scholarly journals Assembly of chick brain MAP2-tubulin microtubule protein. Characterization of the protein and the MAP2-dependent addition of tubulin dimers

1991 ◽  
Vol 277 (1) ◽  
pp. 231-238 ◽  
Author(s):  
R G Burns
Keyword(s):  
Dynamic Instability ◽  
Protein Characterization ◽  
Minor Components ◽  
Chick Brain ◽  
Stoichiometric Mixture ◽  
Pseudo First Order Reaction ◽  
First Order ◽  
Microtubule Protein ◽  
Assembly Kinetics

The principle proteins present in twice-cycled chick brain microtubule protein were characterized. The protein consists of a stoichiometric mixture of MAP2 and tubulin, together with a number of minor components. Its composition remains unaltered after a third cycle of assembly in a buffer supplemented with 67 mM-NaCl, with the exception of the phosphorylation of MAP2 to a low level (congruent to 1 mol.mol-1). The inclusion of 67 mM-NaCl dissociates the MAP2-tubulin oligomers, and restricts the assembly to the MAP2-dependent addition and loss of tubulin dimers, such that the assembly kinetics approximate to a simple pseudo-first-order reaction. The assembled microtubules exhibit dynamic instability, with no evidence for end-to-end annealing.

scholarly journals Assembly of chick brain MAP2-tubulin microtubule protein. Analysis of tubulin subunit flux rates by immunofluorescence microscopy

1991 ◽  
Vol 277 (1) ◽  
pp. 245-253 ◽  
Author(s):  
M F Symmons ◽  
R G Burns
Keyword(s):  
Close Agreement ◽  
Immunofluorescence Microscopy ◽  
Dynamic Instability ◽  
Theoretical Models ◽  
Chick Brain ◽  
Gtp Hydrolysis ◽  
Tubulin Subunit ◽  
Microtubule Protein ◽  
Cap Model ◽  
Microscopy Method

A filter-based immunofluorescence-microscopy method for obtaining microtubule lengths has been developed and evaluated. Kinetic constants and mean lengths obtained show close agreement with those obtained by complementary methods applied to chick brain MAP2-tubulin microtubule protein in NaCl-supplemented buffer. The filter-based method has been used to estimate tubulin subunit flux (Jon) resulting from isothermal dilution of microtubule populations to various free tubulin concentrations, (c). This experimental Jon(c) plot is significantly different from that predicted by a variety of theoretical models, but is consistent with a ‘lateral cap’ model of dynamic instability [Bayley, Schilstra & Martin (1990) J. Cell. Sci. 95, 33-48] adapted to accommodate the observed vectorial GTP hydrolysis.

scholarly journals Oxidative degradation of gentamicin present in water by an electro-Fenton process and biodegradability improvement

2019 ◽  
Vol 17 (1) ◽  
pp. 1017-1025
Author(s):  
Mohamed Réda Arhoutane ◽  
Muna Shueai Yahya ◽  
Miloud El Karbane ◽  
Kacem El Kacemi
Keyword(s):  
Chemical Oxygen Demand ◽  
Biological Process ◽  
Oxidative Degradation ◽  
Oxygen Demand ◽  
Polluted Water ◽  
Applied Current ◽  
Pseudo First Order Reaction ◽  
First Order ◽  
Appropriate Treatment ◽  
By Products

AbstractIn the context of environmental protection, where there is a need to develop effective operations for carrying out appropriate treatment of polluted water by pharmaceuticals. Therefore, the present study aims at evaluating the degradation for gentamicin through electro-Fenton (EF) operation, through taking into consideration the effect of several parameters of experimental in the process, namely, the concentration of initial gentamicin, the applied current and the Fe+2 (II) quantities. The (EF) operation employed involves a carbon-felt as cathode and platinum as anode at pH 3. Studies for the gentamicin kinetics is monitored by HPLC giving a pseudo-first order reaction following by a chemical oxygen demand, with a reached degree of mineralization 96% after of four hours of treatment through current 100 mA/cm2 with 0.1 mM of Fe+2. We find that the degradation for molecule of gentamicin is accompanied by an augmentation of the biodegradability, assesse through the Biochemical Oxygen Demand (BOD5) on chemical oxygen demand (COD) ratio, that augmentation from 0 to 0.41 before treatment after 30 min for EF treatment, showing that there is potential for conjugation of the EF process and the biological process. Furthermore, the by-products have been identified on the basis of HPLC-MS/MS results.

