Assessment of phenotypic diversity in pearl millet [Pennisetum glaucum (L.) R. Br.] germplasm of Indian origin and identification of trait-specific germplasm

2016 ◽  
Vol 67 (12) ◽  
pp. 1223 ◽  
Author(s):  
Jyoti Kumari ◽  
Manas K. Bag ◽  
S. Pandey ◽  
S. K. Jha ◽  
S. S. Chauhan ◽  
...  
Keyword(s):  
Disease Resistance ◽  
Pearl Millet ◽  
Agronomic Traits ◽  
Pennisetum Glaucum ◽  
Phenotypic Diversity ◽  
Principal Component ◽  
Leaf Length ◽  
Distribution Analysis ◽  
Antioxidants Activity ◽  
Germplasm Collections

Evaluation of genetic diversity within germplasm collections and identification of trait-specific germplasm is a basic requirement for plant breeders. A total of 221 Indian pearl millet collections from the National Genebank were characterised and evaluated for 27 agro-morphological descriptors. Considerable variation was observed for all characters. Frequency distribution analysis showed predominance of cylindrical and compact spike, grey seeds, earliness (less than 40 days to spike emergence). Hierarchical clustering method was used for classifying 221 pearl millet accessions based on agronomic and disease resistance traits, which resulted into three clusters. Clusters 1, 2 and 3 comprised 91, 54 and 76 accessions respectively. There was high correspondence between the geographic collection sites of accessions and their inclusion in particular clusters. In addition, principal component analysis was used for data reduction and generating biplot. First four principal components explained 66.43% of total variability. Among the traits analysed, plant height, nodes/plant, days to spike emergence, number of tillers, leaf width and leaf length are major contributor towards phenotypic diversity. Further the trait-specific germplasm were identified for agronomic traits, disease resistance, popping and antioxidants activity, namely for earliness (IC343664, IC343689, IC343661, IC309064), spike girth (IC283693, IC283842, IC367638), dual purpose with high grain and fodder yield (IC283705, IC283745, IC283885 and IC335901 and so on). Four accessions of pearl millet germplasm viz., IC309064, IC393365, IC306465 and IC283866, were observed as multiple disease resistant. This study suggested that application of appropriate techniques and their interpretations provide more efficient way to identify potential accessions and improve the utilisation of germplasm collections in plant breeding.

Genotype × environment interaction and genetic association of grain iron and zinc content with other agronomic traits in RIL population of pearl millet

2018 ◽  
Vol 69 (11) ◽  
pp. 1092
Author(s):  
Tripti Singhal ◽  
C. Tara Satyavathi ◽  
Aruna Kumar ◽  
S. Mukesh Sankar ◽  
S. P. Singh ◽  
...  
Keyword(s):  
Pearl Millet ◽  
Agronomic Traits ◽  
Pennisetum Glaucum ◽  
Recombinant Inbred Lines ◽  
Selection Index ◽  
Principal Component ◽  
Zinc Content ◽  
Environment Interaction ◽  
Genotype Environment Interaction ◽  
Zn Content

Biofortification of lines of pearl millet (Pennisetum glaucum (L.) R.Br.) with increased iron (Fe) and zinc (Zn) will have great impact because pearl millet is an indispensable component of food and nutritional security of inhabitants of arid and semi-arid regions. The aim of the present study was to assess the stability of Fe and Zn content in recombinant inbred lines (RILs) developed for grain Fe and Zn content, and to use these lines in developing micronutrient-rich pearl millet hybrids. A mapping population consisting of 210 RILs along, with parents and checks, was assessed in three consecutive years (2014–16) under rainfed conditions at the same experimental location in an alpha design with two repetitions. Significant differences were observed in genotype, environment and genotype × environment interaction mean squares for all variables, particularly grain micronutrients. The first two principal components of an interaction principal component analysis cumulatively explained 100% of the total variation; respective contributions of the first and second components were 64.0% and 36.0% for Fe, and 58.1% and 41.9% for Zn. A positive and moderately high correlation (0.696**) between Fe and Zn contents suggests good prospects of simultaneous improvement for both micronutrients. Among the 210 RILs, RIL 69, RIL 186, RIL 191, RIL 149 and RIL 45 were found to be more stable with higher mean micronutrient content, additive main effects and multiplicative interaction stability value (ASV) and genotype selection index (GSI) under rainfed condition. These RILs are promising and can be tested further for their combining ability for yield as well as grain micronutrient content for developing superior biofortified, heterotic pearl millet hybrids.

scholarly journals Genetic divergence of Nigerian and Indian pearl millet accessions based on agronomical and morphological traits

2017 ◽  
Vol 62 (2) ◽  
pp. 115-131
Author(s):  
David Animasaun ◽  
Joseph Morakinyo ◽  
Rama Krishnamurthy ◽  
Oba Mustapha
Keyword(s):  
Plant Height ◽  
Pearl Millet ◽  
Morphological Traits ◽  
Genetic Relatedness ◽  
Agronomic Traits ◽  
Crop Improvement ◽  
Principal Component ◽  
Leaf Length ◽  
Leaf Width ◽  
Number Of Leaves

