Halogenated Terpenoids. XXIX The 1-Bromo 1-Bromomethyl Cyclohexyl System

1997 ◽  
Vol 50 (7) ◽  
pp. 689 ◽  
Author(s):  
Douglas J. Brecknell ◽  
Raymond M. Carman ◽  
Ross A. Edwards ◽  
Karl A. Hansford ◽  
Tomislav Karoli ◽  
...  
Keyword(s):  
Free Energy ◽  
Bromine Atom ◽  
Methyl Group ◽  
X Ray ◽  
X Ray Crystallography ◽  
Bromo Derivative ◽  
A Value ◽  
Derivative Free ◽  
Methylene Groups

Bromination of methylene groups exocyclic to cyclohexyl systems normally affords two isomeric products; the axial 1-bromo equatorial 1-bromomethyl compound and the axial 1-bromomethyl equatorial 1-bromo derivative. Free energy differences between these two isomers, and the conformations adopted by the axial 1-bromomethyl group, have been explored by n.m.r. spectroscopy, by X-ray crystallography and by MM3 calculations. Evidence is presented to show that the ax-bromomethyl group exists primarily as those rotamers which site the bromine atom synclinal to the vicinal bromine. The A value for a bromomethyl group in this system is then similar to that of an unsubstituted methyl group.

The Pyrolytic Rearrangement of 1-Alkynoyl-3-methylpyrazoles: Synthesis of Pyrazolo[1,5-a]pyridin-5-ols and Related Compounds

1994 ◽  
Vol 47 (6) ◽  
pp. 991 ◽  
Author(s):  
RFC Brown ◽  
FW Eastwood ◽  
GD Fallon ◽  
SC Lee ◽  
RP Mcgeary
Keyword(s):  
Carbon Chain ◽  
Ring Structure ◽  
High Yield ◽  
Methyl Group ◽  
X Ray ◽  
X Ray Crystallography ◽  
Flash Vacuum Pyrolysis ◽  
Vacuum Pyrolysis ◽  
Fused Ring ◽  
Related Compounds

Flash vacuum pyrolysis of 1-(alkyn-2′-oyl)-3-methylpyrazoles at 650°/0.03 mm forms pyrazolo[1,5-a]pyridin-5-ols, often in high yield, which may bear substituents at C2, C3 or C7. In the absence of a 3-methyl group in the precursor, N-ethynylpyrazoles are formed in low yield. The formation of both types of product is interpreted as involving 3-(N-pyrazolyl)propadienones formed by N1 → N2 migration of the N-alkynoyl group with inversion of the three-carbon chain. The fused-ring structure of 2-methylpyrazolo[1,5-a]pyridin-5-ol (25) was established by X-ray crystallography of the O-benzoyl derivative (27).

The crystal structure of ethyl-Z-3-amino-2-benzoyl-2-butenoate and measurement of the barrier to E,Z-isomerization

1980 ◽  
Vol 58 (17) ◽  
pp. 1821-1828 ◽  
Author(s):  
Gary D. Fallon ◽  
Bryan M. Gatehouse ◽  
Allan Pring ◽  
Ian D. Rae ◽  
Josephine A. Weigold
Keyword(s):  
Crystal Structure ◽  
Nuclear Magnetic Resonance ◽  
Hydrogen Bond ◽  
Free Energy ◽  
Magnetic Resonance ◽  
Energy Of Activation ◽  
X Ray ◽  
X Ray Crystallography ◽  
Free Energy Of Activation ◽  
Nuclear Magnetic

Ethyl-3-amino-2-benzoyl-2-butenoate crystallizes from pentane as either the E (mp 82–84 °C) or the Z-isomer (mp 95.5–96.5 °C). The E isomer is less stable, and changes spontaneously into the Z, which bas been identified by X-ray crystallography. The structure is characterised by an N–H/ester CO hydrogen bond and a very long C2—C3 bond (1.39 Å). Nuclear magnetic resonance methods have been used to measure the rate of [Formula: see text] isomerization at several temperatures, leading to the estimate that the free energy of activation at 268 K is 56 ± 8 kJ.

