Charge Localisation in Heavy Alkali Metal Ion Complexes of 4,4'-Biphenyldicarboxylate

2016 ◽  
Vol 69 (5) ◽  
pp. 505 ◽  
Author(s):  
Jack Harrowfield ◽  
Pierre Thuéry

Crystal structure determinations on the isomorphous RbI and CsI complexes of 4,4′-biphenyldicarboxylate have shown the carboxylate entities to be coordinated in an unusual fashion where both oxygen atoms are in a tetrahedral environment indicative of negative charge localisation on each. The metal ions also show a highly irregular form of six-coordination, while the biphenyl units are planar, seemingly as a result of attractive interactions between the ortho hydrogen atoms.

2019 ◽  
Vol 2020 (6) ◽  
pp. 523-531 ◽  
Author(s):  
Yulia S. Kudyakova ◽  
Pavel A. Slepukhin ◽  
Marina S. Valova ◽  
Yanina V. Burgart ◽  
Viktor I. Saloutin ◽  
...  

2003 ◽  
Vol 81 (1) ◽  
pp. 53-63 ◽  
Author(s):  
Erwin Buncel ◽  
Ruby Nagelkerke ◽  
Gregory RJ Thatcher

In continuation of our studies of alkali metal ion catalysis and inhibition at carbon, phosphorus, and sulfur centers, the role of alkali metal ions in nucleophilic displacement reactions of p-nitrophenyl phenylphosphonate (PNPP) has been examined. All alkali metal ions studied acted as catalysts. Alkali metal ions added as inert salts increased the rate while decreased rate resulted on M+ complexation with 18-crown-6 ether. Kinetic analysis indicated the interaction of possibly three potassium ions, four sodium ions, and five lithium ions in the transition state of the reactions of ethoxide with PNPP. Pre-association of the anionic substrate with two metals ions in the ground state gave the best fit to the experimental data of the sodium system. Thus, the study gives evidence of the role of several metal ions in nucleophilic displacement reactions of ethoxide with anionic PNPP, both in the ground state and in the transition state. Molecular modeling of the anionic transition state implies that the size of the monovalent cation and the steric requirement of the pentacoordinate transition state are the primary limitations on the number of cations that can be brought to bear to stabilize the transition state and catalyze nucleophilic substitution at phosphorus. The bearing of the present work on metal ion catalysis in enzyme systems is discussed, in particular enzymes that catalyze phosphoryl transfer, which often employ multiple metal ions. Our results, both kinetic and modeling, reveal the importance of electrostatic stabilization of the transition state for phosphoryl transfer that may be effected by multiple cations, either monovalent metal ions or amino acid residues. The more such cations can be brought into contact with the anionic transition state, the greater the catalysis observed.Key words: alkali metal ion catalysis, nucleophilic displacement at phosphorus, multiple metal ion catalysis, phosphoryl transfer.


2021 ◽  
Author(s):  
Xinli Li ◽  
Ju Zhang ◽  
Yunsheng Dai ◽  
Congming Tang ◽  
Chenglong Yang

The sustainable production of 2,3-pentanedione from bio-lactic acid was investigated over the alkali metal ion intercalated laminar aluminum phosphate. The confined alkali metal ions by the adjacent layers of aluminum...


2016 ◽  
Vol 14 (3) ◽  
pp. 1153-1160 ◽  
Author(s):  
Yong-Jay Lee ◽  
Tsung-Hsien Ho ◽  
Chien-Chen Lai ◽  
Sheng-Hsien Chiu

The most suitable alkali metal ions for templating the assembly of various homo- and hetero-[2]catenanes from the diamines containing central di-, tri-, and tetra(ethylene glycol) motifs, and isophthalaldehyde are investigated.


2014 ◽  
Vol 43 (8) ◽  
pp. 3153-3161 ◽  
Author(s):  
Andrea Perrin ◽  
Dominic Myers ◽  
Katharina Fucke ◽  
Osama M. Musa ◽  
Jonathan W. Steed

The highly polar nature of lactam carbonyl groups makes them potent chelators of alkali metal ions as part of a flexible podand ligand.


2009 ◽  
Vol 133 (5) ◽  
pp. 497-509 ◽  
Author(s):  
Dezső Boda ◽  
Mónika Valiskó ◽  
Douglas Henderson ◽  
Bob Eisenberg ◽  
Dirk Gillespie ◽  
...  