scholarly journals Characterization of Dissipative Structures for First-Order Symmetric Hyperbolic System with General Relaxation

Mathematics ◽  
2021 ◽  
Vol 9 (7) ◽  
pp. 728
Author(s):  
Yasunori Maekawa ◽  
Yoshihiro Ueda
Keyword(s):  
Hyperbolic System ◽  
Dissipative Structure ◽  
Dissipative Structures ◽  
Algebraic Characterization ◽  
Symmetric Hyperbolic System ◽  
Full Generality ◽  
Order Linear ◽  
First Order

In this paper, we study the dissipative structure of first-order linear symmetric hyperbolic system with general relaxation and provide the algebraic characterization for the uniform dissipativity up to order 1. Our result extends the classical Shizuta–Kawashima condition for the case of symmetric relaxation, with a full generality and optimality.

scholarly journals On Consensus Index of Triplex Star-Like Networks: A Graph Spectra Approach

Symmetry ◽  
2021 ◽  
Vol 13 (7) ◽  
pp. 1248
Author(s):  
Da Huang ◽  
Jian Zhu ◽  
Zhiyong Yu ◽  
Haijun Jiang
Keyword(s):  
Algebraic Connectivity ◽  
Multi Agent Systems ◽  
Graph Spectra ◽  
Asymptotic Behaviors ◽  
Agent Systems ◽  
First Order ◽  
Laplacian Spectra ◽  
Multi Agent ◽  
Consensus Index

In this article, the consensus-related performances of the triplex multi-agent systems with star-related structures, which can be measured by the algebraic connectivity and network coherence, have been studied by the characterization of Laplacian spectra. Some notions of graph operations are introduced to construct several triplex networks with star substructures. The methods of graph spectra are applied to derive the network coherence, and some asymptotic behaviors of the indices have been derived. It is found that the operations of adhering star topologies will make the first-order coherence increase a constant value under the triplex structures as parameters tend to infinity, and the second-order coherence have some equality relations as the node related parameters tend to infinity. Finally, the consensus related indices of the triplex systems with the same number of nodes but non-isomorphic graph structures have been compared and simulated to verify the results.

scholarly journals Odorant-binding protein. Characterization of ligand binding.

1990 ◽  
Vol 265 (11) ◽  
pp. 6118-6125
Author(s):  
J Pevsner ◽  
V Hou ◽  
A M Snowman ◽  
S H Snyder
Keyword(s):  
Ligand Binding ◽  
Binding Protein ◽  
Protein Characterization ◽  
Odorant Binding Protein ◽  
Odorant Binding

scholarly journals Numerical Characterization of Cohesive and Non-Cohesive ‘Sediments’ under Different Consolidation States Using 3D DEM Triaxial Experiments

Processes ◽  
2020 ◽  
Vol 8 (10) ◽  
pp. 1252
Author(s):  
Hadar Elyashiv ◽  
Revital Bookman ◽  
Lennart Siemann ◽  
Uri ten Brink ◽  
Katrin Huhn
Keyword(s):  
Mechanical Response ◽  
Burial Depth ◽  
Cohesive Sediments ◽  
Third Order ◽  
First Order ◽  
Numerical Characterization ◽  
Response To Stress ◽  
Bond Strengths ◽  
Individual Bond

