Important Findings Females had a greater biomass, root length density (RLD), specific root length (SRL) and shoot P concentration than males under normal P availability with two N supplies. NH4 + supply led to higher total root length, RLD and SRL but lower root tip number than NO3 − supply under normal P supply. Under P deficiency, males showed a smaller root system but greater photosynthetic P availability and higher leaf P remobilization, exhibiting a better capacity to adaptation to P-deficiency than females. Under P deficiency, NO3 − supply increased leaf photosynthesis and PUE but reduced RLD and SRL in females while males had higher leaf P redistribution and photosynthetic PUE than NH4 + supply. Females had a better potentiality to cope with P deficiency under NO3 − supply than NH4 + supply; the contrary was true for males. These results suggest that females may devote to increase in P uptake and shoot P allocation under normal P availability, especially under NO3 − supply, while males adopt more efficient resource use and P remobilization to maximum their tolerance to P-deficiency.

scholarly journals Phosphorus Uptake and Utilization Efficiency in Peanut1

1997 ◽  
Vol 24 (1) ◽  
pp. 1-6 ◽  
Author(s):  
K. R. Krishna
Keyword(s):  
Root Length ◽  
Phosphorus Uptake ◽  
P Uptake ◽  
Utilization Efficiency ◽  
P Efficiency ◽  
Efficiency Ratio ◽  
Soil P ◽  
Arachis Hypogaea L ◽  
P Accumulation ◽  
Total P

Abstract Cultivars of a crop can differ genetically with respect to their uptake, translocation, accumulation, and use of phosphorus. The objective of this paper was to evaluate genetic variation for P uptake and utilization among peanut (Arachis hypogaea L.) genotypes. Several traits contribute to the total P efficiency of the genotype, including root length, rate of P uptake per unit root length, leaf and pod characters such as P accumulation, and dry matter/yield produced per unit P absorbed [i.e., P efficiency ratio (PER)]. Peanut genotypes with increased P uptake and higher PER were identified. Some genotypes sustained higher PER at both low and high soil P availabilities.

Phosphorus efficiency of three cereals as related to indigenous mycorrhizal infection

1992 ◽  
Vol 43 (3) ◽  
pp. 479 ◽  
Author(s):  
JB Baon ◽  
SE Smith ◽  
AM Alston ◽  
RD Wheeler
Keyword(s):  
Root Length ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Triticum Aestivum L ◽  
P Uptake ◽  
Phosphorus Efficiency ◽  
Mycorrhizal Infection ◽  
P Efficiency ◽  
Hordeum Vulgare L ◽  
Set Up

The influence of indigenous vesicular-arbuscular mycorrhizal infection on the assessment of phosphorus (P) efficiency in wheat ( Triticum aestivum L. cv. Spear), barley (Hordeum vulgare L. cv. Galleon) and rye (Secale cereale L. cv. S.A. Commercial) was studied. P efficiency was defined in terms of uptake (mg P pot-1) or utilization (g dw mg-1 P). Experiments were set up with two soils which had low concentrations of plant available P and had been used in a previous study of P efficiency in cereals. Numbers of spores and infective propagules were significantly different in the two soils. In the soil with low propagule density, the extent of mycorrhizal infection of barley, wheat and rye increased with time. Twenty days after transplanting 3-day old seedlings, there was no difference in the percentage of root length infected (2.0%), but at 40 days, wheat (22.4%) and barley (19.3%) had significantly greater percentage of infected root than had rye (10.7%). At 30 days, wheat had a significantly higher percentage of root length infected than barley. In the soil with high propagule density, infection occurred more rapidly, so that the percentage of root length of wheat and barley infected was not significantly different at the three times of harvest. However, infection of rye significantly increased with time and was higher (31.8%) than that of barley (19.8%) at the final harvest. Mycorrhizal infection was positively correlated with efficiency of P uptake in barley, but not in wheat or rye. However, efficiency in utilization of P by barley and wheat was negatively correlated with infection. The colonization of cereals by the indigenous mycorrhizal fungi decreased with the addition of P to the soils. The results of these studies indicate the potential importance of mycorrhizal infection in assessment of P efficiency in cereals.

scholarly journals Kinetics of phosphorus uptake and root morphology of local and improved varieties of maize