The study assessed the genetic diversity of pearl millet accessions grown in Nigeria and India based on morpho-agronomic traits in order to identify genotypes with superior characters which could be utilized in breeding programmes. Twenty-four pearl millet accessions were grown and evaluated for agronomic and morphological traits during the dry and wet seasons of 2015-2016. Data collected on the accessions using standard descriptors were analysed statistically. IP22281 had the highest mean plant height (108.90 cm) while NGB00531 recorded the lowest (61.02 cm). Significant intra-specific variation existed in number of leaves per plant, leaf length, leaf width, number of nodes and internode length, however, stem girth was similar for the accessions. Tillering was generally poor with the highest value (1.60 tillers per plant) found in NGB00531. A significant positive correlation occurred between plant height, number of leaves, leaf length and leaf width. Panicles emerged between 44 and 56 days and NGB00548 had the shortest maturity time. Also, panicle length and peduncle diameter varied significantly for the accessions. The highest grain yield and 1000-grain weight were recorded in NGB00616 and the lowest yield and weight were recorded in IP22269. The principal component analysis grouped the accessions into four clusters, comprising mixtures of Nigerian and Indian members. Similarly, the dendrogram grouped the accessions into two main groups which were sub-divided into smaller clusters with accessions from Nigeria and India in the same cluster. The study concludes that variations in morpho-agronomic and yield characters among the accessions studied could be harnessed for crop improvement. The clustering pattern of these accessions indicated their genetic relatedness, possibly from the same progenitor, but separation by geographical or ecological isolation mechanisms.

scholarly journals Exploring morpho-physiological profiles of a collection of tomato (Solanum lycopersicum) germplasm using multivariate statistics

2020 ◽  
Vol 18 (2) ◽  
pp. 88-97
Author(s):  
Ifigeneia Mellidou ◽  
Konstantinos Krommydas ◽  
Irini Nianiou-Obeidat ◽  
Georgia Ouzounidou ◽  
Apostolos Kalivas ◽  
...  
Keyword(s):  
Solanum Lycopersicum ◽  
Phenotypic Diversity ◽  
Diversity Index ◽  
Total Yield ◽  
Morphological Characteristics ◽  
Principal Component ◽  
Fruit Shape ◽  
Qualitative Traits ◽  
Germplasm Collections ◽  
Wide Range

AbstractA selection of tomato (Solanum lycopersicum L.) genotypes with diverse origin and breeding history including 33 landraces, eight modern varieties and two commercial hybrids has been characterized using a set of 25 qualitative descriptors and six quantitative traits. A wide range of variation was evident for the majority of traits, highlighting their utility for characterizing tomato germplasm collections. A plethora of qualitative traits including type of leaf blade, depression and ribbing at peduncle end, fruit shape at blossom end, number of locules and flowering time, as well as measured traits with economic importance such as fruit fresh weight, firmness and total yield per plant, were found to be highly variable within the collection, with a diversity index greater than 0.8. Strong correlations were detected among several traits related to fruit yield and quality. Two-dimensional principal component analysis as well as the unsupervised hierarchical clustering grouped genotypes according to their phenotypic resemblance and morphological characteristics to a great extent. Landraces from different origins were scattered across the whole variation spectrum of PC1 and PC2. A set of six qualitative traits could efficiently discriminate cultivars in PCA (explaining 75% of total variation), suggesting that it can serve as a valuable breeding tool for the germplasm characterization. The evaluation of the phenotypic diversity in the collection as well as the identification of traits that contribute most to heterogeneity have important implications for establishing core collections with high diversity, as well as designing breeding schemes across the Mediterranean basin.

Genetic diversity among accessions of Solanum aethiopicum L. groups based on morpho-agronomic traits

2012 ◽  
Vol 10 (3) ◽  
pp. 177-185 ◽  
Author(s):  
O. T. Adeniji ◽  
P. M. Kusolwa ◽  
S. O. W. M. Reuben
Keyword(s):  
Field Experiments ◽  
Agronomic Traits ◽  
Correlation Coefficients ◽  
Principal Component ◽  
Leaf Length ◽  
Multiple Traits ◽  
Discriminatory Ability ◽  
Fruit Length ◽  
Solanum Aethiopicum ◽  
Breeding Programmes

