scholarly journals A stopped-flow kinetic study of soluble methane mono-oxygenase from Methylococcus capsulatus (Bath)

1989 ◽  
Vol 259 (1) ◽  
pp. 167-172 ◽  
Author(s):  
J Green ◽  
H Dalton
Keyword(s):  
Electron Transfer ◽  
Protein C ◽  
Turnover Rate ◽  
Protein A ◽  
Methylococcus Capsulatus ◽  
Bond Breakage ◽  
Conversion Of Methane ◽  
Protein Components ◽  
A Charge ◽  
Rate Limiting

1. The roles of the three protein components of soluble methane mono-oxygenase were investigated by the use of rapid-reaction techniques. The transfer of electrons through the enzyme complex from NADH to methane/O2 was also investigated. 2. Electron transfer from protein C, the reductase component, to protein A, the hydroxylase component, was demonstrated. Protein C was shown to undergo a three-electron--one-electron catalytic cycle. The interaction of protein C with NADH was investigated. Reduction of protein C was shown to be rapid, and a charge-transfer interaction between reduced FAD and NAD+ was observed; this intermediate was also found in static titration experiments. Thus the binding of NADH, the reduction of protein C and the intramolecular transfer of electrons through protein C were shown to be much more rapid than the turnover rate of methane mono-oxygenase. 3. The rate of transfer of electrons from protein C to protein A was shown to be lower than the reduction of protein C but higher than the turnover rate of methane mono-oxygenase. Association of the proteins was not rate-limiting. The amount of protein A present in the system had a small effect on the rate of reduction of protein C, indicating some co-operativity between the two proteins. 4. Protein B was shown to prevent electron transfer between protein C and protein A in the absence of methane. On addition of saturating concentrations of methane electron transfer was restored. With saturating concentrations of methane and O2 the observed rate constant for the conversion of methane into methanol was 0.26 s-1 at 18 degrees C. 5. By the use of [2H4]methane it was demonstrated that C-H-bond breakage is likely to be the rate-limiting step in the conversion of methane into methanol.

Differences in the Interactions of Lupus Anticoagulant IgG with Human Prothrombin and Bovine Prothrombin

1995 ◽  
Vol 73 (04) ◽  
pp. 668-674 ◽  
Author(s):  
L Vijaya Mohan Rao ◽  
An D Hoang ◽  
Samuel I Rapaport
Keyword(s):  
Western Blot ◽  
Lupus Anticoagulant ◽  
Protein A ◽  
Phospholipid Complex ◽  
Experimental Conditions ◽  
Bovine Plasma ◽  
Activation System ◽  
Rate Limiting ◽  
Substantial Extent ◽  
Prothrombin Activation

SummaryLupus anticoagulant (LA) IgGs have been reported to inhibit more effectively and consistently the Xa/Va/phospholipid complex-catalyzed activation of human prothrombin than the Xa/Va/phospholipid complex-catalyzed activation of bovine prothrombin. This led us to carry out studies to determine whether the ability to inhibit the activation of prothrombin of LA IgGs, separated from the plasma of 15 patients by protein A affinity chromatography, could be related to the ability of the LA IgGs to bind to prothrombin under various experimental conditions. Of 14 LA IgG preparations tested all prolonged to a variable but substantial extent the dilute Russell’s viper venom time (dRVVT) of human plasma but only minimally prolonged the dRVVT of bovine plasma. In a purified prothrombin activation system with a rate limiting concentration of phospholipid, all 15 LA IgG preparations inhibited the activation of human prothrombin with the majority showing >50% of inhibition. In contrast, only one LA IgG markedly inhibited (>50%) the activation of bovine prothrombin and five others moderately inhibited (25-40%) the activation of bovine prothrombin. Nevertheless, the majority of LA IgG preparations bound to immobilized bovine prothrombin on a Western blot and also to immobilized bovine prothrombin on a microtiter well. In an ELISA in which phosphatidylserine (PS) was immobilized on microtiter wells, bovine prothrombin supported the binding of 10 of 15 LA IgG preparations to PS. However, the extent of binding was lower than that observed with human prothrombin. In experiments with 125I-human prothrombin or 125I-bovine prothrombin in a solution containing Ca2+, the addition of PS/PC vesicles enhanced the binding of both human and bovine prothrombin to some LA IgG preparations. The enhanced binding was particularly evident for bovine prothrombin. Although seemingly related for some preparations, the ability of a LA IgG to bind to bovine prothrombin, either in the presence or absence of PS, and the ability of that LA IgG to inhibit the activation of bovine prothrombin was not consistently related for all preparations.

scholarly journals Interaction of calcium ions and salivary acidic proline-rich proteins with hydroxyapatite. A possible aspect of inhibition of hydroxyapatite formation

