Using diffusive gradients in thin films to probe the kinetics of metal interaction with algal exudates

2011 ◽  
Vol 8 (5) ◽  
pp. 517 ◽  
Author(s):  
Jacqueline Levy ◽  
Hao Zhang ◽  
William Davison ◽  
Rene Groben

Environmental context Interaction of metals with dissolved organic matter is one of the key processes defining metal bioavailability in water. The technique of diffusive gradients in thin films was used to investigate the kinetics of the interaction between metals and dissolved organic matter released by algae. For most metals the rate at which they were released from the organic matter was fast, but release of iron was kinetically limited. AbstractThe interaction of metals with organic matter is one of the key processes determining metal speciation and bioavailability in water. Fulvic acid tends to dominate dissolved organic carbon (DOC) in freshwaters, but organic carbon produced in situ, e.g. exudates released by algae and bacteria, is also significant. The technique of diffusive gradients in thin films (DGT) was used to investigate the lability of metal–exudate complexes using a kinetic signature approach. Exudates were harvested from three cultured freshwater alga (Chlorella vulgaris, Cryptomonas pyrenoidifera, Anabaena flos-aquae) and the filtered media supplemented with trace metals. DGT-labile metal concentrations and kinetic signatures were determined (24-h deployment). The relationship between Fe and DOC was a defining feature of the kinetic signatures. Iron was the most kinetically limited metal followed by Al and Cu, whereas Co, Ni and Pb were effectively completely labile. Exudates from Chlorella vulgaris produced the most DOC and the most marked kinetic limitation.

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
M. Shigemitsu ◽  
T. Yokokawa ◽  
H. Uchida ◽  
S. Kawagucci ◽  
A. Murata

AbstractMicrobial community structure in the hadal water is reported to be different from that in the upper abyssal water. However, the mechanism governing the difference has not been fully understood. In this study, we investigate the vertical distributions of humic-like fluorescent dissolved organic matter (FDOMH), chemoautotrophic production, apparent oxygen utilization (AOU), and N* in the Izu-Ogasawara Trench. In the upper abyssal waters (< 6000 m), FDOMH has a significantly positive correlation with AOU; FDOMH deviates from the relationship and increases with depth without involving the increment of AOU in the hadal waters. This suggests that FDOMH is transferred from the sediments to the hadal waters through pore water, while the FDOMH is produced in situ in the upper abyssal waters. Chemoautotrophic production and N* increases and decreases with depth in the hadal waters, respectively. This corroborates the effluxes of dissolved substances, including dissolved organic matter and electron donors from sediments, which fuels the heterotrophic/chemoautotrophic microbial communities in the hadal waters. A simple box model analysis reveals that the funnel-like trench topography facilitates the increase in dissolved substances with depth in the hadal waters, which might contribute to the unique microbiological community structure in these waters.


Water ◽  
2020 ◽  
Vol 12 (6) ◽  
pp. 1722 ◽  
Author(s):  
Anna Lupon ◽  
Núria Catalán ◽  
Eugènia Martí ◽  
Susana Bernal

Studies exploring how different sources of dissolved organic matter (DOM) influence in-stream dissolved organic carbon (DOC) uptake at the ecosystem scale are scarce in the literature. To fill this knowledge gap, we examined the relationship between DOM sources and in-stream net DOC uptake (UDOC) in a sub-humid Mediterranean stream. We considered four reach-scale scenarios occurring under natural conditions that differed in predominant DOM sources (groundwater, leaf litter, and/or upstream water). Results showed that groundwater inputs favored in-stream net DOC uptake, while leaf litter inputs promoted in-stream net DOC release. However, there was no clear effect of DOM source mixing on the magnitude of UDOC. Further, the variability in UDOC within and among scenarios was mostly explained by stream DOC concentration, suggesting that DOC availability limits microbial activity in this stream. DOM composition became a controlling factor of UDOC variability only during the leaf litter period, when stream DOC concentration was the highest. Together, these results suggest that the capacity of headwater forested streams to process DOC is closely tied to the availability of different DOM sources and how they vary over time and along the river network.