A physical model of selective “ion binding” in the L-type calcium channel is constructed, and consequences of the model are compared with experimental data. This reduced model treats only ions and the carboxylate oxygens of the EEEE locus explicitly and restricts interactions to hard-core repulsion and ion–ion and ion–dielectric electrostatic forces. The structural atoms provide a flexible environment for passing cations, thus resulting in a self-organized induced-fit model of the selectivity filter. Experimental conditions involving binary mixtures of alkali and/or alkaline earth metal ions are computed using equilibrium Monte Carlo simulations in the grand canonical ensemble. The model pore rejects alkali metal ions in the presence of biological concentrations of Ca2+ and predicts the blockade of alkali metal ion currents by micromolar Ca2+. Conductance patterns observed in varied mixtures containing Na+ and Li+, or Ba2+ and Ca2+, are predicted. Ca2+ is substantially more potent in blocking Na+ current than Ba2+. In apparent contrast to experiments using buffered Ca2+ solutions, the predicted potency of Ca2+ in blocking alkali metal ion currents depends on the species and concentration of the alkali metal ion, as is expected if these ions compete with Ca2+ for the pore. These experiments depend on the problematic estimation of Ca2+ activity in solutions buffered for Ca2+ and pH in a varying background of bulk salt. Simulations of Ca2+ distribution with the model pore bathed in solutions containing a varied amount of Li+ reveal a “barrier and well” pattern. The entry/exit barrier for Ca2+ is strongly modulated by the Li+ concentration of the bath, suggesting a physical explanation for observed kinetic phenomena. Our simulations show that the selectivity of L-type calcium channels can arise from an interplay of electrostatic and hard-core repulsion forces among ions and a few crucial channel atoms. The reduced system selects for the cation that delivers the largest charge in the smallest ion volume.


2003 ◽  
Vol 9 (3) ◽  
pp. 800-810 ◽  
Author(s):  
Gianluca Ambrosi ◽  
Paolo Dapporto ◽  
Mauro Formica ◽  
Vieri Fusi ◽  
Luca Giorgi ◽  
...  

1988 ◽  
Vol 251 (3) ◽  
pp. 667-675 ◽  
Author(s):  
M Vasseur ◽  
G Van Melle ◽  
R Frangne ◽  
F Alvarado

For rabbit intestinal brush-border sucrase, a model based on classical Michaelis-Dixon theory cannot fully explain the peculiar antagonistic relationship existing between the substrate and one key proton, Hx, which at acid pH values behaves as a fully competitive inhibitor. In the same pH range, a second proton, Hy, is responsible for changes in catalytic activity and behaves as a mixed-type partially non-competitive inhibitor [Vasseur, Tellier & Alvarado (1982) Arch. Biochem. Biophys. 218, 263-274]. Although involved in the same ionization reaction, these two protons have different kinetic functions, since they are responsible for affinity-type and capacity-type effects respectively. Depending on whether Hx is bound or not, we postulate the enzyme to alternate between two distinct forms differing in their binding properties. The alkali-metal ions Na+ and Li+ have a concentration-dependent biphasic effect on this equilibrium. At low concentrations they facilitate the release of Hx, resulting in K-type activation. At higher concentrations they favour enzyme reprotonation, causing K-type inhibition. On the basic side of the pH spectrum, our results confirm the existence of separate non-competitive effects of the alkali-metal ions, particularly Li+ [Alvarado & Mahmood (1979) J. Biol. Chem. 254, 9534-9541]. To explain the molecular mechanisms underlying the alkali-metal-ion- and H+-dependent effects, we formulate a sucrase model, the three-protons model, in which the acid and basic ionization constants involve respectively two and one key prototropic groups that are functionally distinguishable. A global iterative fit of the relevant general equation to our whole set of data has permitted us to estimate the numerical value of each of the constants constituting the model.


2012 ◽  
Vol 468-471 ◽  
pp. 1501-1507 ◽  
Author(s):  
Hong Ling Tan ◽  
Cong Ying Jia ◽  
Chao Xiang ◽  
Ying Xiang Yang

Calculate the electronic structure of alkali metal ion-doped Zn crystal, based on density functional theory (DFT) first-principles plane-wave ultra-soft pseudo-potential method. Analyze the band structure of alkali metal ion-doped ZnO crystal, and the electronic density of states. The results indicated that in theory, the doping of alkali metal ions are able to form a p-type ZnO semiconductor, and introduce in the deep acceptor levels. In the actual substitution process, the dopant ions may enter the interstitial site. Thus the alkali metal ions are tending to become donor interstitial impurities. In addition, since the ionic radius of K is larger than the ionic radiuses of Li and Na. And K+ formed the minimum acceptor level (0.078eV), which is a shallow acceptor level. K+ is better than Li+ and Na+ as a dopant. In short, they are not good p-type dopants.


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