On the performance of output queued cell switches with non-uniformly distributed bursty arrivals

2006 ◽  
Vol 153 (2) ◽  
pp. 201 ◽  
Author(s):  
I. Elhanany ◽  
B. Matthews
Keyword(s):  
Genetics ◽  
1991 ◽  
Vol 127 (3) ◽  
pp. 489-496 ◽  
Author(s):  
A J Klar ◽  
M J Bonaduce ◽  
R Cafferkey

Abstract The interconversion of cell type in the fission yeast, Schizosaccharomyces pombe, is initiated by a double-stranded break (DSB) found at the mating type locus (mat1). A heritable site- and strand-specific DNA "imprinting" event at mat1 was recently hypothesized to be required to make the mat1 locus cleavable, and the DSB was suggested to be produced one generation before the actual switching event. It is known that only one cell among four granddaughters of a cell ever switches, and the sister of the recently switched cell switches efficiently in consecutive cell divisions. The feature of consecutive switching creates a major difficulty of having to replicate chromosomes possessing the DSB. The mat1 cis-acting leaky mutation, called smt-s, reduces the level of the DSB required for switching and is shown here to be a 27-bp deletion located 50 bp away from the cut site. Determination of the pattern and frequency of switching of the mutant allele by cell lineage studies has allowed us to conclude the following: (1) the chromosome with the DSB is sealed and replicated, then one of the specific chromatids is cleaved again to generate switching-competent cells in consecutive cell divisions and (2) the smt-s mutation affects DNA cleavage and not the hypothesized DNA imprinting step.


2011 ◽  
Vol 19 (1) ◽  
pp. 142-155 ◽  
Author(s):  
Andrea Bianco ◽  
David Hay ◽  
Fabio Neri
Keyword(s):  

Development ◽  
1990 ◽  
Vol 108 (Supplement) ◽  
pp. 3-8
Author(s):  
Amar J. S. Klar

Mating types of the fission yeast Schizosaccharomyces pombe interchange nonrandomly in a cell lineage so that only one cell among four granddaughters of a cell ever switches, and the sister of the newly switched cell switches efficiently in consecutive cell divisions, thereby producing chains of recurrent switching. The programme of cellular differentiation is mediated by inheritance of parental DNA chains at the mating type locus (mat1) by progeny cells. This review summarizes recent results suggesting that two types of imprinting events at the mat1 locus are required to generate the specific pattern of switching in a cell lineage. One of those is a site- and strand- specific event that is required before the mat1 locus can be cleaved in vivo. The other is a double-stranded break at mat1 that is healed by gene conversion in the progeny cells resulting in switching the mat1 locus.


2006 ◽  
Vol 16 (10) ◽  
pp. 2985-3005 ◽  
Author(s):  
ANDREW ADAMATZKY ◽  
GENARO JUÁREZ MARTÍNEZ ◽  
JUAN CARLOS SECK TUOH MORA

We study a binary-cell-state eight-cell neighborhood two-dimensional cellular automaton model of a quasi-chemical system with a substrate and a reagent. Reactions are represented by semi-totalistic transitions rules: every cell switches from state 0 to state 1 depending on if the sum of neighbors in state 1 belongs to some specified interval, cell remains in state 1 if the sum of neighbors in state 1 belong to another specified interval. We investigate space-time dynamics of 1296 automata, establish morphology-bases classification of the rules, explore precipitating and excitatory cases and scrutinize collisions between mobile and stationary localizations (gliders, cycle life and still-life compact patterns). We explore reaction–diffusion like patterns produced as a result of collisions between localizations. Also, we propose a set of rules with complex behavior called Life 2c22.


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