2016 ◽  
Author(s):  
Urban Johannes Wünsch ◽  
Boris Peter Koch ◽  
Matthias Witt ◽  
Joseph Andrew Needoba

Abstract. The in situ detection of fluorescent dissolved organic matter (FDOM) at high temporal resolution is a powerful proxy to follow dissolved organic matter (DOM) dynamics and DOM flux to coastal oceans when FDOM measurements and dissolved organic carbon (DOC) are highly correlated. Here, we investigated the relationship between FDOM sensors and DOC concentration in the lower Columbia River, USA in spring and summer 2013. Furthermore, we studied the seasonal variability of FDOM and chromophoric DOM (CDOM) optical indices, as well as the seasonal and spatial variability for the molecular characteristics of DOM using ultrahigh resolution electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). The fieldwork was conducted concurrently with the operation of in situ sensor platforms that recorded physical and biogeochemical data at hourly intervals. In situ FDOM and DOC concentration was highly correlated and the relationship was used to quantify the river's DOC flux between March and August 2013. The average flux was 0.93 Gg d−1, which included over three-fold temporal variability (0.45 to 1.62 Gg d−1) associated with seasonal biogeochemical variability. Spectrofluorometry measurements demonstrated that FDOM parameters correlated with major seasonal biogeochemical shifts in the river associated with phytoplankton blooms and river discharge and thus revealed predictable seasonal patterns in DOM quality. FT-ICR-MS analyses elucidated these shifts on the molecular level: the relative abundance of 561 formulas, most of which contained N and S, correlated significantly with chlorophyll a, while 417 formulas (mostly CHO) correlated with CDOM absorbance at 254 nm.


2012 ◽  
Vol 9 (10) ◽  
pp. 13743-13771 ◽  
Author(s):  
A. Matsuoka ◽  
S. B. Hooker ◽  
A. Bricaud ◽  
B. Gentili ◽  
M. Babin

Abstract. A series of papers have suggested that freshwater discharge, including a large amount of dissolved organic matter (DOM), has increased since the middle of the 20th century. In this study, a semi-analytical algorithm for estimating light absorption coefficients of the colored fraction of DOM (CDOM) was developed for Southern Beaufort Sea waters using remote sensing reflectance at six wavelengths in the visible spectral domain corresponding to MODIS ocean color sensor. This algorithm allows to separate colored detrital matter (CDM) into CDOM and non-algal particles (NAP) by determining NAP absorption using an empirical relationship between NAP absorption and particle backscattering coefficients. Evaluation using independent datasets, that were not used for developing the algorithm, showed that CDOM absorption can be estimated accurately to within an uncertainty of 35% and 50% for oceanic and turbid waters, respectively. In situ measurements showed that dissolved organic carbon (DOC) concentrations were tightly correlated with CDOM absorption (r2 = 0.97). By combining the CDOM absorption algorithm together with the DOC versus CDOM relationship, it is now possible to estimate DOC concentrations in the near-surface layer of the Southern Beaufort Sea using satellite ocean color data. DOC concentrations in the surface waters were estimated using MODIS ocean color data, and the estimates showed reasonable values compared to in situ measurements. We propose a routine and near real-time method for deriving DOC concentrations from space, which may open the way to an estimate of DOC budgets for Arctic coastal waters.


Author(s):  
Jeonghyun Kim ◽  
Yeseul Kim ◽  
Sung Eun Park ◽  
Tae-Hoon Kim ◽  
Bong-Guk Kim ◽  
...  

AbstractIn Jeju Island, multiple land-based aquafarms were fully operational along most coastal region. However, the effect of effluent on distribution and behaviours of dissolved organic matter (DOM) in the coastal water are still unknown. To decipher characteristics of organic pollution, we compared physicochemical parameters with spectral optical properties near the coastal aquafarms in Jeju Island. Absorption spectra were measured to calculate the absorption coefficient, spectral slope coefficient, and specific UV absorbance. Fluorescent DOM was analysed using fluorescence spectroscopy coupled with parallel factor analysis. Dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) were measured using high-temperature catalytic oxidation. The DOC concentration near the discharge outlet was twice higher than that in natural groundwater, and the TDN concentration exponentially increased close to the outlet. These distribution patterns indicate that aquafarms are a significant source of DOM. Herein, principal component analysis was applied to categorise the DOM origins. There were two distinct groups, namely, aquaculture activity for TDN with humic-like and high molecular weights DOM (PC1: 48.1%) and natural biological activity in the coastal water for DOC enrichment and protein-like DOM (PC2: 18.8%). We conclude that the aquafarms significantly discharge organic nitrogen pollutants and provoke in situ production of organic carbon. Furthermore, these findings indicate the potential of optical techniques for the efficient monitoring of anthropogenic organic pollutants from aquafarms worldwide.