Structure and nuclear magnetic resonance spectra of 6-bromo-3,3′,4′,5,7-penta-O-methylcatechin

1985 ◽  
Vol 63 (8) ◽  
pp. 2176-2180 ◽  
Author(s):  
F. W. B. Einstein ◽  
E. Kiehlmann ◽  
E. K. Wolowidnyk
Keyword(s):  
Nuclear Magnetic Resonance ◽  
Magnetic Resonance ◽  
Title Compound ◽  
Bromine Atom ◽  
Heterocyclic Ring ◽  
Equatorial Orientation ◽  
X Ray ◽  
X Ray Crystallography ◽  
Nuclear Magnetic Resonance Spectra ◽  
Ring Conformations

The title compound has been synthesized by selective debromination of 6,8-dibromocatechin and indirect methylation of the resulting 6-bromocatechin via its pentaacetate. The structure of C20H23BrO6 has been determined by X-ray crystallography. The compound crystallizes in the space group P1 with a = 9.589(3) Å, b = 11.576(3) Å, c = 11.326(3) Å, α = 118.80(3)°, β = 93.23(3)°, γ = 111.44(3)°, ρc = 1.481 g cm−3, and Z = 2. Intensities were measured for 2584 independent reflections (2θ < 45°) of which 2213 were observed (I > 3.0σ(I)) and used in subsequent refinement (final R values were R = 0.0268 and Rw = 0.0344). Crystallographic and pmr data confirm the position of the bromine atom at C-6, the trans-diaxial arrangement of H-2/H-3 and the quasi-equatorial orientation of the 3,4-dimethoxyphenyl group (ring B). The two heterocyclic ring conformations are consistent with the expected flexibility of the molecule.

scholarly journals X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A2A Adenosine Receptor Antagonists

2019 ◽  
Author(s):  
Willem Jespers ◽  
Grégory Verdon ◽  
Jhonny Azuaje ◽  
maria majellaro ◽  
Henrik Keränen ◽  
...  
Keyword(s):  
Free Energy ◽  
Adenosine Receptor ◽  
Free Energy Calculations ◽  
Binding Modes ◽  
A2a Adenosine Receptor ◽  
Binding Model ◽  
Energy Calculations ◽  
X Ray ◽  
X Ray Crystallography ◽  
Pharmacological Data

<div> <div> <div> <p>Nowadays, rigorous free energy calculations are routinely considered in pharmaceutical design strategies. One typical sce- nario is the lead-optimization based on well-defined protein-ligand binding modes, inferred by pharmacological data in com- putational models and ultimately revealed by structural data. In this work, we reveal the molecular determinants of antago- nist binding to the adenosine A2A adenosine receptor (AR), an emerging target in immuno-oncology, via a robust protocol that connects structural and pharmacological data through free energy perturbation (FEP) calculations. Eight A2AAR binding site mutations from biophysical mapping experiments were initially analyzed with FEP simulations of each side-chain mutation, performed on alternate binding modes previously proposed in the literature. The results strongly suggested that only one binding mode could explain this experimental data, which was used to subsequently design a series of 11 chromone deriva- tives. The experimental affinities of these new compounds were linked through a cycle of ligand-FEP calculations around selected ligand pairs, which allowed the identification of the optimal positioning of the different chemical substituents in the proposed binding model. Subsequent X-ray crystallography of the A2AAR with a low and high affinity chromone derivative confirmed the predicted binding orientation, and provided new insights in the role of the explored substituents in the chro- </p> </div> </div> <div> <div> <p>mone scaffold. </p> </div> </div> </div>

scholarly journals Spin-Crossover in Iron(II) Complexes of N,N′-Disubstituted 2,6-Bis(Pyrazol-3-yl)Pyridines: An Effect of a Distal Substituent in the 2,6-Dibromophenyl Group

Crystals ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 922
Author(s):  
Igor A. Nikovskiy ◽  
Alexander V. Polezhaev ◽  
Valentin V. Novikov ◽  
Dmitry Yu. Aleshin ◽  
Rinat R. Aysin ◽  
...  
Keyword(s):  
Nmr Spectroscopy ◽  
Spin Crossover ◽  
Molecular Design ◽  
Variable Temperature ◽  
Bromine Atom ◽  
X Ray Diffraction ◽  
Methyl Group ◽  
X Ray ◽  
Active Iron ◽  
Switchable Materials

A series of new bis(pyrazol-3-yl)pyridines (LR) N,N′-disubstituted by 4-functionalized 2,6-dibromophenyl groups have been synthesized to study the effect of a distal substituent on the spin-crossover (SCO) behaviour of the iron(II) complexes [Fe(LR)2](ClO4)2 by variable-temperature magnetometry, NMR spectroscopy, and X-ray diffraction. The SCO-assisting tendency of the substituents with different electronic and steric properties (i.e., the bromine atom and the methyl group) in the para-position of the 2,6-dibromophenyl group is discussed. Together with earlier reported SCO-active iron(II) complexes with N,N′-disubstituted bis(pyrazol-3-yl)pyridines, these new complexes open the way for this family of SCO compounds to emerge as an effective ‘tool’ in revealing structure–function relations, a prerequisite for successful molecular design of switchable materials for future breakthrough applications in sensing, switching, and memory devices.