Solanum aethiopicum L. is indigenous to Africa and constitutes an important vegetable. Morpho-agronomic traits were used to study diversity among 44 accessions of S. aethiopicum groups to identify traits of high discriminatory ability and donor parents with specific or multiple traits for introgression and utilization in breeding programmes. Field experiments were conducted from 2008 to 2010. The principal component (PC) analysis of morpho-agronomic data indicated high discriminatory ability for fruit calyx length, fruit length and leaf length. On PC1, fruit length showed positive and significant correlation coefficients with leaf length, fruit calyx length and width. An independent association was recorded among fruit width, fruits per infructescence and seed yield (t/ha). Ordination (biplot) and grouping (dendrogram) revealed genetic variation and relatedness, phenotypic plasticity and geographical heterogeneity among the accessions within and among the clusters. Members of cluster 1 (group ‘c’) are a promising donor parent for multiple traits (earliness and fruit length), and members of group ‘b’ are superior for fruits per plant, fruits per infructescence and fruit infructescence per plant. Hybridization among distant clusters would provide an opportunity for bringing together gene constellations of diverse background. Earliness and fruit length were highly variable among the S. aethiopicum groups. The results are important for the breeding and selection of this crop.

Effect of cytoplasm and cytoplasm-nuclear interaction on combining ability and heterosis for agronomic traits in pearl millet {Pennisetum glaucum (L) Br. R}

Euphytica ◽  
2006 ◽  
Vol 153 (1-2) ◽  
pp. 15-26 ◽  
Author(s):  
A. C. Chandra-Shekara ◽  
B. M. Prasanna ◽  
B. B. Singh ◽  
K. V. Unnikrishnan ◽  
A. Seetharam
Keyword(s):  
Pearl Millet ◽  
Combining Ability ◽  
Agronomic Traits ◽  
Pennisetum Glaucum ◽  
Nuclear Interaction

Development of SCAR marker associated with downy mildew disease resistance in pearl millet (Pennisetum glaucum L.)

2014 ◽  
Vol 41 (12) ◽  
pp. 7815-7824 ◽  
Author(s):  
Sudisha Jogaiah ◽  
R. G. Sharathchandra ◽  
Niranjan Raj ◽  
A. B. Vedamurthy ◽  
H. Shekar Shetty
Keyword(s):  
Disease Resistance ◽  
Downy Mildew ◽  
Pearl Millet ◽  
Scar Marker ◽  
Pennisetum Glaucum ◽  
Downy Mildew Disease

scholarly journals Characterization of West and Central African accessions from a pearl millet reference collection for agro-morphological traits and Striga resistance

2017 ◽  
Vol 16 (3) ◽  
pp. 260-272 ◽  
Author(s):  
F. T. Sattler ◽  
M. D. Sanogo ◽  
I. A. Kassari ◽  
I. I. Angarawai ◽  
K. W. Gwadi ◽  
...  
Keyword(s):  
Pearl Millet ◽  
Pennisetum Glaucum ◽  
Principal Component ◽  
Field Trials ◽  
Morphological Characterization ◽  
Striga Hermonthica ◽  
Effective Population ◽  
Reference Collection ◽  
Breeding Programmes

AbstractTo promote the utilization of West and Central African (WCA) genetic resources of pearl millet [Pennisetum glaucum (L.) R. Br.], this study aimed at agro-morphological characterization of selected accessions from the pearl millet reference collection, established by the Generation Challenge Program and the International Crops Research Institute for the Semi-Arid Tropics (ICRISAT). A total of 81 accessions were included, comprising 78 landraces originating from 13, predominantly WCA countries and three improved cultivars. All 81 accessions were evaluated together with 18 checks for resistance to the parasitic weed Striga hermonthica (Del.) Benth. in an artificially infested field at one location in Niger. Determined by available seed quantity, 74 accessions were characterized together with seven checks in the rainy season 2009 in field trials under low-input and fertilized conditions in Nigeria, Niger and Mali, respectively. Wide ranges were observed for various traits. Several accessions were identified as sources for specific traits of interest, i.e. long panicles, high-grain density, earliness, Striga resistance and stable yielding across environments. The observed yield inferiority of all Genebank accessions compared with checks may indicate lost adaptation or inbreeding depression due to an insufficient effective population size during multiplication. A principal component analysis revealed an immense diversity but also strong admixture among the tested accessions, i.e. there were no clearly distinct groups. The seed of all genotypes is available from ICRISAT. The online availability of the characterization data is expected to facilitate efficient use of these pearl millet accessions by breeding programmes in WCA and worldwide.

Generation mean analysis of pearl millet [Pennisetum glaucum (L.) R. Br.] grain iron and zinc contents and agronomic traits in West Africa

2020 ◽  
Vol 96 ◽  
pp. 103066
Author(s):  
Bassirou Sani Boubacar Gaoh ◽  
Prakash I. Gangashetty ◽  
Riyazaddin Mohammed ◽  
Daniel Kwadjo Dzidzienyo ◽  
Pangirayi Tongoona
Keyword(s):  
West Africa ◽  
Pearl Millet ◽  
Agronomic Traits ◽  
Pennisetum Glaucum ◽  
Generation Mean Analysis ◽  
Iron And Zinc
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