One‐dimensional diffusion into a multilayer structure: An exact solution for a bilayer

1992 ◽  
Vol 72 (10) ◽  
pp. 4674-4676 ◽  
Author(s):  
R. B. Goldner ◽  
K. K. Wong ◽  
T. E. Haas
Keyword(s):  
Exact Solution ◽  
Multilayer Structure ◽  
One Dimensional ◽  
Dimensional Diffusion

scholarly journals On a Generalization of One-Dimensional Kinetics

Mathematics ◽  
2021 ◽  
Vol 9 (11) ◽  
pp. 1264
Author(s):  
Vladimir V. Uchaikin ◽  
Renat T. Sibatov ◽  
Dmitry N. Bezbatko
Keyword(s):  
Exact Solution ◽  
Asymptotic Behavior ◽  
Constant Velocity ◽  
Telegraph Equation ◽  
Material Derivative ◽  
Symmetric Random Walk ◽  
One Dimensional ◽  
Special Cases ◽  
Fractional Telegraph Equation ◽  
Asymmetric Case

One-dimensional random walks with a constant velocity between scattering are considered. The exact solution is expressed in terms of multiple convolutions of path-distributions assumed to be different for positive and negative directions of the walk axis. Several special cases are considered when the convolutions are expressed in explicit form. As a particular case, the solution of A. S. Monin for a symmetric random walk with exponential path distribution and its generalization to the asymmetric case are obtained. Solution of fractional telegraph equation with the fractional material derivative is presented. Asymptotic behavior of its solution for an asymmetric case is provided.

scholarly journals Hopping and Flipping of RNA Polymerase on DNA during Recycling for Reinitiation after Intrinsic Termination in Bacterial Transcription

2021 ◽  
Vol 22 (5) ◽  
pp. 2398
Author(s):  
Wooyoung Kang ◽  
Seungha Hwang ◽  
Jin Young Kang ◽  
Changwon Kang ◽  
Sungchul Hohng
Keyword(s):  
Single Molecule ◽  
Transcription Initiation ◽  
Molecular Mechanisms ◽  
Facilitated Diffusion ◽  
One Dimensional ◽  
Bacterial Transcription ◽  
Fluorescence Measurements ◽  
Dimensional Diffusion ◽  
Single Molecule Studies ◽  
Hopping Diffusion

Two different molecular mechanisms, sliding and hopping, are employed by DNA-binding proteins for their one-dimensional facilitated diffusion on nonspecific DNA regions until reaching their specific target sequences. While it has been controversial whether RNA polymerases (RNAPs) use one-dimensional diffusion in targeting their promoters for transcription initiation, two recent single-molecule studies discovered that post-terminational RNAPs use one-dimensional diffusion for their reinitiation on the same DNA molecules. Escherichia coli RNAP, after synthesizing and releasing product RNA at intrinsic termination, mostly remains bound on DNA and diffuses in both forward and backward directions for recycling, which facilitates reinitiation on nearby promoters. However, it has remained unsolved which mechanism of one-dimensional diffusion is employed by recycling RNAP between termination and reinitiation. Single-molecule fluorescence measurements in this study reveal that post-terminational RNAPs undergo hopping diffusion during recycling on DNA, as their one-dimensional diffusion coefficients increase with rising salt concentrations. We additionally find that reinitiation can occur on promoters positioned in sense and antisense orientations with comparable efficiencies, so reinitiation efficiency depends primarily on distance rather than direction of recycling diffusion. This additional finding confirms that orientation change or flipping of RNAP with respect to DNA efficiently occurs as expected from hopping diffusion.

On Approximate Large Deviations for 1D Diffusion

2003 ◽  
Vol 10 (2) ◽  
pp. 381-399
Author(s):  
A. Yu. Veretennikov
Keyword(s):  
Differential Equation ◽  
Exact Solution ◽  
Large Deviations ◽  
Stochastic Differential Equation ◽  
Approximation Scheme ◽  
Sufficient Conditions ◽  
Rate Function ◽  
Euler Approximation ◽  
One Dimensional

Abstract We establish sufficient conditions under which the rate function for the Euler approximation scheme for a solution of a one-dimensional stochastic differential equation on the torus is close to that for an exact solution of this equation.

An exact solution for one-dimensional unsteady nonlinear groundwater flow

Meccanica ◽  
1991 ◽  
Vol 26 (2-3) ◽  
pp. 129-133
Author(s):  
Vittorio di Federico
Keyword(s):  
Exact Solution ◽  
Groundwater Flow ◽  
One Dimensional
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