scholarly journals Molecular search with conformational change: One-dimensional discrete-state stochastic model

2018 ◽  
Vol 149 (17) ◽  
pp. 174104 ◽  
Author(s):  
Jaeoh Shin ◽  
Anatoly B. Kolomeisky
1996 ◽  
Vol 61 (2) ◽  
pp. 242-258 ◽  
Author(s):  
Vladimír Kudrna ◽  
Libor Vejmola ◽  
Pavel Hasal

Recently developed stochastic model of a one-dimensional flow-through chemical reactor is extended in this paper also to the non-isothermal case. The model enables the evaluation of concentration and temperature profiles along the reactor. The results are compared with the commonly used one-dimensional dispersion model with Danckwerts' boundary conditions. The stochastic model also enables to evaluate a value of the segregation index.


1975 ◽  
Vol 12 (2) ◽  
pp. 153-162 ◽  
Author(s):  
Sezar Fesciyan ◽  
H. L. Frisch

2018 ◽  
Vol 2018 ◽  
pp. 1-13 ◽  
Author(s):  
Rachel Waema Mbogo ◽  
Livingstone S. Luboobi ◽  
John W. Odhiambo

Malaria is one of the three most dangerous infectious diseases worldwide (along with HIV/AIDS and tuberculosis). In this paper we compare the disease dynamics of the deterministic and stochastic models in order to determine the effect of randomness in malaria transmission dynamics. Relationships between the basic reproduction number for malaria transmission dynamics between humans and mosquitoes and the extinction thresholds of corresponding continuous-time Markov chain models are derived under certain assumptions. The stochastic model is formulated using the continuous-time discrete state Galton-Watson branching process (CTDSGWbp). The reproduction number of deterministic models is an essential quantity to predict whether an epidemic will spread or die out. Thresholds for disease extinction from stochastic models contribute crucial knowledge on disease control and elimination and mitigation of infectious diseases. Analytical and numerical results show some significant differences in model predictions between the stochastic and deterministic models. In particular, we find that malaria outbreak is more likely if the disease is introduced by infected mosquitoes as opposed to infected humans. These insights demonstrate the importance of a policy or intervention focusing on controlling the infected mosquito population if the control of malaria is to be realized.


1975 ◽  
Vol 13 (3) ◽  
pp. 277-278
Author(s):  
Sezar Fesciyan ◽  
H. L. Frisch

Entropy ◽  
2020 ◽  
Vol 22 (12) ◽  
pp. 1348
Author(s):  
Paul Manneville ◽  
Masaki Shimizu

In line with Pomeau’s conjecture about the relevance of directed percolation (DP) to turbulence onset/decay in wall-bounded flows, we propose a minimal stochastic model dedicated to the interpretation of the spatially intermittent regimes observed in channel flow before its return to laminar flow. Numerical simulations show that a regime with bands obliquely drifting in two stream-wise symmetrical directions bifurcates into an asymmetrical regime, before ultimately decaying to laminar flow. The model is expressed in terms of a probabilistic cellular automaton of evolving von Neumann neighborhoods with probabilities educed from a close examination of simulation results. It implements band propagation and the two main local processes: longitudinal splitting involving bands with the same orientation, and transversal splitting giving birth to a daughter band with an orientation opposite to that of its mother. The ultimate decay stage observed to display one-dimensional DP properties in a two-dimensional geometry is interpreted as resulting from the irrelevance of lateral spreading in the single-orientation regime. The model also reproduces the bifurcation restoring the symmetry upon variation of the probability attached to transversal splitting, which opens the way to a study of the critical properties of that bifurcation, in analogy with thermodynamic phase transitions.


2017 ◽  
Vol 31 (31) ◽  
pp. 1750249
Author(s):  
Stefano Longhi

The interaction of a discrete state coupled to a continuum is a longstanding problem of major interest in different areas of quantum and classical physics. In Hermitian models, several dynamical decoupling schemes have been suggested, in which the discrete-continuum interaction can be substantially reduced and even suppressed. In this work, we consider a discrete state interacting with a continuum via a time-dependent non-Hermitian coupling with finite (albeit arbitrarily long) duration, and show rather generally that for a wide class of coupling temporal shapes, in which the real and imaginary parts of the coupling are related each other by a Hilbert transform, the discrete state returns to its initial condition after the interaction with the continuum, while the continuum keeps trace of the interaction. Such a behavior, which does not have any counterpart in Hermitian dynamics, can be referred to as non-Hermitian pseudo decoupling. Non-Hermitian pseudo decoupling is illustrated by considering a non-Hermitian extension of the Fano–Anderson model in a one-dimensional tight-binding lattice. Such a non-Hermitian model can describe, for example, photonic hopping dynamics in a tight-binding chain of optical microrings or resonators, in which non-Hermitian coupling can be realized by fast modulation of the real and imaginary (gain/loss) parts of the refractive index of the edge microring.


1990 ◽  
Vol 146 (3) ◽  
pp. 433-444 ◽  
Author(s):  
G. Zumofen ◽  
J. Klafter ◽  
A. Blumen

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