2004 ◽  
Vol 61 (1) ◽  
pp. 69-76 ◽  
Author(s):  
Cynthia Torres de Toledo Machado ◽  
Ângela Maria Cangiani Furlani
Keyword(s):  
Kinetic Parameters ◽  
Root Length ◽  
Dry Matter ◽  
Soil Phosphorus ◽  
Phosphorus Uptake ◽  
Efficiency Index ◽  
Morphological Characters ◽  
P Uptake ◽  
P Efficiency ◽  
Maize Varieties

Interspecific and intraspecific differences in the efficiency of utilization of soil phosphorus (P) are explained, in part, by plant morphological and physiological variations, which characterize the plant for nutrient acquisition. As part of a study on maize genotypes characterization for P-uptake and use efficiency, kinetic parameters of P uptake and root morphological characters were evaluated for six local and improved maize varieties, grown in nutrient solution. The kinetic parameters related to P influx were: maximal transport rate (Vmax), the Michaelis-Menten constant (Km), and the external concentration when net uptake is zero (Cmin). Measured root morphological characters were: root length, radius, and surface area. Shoot and root dry matter yield and the P content in these parts were also determined. Diferences among varieties were observed in the kinetic parameters Vmax and Km, root length and in root/shoot dry matter ratio. Lower Km values were better indicatives of P uptake ability of the varietes and were significantly correlated to higher dry matter production and P-efficiency index.

scholarly journals Root traits of common bean genotypes used in breeding programs for disease resistance

2008 ◽  
Vol 43 (6) ◽  
pp. 707-712 ◽  
Author(s):  
Rogério Faria Vieira ◽  
José Eustáquio Souza Carneiro ◽  
Jonathan Paul Lynch
Keyword(s):  
Disease Resistance ◽  
Common Bean ◽  
Root Length ◽  
Lateral Roots ◽  
Primary Root ◽  
Root Traits ◽  
Breeding Programs ◽  
Primary Roots ◽  
Root Gravitropism ◽  
Basal Roots

The objective of this work was to assess root traits of 19 common bean genotypes, used in breeding programs for disease resistance. Genotypes DOR 364 and G 19833 were used as deep and shallow basal root checks, respectively. The number of whorls and basal roots were assessed on five-day old seedlings grown in germination paper. Growth pouch studies were conducted to evaluate basal root gravitropism and lateral root length from primary roots, in seven-day old seedlings. The following root gravitropic traits were estimated: basal growth angle, shallow basal root length (localized in the top 2 cm), and relative shallow basal root growth. Number of whorls varied from 1.47 to 3.07, and number of basal roots ranged from 5.67 (genotype TO) to 12.07 (cultivar Jalo MG-65). Cultivars BRS MG Talismã, Carioca, BRS Pioneiro, and Diamante Negro exhibited shallow basal roots, while genotypes Vi-10-2-1, TU, AB 136, and México 54 showed deep basal roots. Cultivar Jalo MG-65 showed more lateral roots from the primary root than the other genotypes. Genotypes used on common bean breeding programs for disease resistance have great variability on basal and primary root traits.

scholarly journals Genetic Dissection of Phosphorous Uptake and Utilization Efficiency Traits Using GWAS in Mungbean

Agronomy ◽  
2021 ◽  
Vol 11 (7) ◽  
pp. 1401
Author(s):  
Venkata Ravi Prakash Reddy ◽  
Shouvik Das ◽  
Harsh Kumar Dikshit ◽  
Gyan Prakash Mishra ◽  
Muraleedhar S. Aski ◽  
...  
Keyword(s):  
Genome Wide Association Study ◽  
Genotyping By Sequencing ◽  
Dry Weight ◽  
P Uptake ◽  
Utilization Efficiency ◽  
Genetic Dissection ◽  
P Deficiency ◽  
P Utilization ◽  
P Utilization Efficiency ◽  
Phosphorous Uptake

Mungbean (Vignaradiata L. Wilczek) is an early maturing legume grown predominantly in Asia for its protein-rich seeds. P deficiency can lead to several physiological disorders which ultimately result in a low grain yield in mungbean. The genetic dissection of PUpE (Puptake efficiency) and PUtE (P utilization efficiency) traits are essential for breeding mungbean varieties with a high P uptake and utilization efficiency. The study involves an association mapping panel consisting of 120 mungbean genotypes which were phenotyped for total dry weight, P concentration, total P uptake, and P utilization efficiency under low P (LP) and normal P (NP) conditions in a hydroponic system. A genotyping-by-sequencing (GBS) based genome-wide association study (GWAS) approach was employed to dissect the complexity of PUpE and PUtE traits at the genetic level in mungbean. This has identified 116 SNPs in 61 protein-coding genes and of these, 16 have been found to enhance phosphorous uptake and utilization efficiency in mungbeans. We identified six genes with a high expression (VRADI01G04370, VRADI05G20860, VRADI06G12490, VRADI08G20910, VRADI08G00070 and VRADI09G09030) in root, shoot apical meristem and leaf, indicating their role in the regulation of P uptake and utilization efficiency in mungbean. The SNPs present in three genes have also been validated using a Sanger sequencing approach.