1983 ◽  
Vol 213 (1) ◽  
pp. 11-20 ◽  
Author(s):  
A Bennick ◽  
D Kells ◽  
G Madapallimattam
Keyword(s):  
Crystal Growth ◽  
Calcium Ions ◽  
Binding Sites ◽  
Protein C ◽  
Tryptic Peptide ◽  
Protein A ◽  
Additional Amount ◽  
The Relationship ◽  
Surrounding Liquid ◽  
Hydroxyapatite Formation

The relationship between Ca2+- and hydroxyapatite-binding sites in salivary acidic proline-rich phosphoproteins A and C was investigated. Coating of hydroxyapatite with protein before adsorption had no effect on Ca2+ binding to the mineral, but simultaneous adsorption of Ca+ and protein to hydroxyapatite caused additional Ca2+ binding to the solid. The additional amount of Ca2+ adsorbed, measured in mol of Ca2+/mol of protein adsorbed to hydroxyapatite, was approx. 2 for protein C, 4 for protein A, 9 for the N-terminal tryptic peptide and 2 for dephosphorylated protein A. It is suggested that the ability of the proteins to inhibit hydroxyapatite formation is related to the binding of the proteins to crystal growth sites on the mineral, which prevents access of Ca2+ from the surrounding liquid.

scholarly journals Genomic and Transcriptomic Analyses of the Facultative Methanotroph Methylocystis sp. Strain SB2 Grown on Methane or Ethanol

2014 ◽  
Vol 80 (10) ◽  
pp. 3044-3052 ◽  
Author(s):  
Alexey Vorobev ◽  
Sheeja Jagadevan ◽  
Sunit Jain ◽  
Karthik Anantharaman ◽  
Gregory J. Dick ◽  
...  
Keyword(s):  
Methane Oxidation ◽  
Coenzyme A ◽  
Draft Genome ◽  
Carbon Assimilation ◽  
Tca Cycle ◽  
Content Type ◽  
The Tca Cycle ◽  
Conversion Of Methane ◽  
Oxidative Transformations ◽  
Rate Limiting

ABSTRACTA minority of methanotrophs are able to utilize multicarbon compounds as growth substrates in addition to methane. The pathways utilized by these microorganisms for assimilation of multicarbon compounds, however, have not been explicitly examined. Here, we report the draft genome of the facultative methanotrophMethylocystissp. strain SB2 and perform a detailed transcriptomic analysis of cultures grown with either methane or ethanol. Evidence for use of the canonical methane oxidation pathway and the serine cycle for carbon assimilation from methane was obtained, as well as for operation of the complete tricarboxylic acid (TCA) cycle and the ethylmalonyl-coenzyme A (EMC) pathway. Experiments withMethylocystissp. strain SB2 grown on methane revealed that genes responsible for the first step of methane oxidation, the conversion of methane to methanol, were expressed at a significantly higher level than those for downstream oxidative transformations, suggesting that this step may be rate limiting for growth of this strain with methane. Further, transcriptomic analyses ofMethylocystissp. strain SB2 grown with ethanol compared to methane revealed that on ethanol (i) expression of the pathway of methane oxidation and the serine cycle was significantly reduced, (ii) expression of the TCA cycle dramatically increased, and (iii) expression of the EMC pathway was similar. Based on these data, it appears thatMethylocystissp. strain SB2 converts ethanol to acetyl-coenzyme A, which is then funneled into the TCA cycle for energy generation or incorporated into biomass via the EMC pathway. This suggests that some methanotrophs have greater metabolic flexibility than previously thought and that operation of multiple pathways in these microorganisms is highly controlled and integrated.

Regulation of lung surfactant secretion

1990 ◽  
Vol 258 (6) ◽  
pp. L241-L253 ◽  
Author(s):  
A. Chander ◽  
A. B. Fisher
Keyword(s):  
Lung Surfactant ◽  
Protein A ◽  
Lamellar Body ◽  
Surfactant Protein ◽  
Ventilation Rate ◽  
Future Research ◽  
Surfactant Secretion ◽  
Vasopressin Receptors ◽  
Protein Components

Secretion of lung surfactant is the direct step in release of the lipoprotein-like product, synthesized in lung epithelial type II cells, onto the alveolar surface. Release of surfactant phosphatidylcholine (PC) proceeds via formation of surface pores during exocytosis of lamellar bodies. Surfactant secretion is regulated locally in the lung by changes in ventilation rate, possibly mediated by distension and altered intracellular pH. Secretion is also stimulated by various agents, including agonists for beta-adrenergic, purinoceptors, and vasopressin receptors and is associated with increased cytosolic Ca2+, cellular adenosine 3',5'-cyclic monophosphate, and activation of protein kinases. Limited studies suggest that secretion of surfactant protein A may be regulated by both cAMP-dependent and protein kinase C-dependent pathways. The integration of these various mechanisms for the in vivo regulation of surfactant secretion remains largely unexplored. Future research into the mechanisms involved in lamellar body fusion with the plasma membrane, role of protein phosphorylation, transient changes in cAMP and Ca2+, and coordination between the secretion of phospholipid and protein components of surfactant should enhance our understanding of secretion of surfactant “lipoprotein.”

