Gene expression regulation in trypanosomatids

2011 ◽  
Vol 51 ◽  
pp. 31-46 ◽  
Author(s):  
Javier G. De Gaudenzi ◽  
Griselda Noé ◽  
Vanina A. Campo ◽  
Alberto C. Frasch ◽  
Alejandro Cassola

Trypanosomatids are protozoan micro-organisms that cause serious health problems in humans and domestic animals. In addition to their medical relevance, these pathogens have novel biological structures and processes. From nuclear DNA transcription to mRNA translation, trypanosomes use unusual mechanisms to control gene expression. For example, transcription by RNAPII (RNA polymerase II) is polycistronic, and only a few transcription initiation sites have been identified so far. The sequences present in the polycistronic units code for proteins having unrelated functions, that is, not involved in a similar metabolic pathway. Owing to these biological constraints, these micro-organisms regulate gene expression mostly by post-transcriptional events. Consequently, the function of proteins that recognize RNA elements preferentially at the 3′ UTR (untranslated region) of transcripts is central. It was recently shown that mRNP (messenger ribonucleoprotein) complexes are organized within post-transcriptional operons to co-ordinately regulate gene expression of functionally linked transcripts. In the present chapter we will focus on particular characteristics of gene expression in the so-called TriTryp parasites: Trypanosoma cruzi, Trypanosoma brucei and Leishmania major.

Author(s):  
Martin Stephen Charles Larke ◽  
Takayuki Nojima ◽  
Jelena Telenius ◽  
Jacqueline A. Sharpe ◽  
Jacqueline A. Sloane-Stanley ◽  
...  

2013 ◽  
Vol 288 (1) ◽  
pp. 295-295
Author(s):  
Seung-Kyoon Kim ◽  
Inkyung Jung ◽  
Hosuk Lee ◽  
Keunsoo Kang ◽  
Mirang Kim ◽  
...  

2012 ◽  
Vol 287 (47) ◽  
pp. 39698-39709 ◽  
Author(s):  
Seung-Kyoon Kim ◽  
Inkyung Jung ◽  
Hosuk Lee ◽  
Keunsoo Kang ◽  
Mirang Kim ◽  
...  

MicroRNA ◽  
2021 ◽  
Vol 10 ◽  
Author(s):  
Ling Lin ◽  
Kebin Hu

: MicroRNAs (miRNAs) are small non-coding RNAs (19~25 nucleotides) that regulate gene expression at a post-transcriptional level through repression of mRNA translation or mRNA decay. miR-147, which was initially discovered in mouse spleen and macrophages, has been shown to correlate with coronary atherogenesis and inflammatory bowel disease and modulate macrophage functions and inflammation through TLR-4. The altered miR-147 level has been shown in various human diseases, including infectious disease, cancer, cardiovascular disease, a neurodegenerative disorder, etc. This review will focus on the current understanding regarding the role of miR-147 in inflammation and diseases.


2021 ◽  
Vol 81 (5) ◽  
pp. 983-997.e7 ◽  
Author(s):  
Martin S.C. Larke ◽  
Ron Schwessinger ◽  
Takayuki Nojima ◽  
Jelena Telenius ◽  
Robert A. Beagrie ◽  
...  

2019 ◽  
Vol 5 (1) ◽  
pp. 11 ◽  
Author(s):  
Priyanka Barman ◽  
Divya Reddy ◽  
Sukesh Bhaumik

Non-coding antisense transcripts arise from the strand opposite the sense strand. Over 70% of the human genome generates non-coding antisense transcripts while less than 2% of the genome codes for proteins. Antisense transcripts and/or the act of antisense transcription regulate gene expression and genome integrity by interfering with sense transcription and modulating histone modifications or DNA methylation. Hence, they have significant pathological and physiological relevance. Indeed, antisense transcripts were found to be associated with various diseases including cancer, diabetes, cardiac and neurodegenerative disorders, and, thus, have promising potentials for prognostic and diagnostic markers and therapeutic development. However, it is not clearly understood how antisense transcription is initiated and epigenetically regulated. Such knowledge would provide new insights into the regulation of antisense transcription, and hence disease pathogenesis with therapeutic development. The recent studies on antisense transcription initiation and its epigenetic regulation, which are limited, are discussed here. Furthermore, we concisely describe how antisense transcription/transcripts regulate gene expression and genome integrity with implications in disease pathogenesis and therapeutic development.


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