Quantitative Trait Loci for the Monoamine-Related Traits Heart Rate and Headless Behavior inDrosophila melanogaster

Genetics ◽  
2001 ◽  
Vol 157 (1) ◽  
pp. 283-294 ◽  
Author(s):  
Kristie Ashton ◽  
Ana Patricia Wagoner ◽  
Roland Carrillo ◽  
Greg Gibson
Keyword(s):  
Heart Rate ◽  
Genetic Variation ◽  
Recombinant Inbred Lines ◽  
Model Organism ◽  
Interval Mapping ◽  
Activity Levels ◽  
Environmental Variance ◽  
Genome Wide ◽  
A Genome ◽  
Monoamine Receptors

AbstractDrosophila melanogaster appears to be well suited as a model organism for quantitative pharmacogenetic analysis. A genome-wide deficiency screen for haploinsufficient effects on prepupal heart rate identified nine regions of the genome that significantly reduce (five deficiencies) or increase (four deficiencies) heart rate across a range of genetic backgrounds. Candidate genes include several neurotransmitter receptor loci, particularly monoamine receptors, consistent with results of prior pharmacological manipulations of heart rate, as well as genes associated with paralytic phenotypes. Significant genetic variation is also shown to exist for a suite of four autonomic behaviors that are exhibited spontaneously upon decapitation, namely, grooming, grasping, righting, and quivering. Overall activity levels are increased by application of particular concentrations of the drugs octopamine and nicotine, but due to high environmental variance both within and among replicate vials, the significance of genetic variation among wild-type lines for response to the drugs is difficult to establish. An interval mapping design was also used to map two or three QTL for each behavioral trait in a set of recombinant inbred lines derived from the laboratory stocks Oregon-R and 2b.

scholarly journals Variability of root traits in common bean genotypes at different levels of phosphorus supply and ontogenetic stages

2014 ◽  
Vol 38 (4) ◽  
pp. 1170-1180 ◽  
Author(s):  
Roberto dos Santos Trindade ◽  
Adelson Paulo Araújo
Keyword(s):  
Common Bean ◽  
Root Length ◽  
Root Traits ◽  
Growth Stages ◽  
Phenotypic Variance ◽  
Root Mass ◽  
Root Area ◽  
Ontogenetic Stages ◽  
Growth Habits ◽  
Selection Of

Selection of common bean (Phaseolus vulgaris L.) cultivars with enhanced root growth would be a strategy for increasing P uptake and grain yield in tropical soils, but the strong plasticity of root traits may compromise their inclusion in breeding programs. The aim of this study was to evaluate the magnitude of the genotypic variability of root traits in common bean plants at two ontogenetic stages and two soil P levels. Twenty-four common bean genotypes, comprising the four growth habits that exist in the species and two wild genotypes, were grown in 4 kg pots at two levels of applied P (20 and 80 mg kg-1) and harvested at the stages of pod setting and early pod filling. Root area and root length were measured by digital image analysis. Significant genotype × P level and genotype × harvest interactions in analysis of variance indicate that the genotypic variation of root traits depended on soil nutrient availability and the stage at which evaluation was made. Genotypes differed for taproot mass, basal and lateral root mass, root area and root length at both P levels and growth stages; differences in specific root area and length were small. Genotypes with growth habits II (upright indeterminate) and III (prostrate indeterminate) showed better adaptation to limited P supply than genotypes of groups I (determinate) and IV (indeterminate climbing). Between the two harvests, genotypes of groups II and III increased the mass of basal and lateral roots by 40 and 50 %, respectively, whereas genotypes of groups I and IV by only 7 and 19 %. Values of the genotypic coefficient of determination, which estimates the proportion of phenotypic variance resulting from genetic effects, were higher at early pod filling than at pod setting. Correlations between shoot mass and root mass, which could indicate indirect selection of root systems via aboveground biomass, were higher at early pod filling than at pod setting. The results indicate that selection for root traits in common bean genotypes should preferentially be performed at the early pod-filling stage.

Sign in / Sign up

Export Citation Format

Share Document