scholarly journals X‐Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A 2A Adenosine Receptor Antagonists

2020 ◽  
Vol 59 (38) ◽  
pp. 16536-16543 ◽  
Author(s):  
Willem Jespers ◽  
Grégory Verdon ◽  
Jhonny Azuaje ◽  
Maria Majellaro ◽  
Henrik Keränen ◽  
...  
Keyword(s):  
Free Energy ◽  
Adenosine Receptor ◽  
Free Energy Calculations ◽  
Binding Mechanism ◽  
Receptor Antagonists ◽  
Energy Calculations ◽  
X Ray ◽  
X Ray Crystallography

scholarly journals X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A2A Adenosine Receptor Antagonists

2019 ◽  
Author(s):  
Willem Jespers ◽  
Grégory Verdon ◽  
Jhonny Azuaje ◽  
maria majellaro ◽  
Henrik Keränen ◽  
...  
Keyword(s):  
Free Energy ◽  
Adenosine Receptor ◽  
Free Energy Calculations ◽  
Binding Modes ◽  
A2a Adenosine Receptor ◽  
Binding Model ◽  
Energy Calculations ◽  
X Ray ◽  
X Ray Crystallography ◽  
Pharmacological Data

<div> <div> <div> <p>Nowadays, rigorous free energy calculations are routinely considered in pharmaceutical design strategies. One typical sce- nario is the lead-optimization based on well-defined protein-ligand binding modes, inferred by pharmacological data in com- putational models and ultimately revealed by structural data. In this work, we reveal the molecular determinants of antago- nist binding to the adenosine A2A adenosine receptor (AR), an emerging target in immuno-oncology, via a robust protocol that connects structural and pharmacological data through free energy perturbation (FEP) calculations. Eight A2AAR binding site mutations from biophysical mapping experiments were initially analyzed with FEP simulations of each side-chain mutation, performed on alternate binding modes previously proposed in the literature. The results strongly suggested that only one binding mode could explain this experimental data, which was used to subsequently design a series of 11 chromone deriva- tives. The experimental affinities of these new compounds were linked through a cycle of ligand-FEP calculations around selected ligand pairs, which allowed the identification of the optimal positioning of the different chemical substituents in the proposed binding model. Subsequent X-ray crystallography of the A2AAR with a low and high affinity chromone derivative confirmed the predicted binding orientation, and provided new insights in the role of the explored substituents in the chro- </p> </div> </div> <div> <div> <p>mone scaffold. </p> </div> </div> </div>

The Characterization Of Organic Charge Transfer Superconductors By Microreflectance Spectroscopy

1990 ◽  
Vol 48 (2) ◽  
pp. 272-273
Author(s):  
S. L. Hill ◽  
K. Krishnan ◽  
J. R. Ferraro
Keyword(s):  
Charge Transfer ◽  
Single Crystal ◽  
Beta Phase ◽  
Alpha Phase ◽  
X Ray Diffraction ◽  
X Ray ◽  
X Ray Crystallography ◽  
A Value ◽  
Charge Transfer Salts

Certain classes of organic charge-transfer salts demonstrate superconducting behavior at liquid helium temperatures. Single crystal x-ray diffraction and infrared microreflectance analysis have been performed on several conducting systems to associate the nature of the crystalline structure with the electrical conductivity. The infrared spectrum for a single crystal salt exhibits absorptions which correlate with superconducting behavior.Discussion Williams and coworkers have performed x-ray Crystallography experiments to demonstrate the presence of an anion cavity between radical cation stacks- of bis(ethylenedithio)- tetrathiafulvalene (ET). The sulfur…sulfur interstack distance in a beta or kappa phase salt assumes a value less than the Vanderwaals distance and exhibit a superconducting (two dimensional) metal behavior (verified by Fermi surface calculations) at 1-20K. The structures of alpha and beta phase ET2I3 suggest the potential for several potential intermolecular interaction modes. It may be observed that the beta phase permits both interstack as well as H … X anionic interactions, whereas these interactions are less likely to occur in the alpha phase.

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