NUCLEOTIDE SEQUENCE OF 16S RIBOSOMAL RNA FROM P. VULGARIS AND ITS USE IN BUILDING OF A SECONDARY STRUCTURE MODEL FOR 16S RIBOSOMAL RNA OF E.COLI

1981 ◽  
Vol 9 (2) ◽  
pp. 297P-297P
Author(s):  
P. Carbon ◽  
P. Stiegler ◽  
M. Zucker ◽  
C. Ehresmann ◽  
J. P. Ebel
Keyword(s):  
Secondary Structure ◽  
Nucleotide Sequence ◽  
Ribosomal Rna ◽  
16S Ribosomal Rna ◽  
Structure Model ◽  
Secondary Structure Model

scholarly journals Secondary structure model for bacterial 16S ribosomal RNA: phylogenetic, enzymatic and chemical evidence

1980 ◽  
Vol 8 (10) ◽  
pp. 2275-2294 ◽  
Author(s):  
C.R. Woese ◽  
L.J. Magrum ◽  
R. Gupta ◽  
R.B. Siegel ◽  
D.A. Stahl ◽  
...  
Keyword(s):  
Secondary Structure ◽  
Ribosomal Rna ◽  
16S Ribosomal Rna ◽  
Structure Model ◽  
Secondary Structure Model ◽  
Chemical Evidence

scholarly journals Evidence on the conformation of HeLa-cell 5.8S ribosomal ribonucleic acid from the reaction of specific cytidine residues with sodium bisulphite

1978 ◽  
Vol 173 (2) ◽  
pp. 521-532 ◽  
Author(s):  
J M Kelly ◽  
J P Goddard ◽  
B E H Maden
Keyword(s):  
Secondary Structure ◽  
Nucleotide Sequence ◽  
Hela Cell ◽  
Primary Structure ◽  
The Other ◽  
Structure Model ◽  
Secondary Structure Model ◽  
Sodium Bisulphite ◽  
5.8S Rrna ◽  
Ribosomal Ribonucleic Acid

The reaction of HeLa-cell 5.8S rRNA with NaHSO3 under conditions in which exposed cytidine residues are deaminated to uridine was studied. It was possible to estimate the reactivities of most of the 46 cytidine residues in the nucleotide sequence by comparing ‘fingerprints’ of the bisulphite-treated RNA with those of untreated RNA. The findings were consistent with the main features of the secondary-structure model for mammalian 5.85S rRNA proposed by Nazar, Sitz, & Busch [J. Biol. Chem (1975) 250, 8591–8597]. Five out of six regions that are depicted in the model as single-stranded loops contain cytidine residues that are reactive towards bisulphite at 25 degrees C (the other loop contains no cytidine). The cytidine residue nearest to the 3′-terminus is also reactive. Several cytidines residues that are internally located within proposed double-helical regions show little or no reactivity towards bisulphite, but the cytidine residues of several C.G pairs at the ends of helical regions show some reactivity, and one of the proposed loops appears to contain six nucleotides, rather than the minimum of four suggested by the primary structure. Two cytidine residues that are thought to be ‘looped out’ by small helix imperfections also show some reactivity.

Cloning and sequence analysis of the 18 S ribosomal RNA gene of tomato and a secondary structure model for the 18 S rRNA of angiosperms

1989 ◽  
Vol 219 (1-2) ◽  
pp. 17-25 ◽  
Author(s):  
Waltraud Schmidt-Puchta ◽  
Gertrud Kütemeier ◽  
Isolde Günther ◽  
Bernd Haas ◽  
Heinz L. Sänger
Keyword(s):  
Sequence Analysis ◽  
Secondary Structure ◽  
Ribosomal Rna ◽  
Structure Model ◽  
Secondary Structure Model ◽  
Ribosomal Rna Gene ◽  
18 S Ribosomal Rna

scholarly journals Secondary structure model for 23S ribosomal RNA

1981 ◽  
Vol 9 (22) ◽  
pp. 6167-6189 ◽  
Author(s):  
Harry F. Noller ◽  
JoAnn Kop ◽  
Virginia Wheaton ◽  
Jürgen Brosius ◽  
Robin R. Gutell ◽  
...  
Keyword(s):  
Secondary Structure ◽  
Ribosomal Rna ◽  
Structure Model ◽  
Secondary Structure Model ◽  
23S Ribosomal Rna

scholarly journals Xenopus laevis28S ribosomal RNA: a secondary structure model and its evolutionary and functional implications

1984 ◽  
Vol 12 (15) ◽  
pp. 6197-6220 ◽  
Author(s):  
C.Graham Clark ◽  
Brian W. Tague ◽  
Vassie C. Ware ◽  
Susan A. Gerbi
Keyword(s):  
Secondary Structure ◽  
Ribosomal Rna ◽  
Structure Model ◽  
Secondary Structure Model ◽  
Functional Implications
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