The Discrete Element Method has been widely used to simulate geo-materials due to time and scale limitations met in the field and laboratories. While cohesionless geo-materials were the focus of many previous studies, the deformation of cohesive geo-materials in 3D remained poorly characterized. Here, we aimed to generate a range of numerical ‘sediments’, assess their mechanical response to stress and compare their response with laboratory tests, focusing on differences between the micro- and macro-material properties. We simulated two endmembers—clay (cohesive) and sand (cohesionless). The materials were tested in a 3D triaxial numerical setup, under different simulated burial stresses and consolidation states. Variations in particle contact or individual bond strengths generate first order influence on the stress–strain response, i.e., a different deformation style of the numerical sand or clay. Increased burial depth generates a second order influence, elevating peak shear strength. Loose and dense consolidation states generate a third order influence of the endmember level. The results replicate a range of sediment compositions, empirical behaviors and conditions. We propose a procedure to characterize sediments numerically. The numerical ‘sediments’ can be applied to simulate processes in sediments exhibiting variations in strength due to post-seismic consolidation, bioturbation or variations in sedimentation rates.

scholarly journals Characterization of Glycoside Hydrolase Family 5 Proteins in Schizosaccharomyces pombe

2010 ◽  
Vol 9 (11) ◽  
pp. 1650-1660 ◽  
Author(s):  
Encarnación Dueñas-Santero ◽  
Ana Belén Martín-Cuadrado ◽  
Thierry Fontaine ◽  
Jean-Paul Latgé ◽  
Francisco del Rey ◽  
...  
Keyword(s):  
Cell Wall ◽  
Schizosaccharomyces Pombe ◽  
Protein Characterization ◽  
Wall Material ◽  
Glycoside Hydrolase Family ◽  
Content Type ◽  
Hydrolysis Of ◽  
Controlled Hydrolysis ◽  
Hydrolase Family

ABSTRACT In yeast, enzymes with β-glucanase activity are thought to be necessary in morphogenetic events that require controlled hydrolysis of the cell wall. Comparison of the sequence of the Saccharomyces cerevisiae exo-β(1,3)-glucanase Exg1 with the Schizosaccharomyces pombe genome allowed the identification of three genes that were named exg1 + (locus SPBC1105.05), exg2 + (SPAC12B10.11), and exg3 + (SPBC2D10.05). The three proteins have different localizations: Exg1 is secreted to the periplasmic space, Exg2 is a membrane protein, and Exg3 is a cytoplasmic protein. Characterization of the biochemical activity of the proteins indicated that Exg1 and Exg3 are active only against β(1,6)-glucans while no activity was detected for Exg2. Interestingly, Exg1 cleaves the glucans with an endohydrolytic mode of action. exg1 + showed periodic expression during the cell cycle, with a maximum coinciding with the septation process, and its expression was dependent on the transcription factor Sep1. The Exg1 protein localizes to the septum region in a pattern that was different from that of the endo-β(1,3)-glucanase Eng1. Overexpression of Exg2 resulted in an increase in cell wall material at the poles and in the septum, but the putative catalytic activity of the protein was not required for this effect.

The effect of the textile industry dye bath additive EDTMPA on colour removal characteristics by ozone oxidation

2007 ◽  
Vol 55 (10) ◽  
pp. 145-153 ◽  
Author(s):  
T. Ölmez ◽  
I. Kabdaşlı ◽  
O. Tünay
Keyword(s):  
Organic Matter ◽  
Textile Industry ◽  
Reaction Rates ◽  
Textile Dye ◽  
Pseudo First Order Reaction ◽  
Ozone Oxidation ◽  
Reactive Dyeing ◽  
First Order ◽  
Organic Matter Oxidation ◽  
Pseudo First Order

In this study, the effects of the phosphonic acid based sequestering agent EDTMPA used in the textile dye baths on colour and organic matter removal by ozone oxidation was experimentally investigated. Procion Navy HEXL dyestuff that has been commonly used for the reactive dyeing of cellulose fibers was selected as the model component. The organic matter oxidation by ozone was determined to obey the pseudo-first order kinetics as they are treated singly or in combination. COD removal rates obtained from pseudo-first order reaction kinetics showed that oxidation of Navy HEXL alone (0.0947 L/min) was faster than that of EDTMPA (0.0171 L/min) and EDTMPA with dye (0.0155 L/min) at pH 3.0. It was also found that reaction rates of single EDTMPA removal and EDTMPA and dye mixture removal increased as the reaction pH was increased from 3.0 to 10.5.

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