2008 ◽  
Vol 5 (2) ◽  
pp. 281-298 ◽  
Author(s):  
P. Raimbault ◽  
N. Garcia ◽  
F. Cerutti

Abstract. During the BIOSOPE cruise the RV Atalante was dedicated to study the biogeochemical properties in the South Pacific between the Marquesas Islands (141° W–8° S) and the Chilean upwelling (73° W–34° S). Over the 8000 km covered by the cruise, several different trophic situations were encountered, in particular strong oligotrophic conditions in the South Pacific Gyre (SPG, between 123° W and 101° W). In this isolated region, nitrate was undetectable between the surface and 160–180 m and only trace quantities (<20 nmoles l−1) of regenerated nitrogen (nitrite and ammonium) were detected, even in the subsurface maximum. Integrated nitrate over the photic layer, which reached 165 m, was close to zero. Despite this severe nitrogen-depletion, phosphate was always present in significant concentrations (≈0.1 μmoles l−1), while silicic acid was maintained at low but classical oceanic levels (≈1 μmoles l−1). In contrast, the Marquesas region (MAR) to the west and Chilean upwelling (UPW) to the east were characterized by high nutrient concentrations, one hundred to one thousand fold higher than in the SPG. The distribution of surface chlorophyll reflected the nitrate gradient, the lowest concentrations (0.023 nmoles l−1) being measured at the centre of the SPG, where integrated value throughout the photic layer was very low (≈ 10 mg m−2). However, due to the relatively high concentrations of chlorophyll-a encountered in the DCM (0.2 μg l−1), chlorophyll-a concentrations throughout the photic layer were less variable than nitrate concentrations (by a factor 2 to 5). In contrast to chlorophyll-a, integrated particulate organic matter (POM) remained more or less constant along the study area (500 mmoles m−2, 60 mmoles m−2 and 3.5 mmoles m−2 for particulate organic carbon, particulate organic nitrogen and particulate organic phosphorus, respectively), with the exception of the upwelling, where values were two fold higher. The residence time of particulate carbon in the surface water was only 4–5 days in the upwelling, but up to 30 days in the SPG, where light isotopic δ15N signal noted in the suspended POM suggests that N2-fixation provides a dominant supply of nitrogen to phytoplankton. The most striking feature was the large accumulation of dissolved organic matter (DOM) in the SPG compared to the surrounding waters, in particular dissolved organic carbon (DOC) where concentrations were at levels rarely measured in oceanic waters (>100 μmoles l−1). Due to this large pool of DOM in the SPG photic layer, integrated values followed a converse geographical pattern to that of inorganic nutrients with a large accumulation in the centre of the SPG. Whereas suspended particulate matter in the mixed layer had a C/N ratio largely conforming to the Redfield stochiometry (C/N≈6.6), marked deviations were observed in this excess DOM (C/N≈16 to 23). The marked geographical trend suggests that a net in situ source exists, mainly due to biological processes. Thus, in spite of strong nitrate-depletion leading to low chlorophyll biomass, the closed ecosystem of the SPG can accumulate large amounts of C-rich dissolved organic matter. The implications of this finding are examined, the conclusion being that, due to weak lateral advection, the biologically produced dissolved organic carbon can be accumulated and stored in the photic layer for very long periods. In spite of the lack of seasonal vertical mixing, a significant part of new production (up to 34%), which was mainly supported by dinitrogen fixation, can be exported to deep waters by turbulent diffusion in terms of DOC. The diffusive rate estimated in the SPG (134 μmolesC m−2 d−1), was quite equivalent to the particles flux measured by sediments traps.


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