Novel domain packing in the crystal structure of a thiosulphate-oxidizing enzyme

2002 ◽  
Vol 30 (4) ◽  
pp. 638-642 ◽  
Author(s):  
V. A. Bamford ◽  
B. C. Berks ◽  
A. M. Hemmings

A key component of the oxidative biogeochemical sulphur cycle involves the utilization by bacteria of reduced inorganic sulphur compounds as electron donors to photosynthetic or respiratory electron transport chains. The SoxAX protein of the photosynthetic bacterium Rhodovulum sulfidophilum is a heterodimeric c-type cytochrome that is involved in the oxidation of thiosulphate and sulphide. The recently solved crystal structure of the SoxAX complex represents the first structurally characterized example of a productive electron transfer complex between haemoproteins where both partners adopt the c-type cytochrome fold. The packing of c-type cytochrome domains both within SoxA and at the interface between the subunits of the complex has been compared with other examples and found to be unique.

Most phototrophic bacteria use reduced inorganic sulphur compounds as electron donors during anoxygenic photosynthesis. Principally, sulphide is oxidized via sulphite to sulphate. Elemental sulphur may appear as intermediary storage product (inside: Chromatium, Thiocapsa ; outside: Chlorbium, Ectothiorhodospira ; not in : Rhodopseudomonas sulfidophila ). Adenosine phosphosulphate is an intermediate in sulphite oxidation by Chromatium, Thiocapsa and Chlorobium . Thiosulphate undergoes splitting to sulphide (or elemental sulphur) and sulphite, or is oxidized to tetrathionate. Sulphide may be oxidized to elemental sulphur by cytochrome c or to thiosulphate (perhaps sulphite?) by flavocytochrome c , or to sulphite by a reverse (sirohaem) sulphite reductase. The latter enzyme also oxidizes polysulphides and probably elemental sulphur. Sulphite is either oxidized by APS reductase to form adenosine phosphosulphate - from which sulphate is released by ADP sulphurylase - or by sulphite: acceptor oxidoreductase directly to sulphate. The electron acceptor of most of these oxidative enzymes are cytochromes or non-haem iron-sulphur proteins. The pathways of photolithotrophic sulphur oxidation in Chlorobiaceae, Chromatiaceae and Rhodospirillaceae are separately compiled under evaluation of the presently available data.


2021 ◽  
Author(s):  
Alexey V. Eliseev ◽  
Rustam D. Gizatullin ◽  
Alexandr V. Timazhev

<p>A stationary, computationally efficient  scheme, ChAP-1.0 (Chemistry and Aerosol Processes, version 1.0) for the sulphur cycle in the troposphereis developed. This scheme is envisaged to be implemented into Earth system models of intermediate complexity (EMICs). The scheme accounts for sulphur dioxide emissions into the atmosphere, its deposition to the surface, oxidation to sulphates, and dry and wet deposition of sulphates on the surface.<br>The calculations with the scheme were performed with the anthropogenic emissions of sulphur compounds into the atmosphere for 1850-2000 according to the CMIP5 (Coupled Models Intercomparison Project, phase 5) 'historical' protocol, with the ERA-Interim meteorology, and assuming that natural sources of sulphur into the atmosphere remain unchanged during this period. The model reasonably reproduces characteristics of the tropospheric sulphur cycle known from observations and other simulations (e.g., in the Atmospheric Chemistry and Climate Model Intercomparison Project phase II (ACCMIP) simulations, Copernicus Atmosphere Monitoring Service (CAMS) reanalysis, and the Meteorological Synthesizing Centre–West of the European Monitoring and Evaluation Programme (EMEP MSC-W) data). In particular, in 1980's and 1990's, , when the global anthropogenic emission of sulphur, global atmospheric burdens of SO<sub>2</sub> and SO<sub>4</sub> account, correspondingly, 0.2 TgS and 0.4 TgS. In our scheme, about half of the emitted sulphur dioxide is deposited to the surface and the rest in oxidised into sulphates. The latter mostly removed from the atmosphere by wet deposition. The lifetime of the SO<sub>2</sub> and SO<sub>4</sub> in the atmosphere is, respectively, 1.0±0.1 days and 4.1±0.3 days.<br>Despite its simplicity, our scheme may be successfully used to simulate sulphur/sulphates pollution in the atmosphere at coarse spatial and time scales and an impact of this pollution to direct radiative effect of sulphates on climate, their respective indirect (cloud- and precipitation-related) effects, as well as an impact of sulphur compounds on the terrestrial carbon cycle.</p>


2009 ◽  
Vol 84 (2) ◽  
pp. 349-356 ◽  
Author(s):  
Hiromichi Suzuki ◽  
Masahide Daimon ◽  
Tomoyuki Awano ◽  
So Umekage ◽  
Terumichi Tanaka ◽  
...  

1993 ◽  
Vol 2 (2) ◽  
pp. 147-154 ◽  
Author(s):  
Longyin Chen ◽  
F. Scott Mathews ◽  
Victor L. Davidson ◽  
Mariella Tegoni ◽  
Claudio Rivetti ◽  
...  

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