The Drosophila Hrb98DE locus encodes four protein isoforms homologous to the A1 protein of mammalian heterogeneous nuclear ribonucleoprotein complexes

1990 ◽  
Vol 10 (1) ◽  
pp. 316-323
Author(s):  
S R Haynes ◽  
G Raychaudhuri ◽  
A L Beyer
Keyword(s):  
Protein A ◽  
Protein Isoforms ◽  
Alternative Promoters ◽  
Splice Acceptor ◽  
Heterogeneous Nuclear Ribonucleoprotein ◽  
Rich Domain ◽  
Ribonucleoprotein Complexes ◽  
Early Embryos ◽  
Protein Components ◽  
Nuclear Ribonucleoprotein

The Drosophila Hrb98DE locus encodes proteins that are highly homologous to the mammalian A1 protein, a major component of heterogeneous nuclear ribonucleoprotein (RNP) particles. The Hrb98DE locus is transcribed throughout development, with the highest transcript levels found in ovaries, early embryos, and pupae. Eight different transcripts are produced by the use of combinations of alternative promoters, exons, and splice acceptor sites; the various species are not all equally abundant. The 3'-most exon is unusual in that it is completely noncoding. These transcripts can potentially generate four protein isoforms that differ in their N-terminal 16 to 21 amino acids but are identical in the remainder of the protein, including the RNP consensus motif domain and the glycine-rich domain characteristic of the mammalian A1 protein. We suggest that these sequence differences could affect the affinities of the proteins for RNA or other protein components of heterogeneous nuclear RNP complexes, leading to differences in function.

Δ Protein, a New Fibrous Protein of Skeletal Muscle: Complex Formation With Myosin

1957 ◽  
Vol 188 (2) ◽  
pp. 219-226 ◽  
Author(s):  
Howard B. Bensusan ◽  
John I. White ◽  
Sylvia Himmelfarb ◽  
Brigitte E. Blankenhorn ◽  
William R. Amberson
Keyword(s):  
Skeletal Muscle ◽  
Complex Formation ◽  
Protein C ◽  
Protein A ◽  
Myosin Molecule ◽  
Fibrous Proteins ◽  
Fibrous Protein ◽  
Rapid Fall ◽  
Boundary Cell ◽  
Muscle Complex

A complex, Δ-myosin, is formed by the union of myosin with Δ protein. This complex may be demonstrated in several ways: a) it appears as a separate peak on the patterns of descending boundaries in electrophoresis, and has a mobility intermediate between the mobilities of myosin and D protein. b) It may be detected in the patterns of the ascending boundaries by the increase in the area of the myosin peak and the decrease in the area of free D protein. c) It may be seen in ultracentrifuge diagrams, and is best demonstrated in the synthetic boundary cell. In the mixtures of the three fibrous proteins, myosin, actin and Δ protein, it can be shown that Δ-myosin exists in the presence of an excess of actin. When isoviscous solutions of Δ protein and actomyosin are mixed, there is a rapid fall in viscosity. This fall indicates that some of the actomyosin has been dissociated. The Δ protein then unites with the free myosin to form Δ-myosin. Since Δ-myosin sediments more slowly than does the free myosin, and since the viscosity falls slightly when isoviscous solutions of Δ protein and myosin are mixed, we suggest that the myosin molecule is split during formation of the complex.

scholarly journals The effect of magnesium ions on the diemthylaniline oxidation rate and electron transfer in liver microsomal fraction

1973 ◽  
Vol 136 (2) ◽  
pp. 371-379 ◽  
Author(s):  
A. I. Archakov ◽  
I. I. Karuzina ◽  
I. S. Kokareva ◽  
G. I. Bachmanova
Keyword(s):  
Electron Transfer ◽  
Fluorescence Quantum Yield ◽  
Sharp Increase ◽  
Microsomal Fraction ◽  
Magnesium Ions ◽  
Total Rate ◽  
Nadph Oxidation ◽  
Liver Microsomal Fraction ◽  
Rate Limiting ◽  
Cytochrome P 450

1. Reactions of N-demethylation, p-hydroxylation and N-oxidation of one substrate, i.e. dimethylaniline, have been used to show that the activating effect of Mg2+ takes place only in the first two reactions. 2. An increase in Vmax. of N-demethylation of dimethylaniline is accompanied by an increase in Km. In the p-hydroxylation of dimethylaniline Vmax. increases whereas Km does not change. A comparison of the changes in the Km values of these reactions with the change in Ks shows that in both cases Km does not characterize the affinity of cytochrome P-450 for dimethylaniline. 3. The rate-limiting site of N-demethylation and p-hydroxylation of dimethylaniline, as well as the total rate of NADPH oxidation in the presence of dimethylaniline, is between cytochromes b5 and P-450. Addition of Mg2+ to the incubation medium changes the hydrophobic environment of phosphatidylcholine in the membrane, the process being accompanied by a sharp increase in the fluorescence quantum yield of 8-anilinonaphthalene-1-sulphonate.

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