scholarly journals The structural basis for neutrophil inactivation of C1̅ inhibitor

1989 ◽  
Vol 258 (1) ◽  
pp. 193-198 ◽  
Author(s):  
P A Pemberton ◽  
R A Harrison ◽  
P J Lachmann ◽  
R W Carrell

Limited proteolysis of C1 inhibitor (C1-INH) by neutrophil elastase, Pseudomonas elastase and snake venoms resulted in initial cleavage within the molecule's N-terminus followed by further cleavage within the molecule's C-terminally placed reactive centre. N-Terminal proteolysis occurred at peptide bonds 14-15, 36-37 and 40-41. This had no effect on either the inhibitory activity or the heat-stability of C1-INH. Proteolysis within the reactive centre occurred at peptide bonds 439-440, 440-441, 441-442 and 442-443. Cleavage at any one of these sites inactivated C1-INH and conferred enhanced heat-stability upon a previously heat-labile molecule. Released neutrophil proteinases also cleaved and inactivated C1-INH, suggesting that they may physiologically regulate C1-INH during inflammatory episodes.

1986 ◽  
Vol 234 (2) ◽  
pp. 429-434 ◽  
Author(s):  
G Salvesen ◽  
C Parkes ◽  
M Abrahamson ◽  
A Grubb ◽  
A J Barrett

We point out that human low-Mr kininogen contains three cystatin-like sequences, rather than two, as had previously been thought. The protein was purified by affinity chromatography on carboxymethyl-papain-Sepharose, and subjected to limited proteolysis by trypsin and chymotrypsin. Fragments were isolated, and three corresponding to the individual cystatin-like domains were identified. By comparison with the known amino acid sequence of the protein they were numbered 1 to 3 from the N-terminus. Domain 1 was not found to have any inhibitory activity for cysteine proteinases, which is consistent with the absence of residues that are highly conserved in inhibitors of the cystatin superfamily, and have previously been suggested to be essential for activity. Domain 2 was a good inhibitor of chicken calpain, and also papain and cathepsin L. Domain 3 showed negligible inhibition of calpain, but inhibited papain and cathepsin L strongly. The probable arrangement of disulphide bonds in the heavy chain of low-Mr kininogen is deduced from the homology with the cystatins and other evidence contained in the present paper.


1999 ◽  
Vol 64 (8) ◽  
pp. 1211-1252 ◽  
Author(s):  
Jan Hlaváček ◽  
Renáta Marcová

The first part of this review deals with the biosynthesis and a biological function of strongly vasoactive peptides named endothelins (ETs) including vasoactive intestinal contractor. Where it was useful, snake venoms sarafotoxins which are structural endothelin derivatives, were also mentioned. In the second part, an attention is paid to structural basis of the ETs biological activity, with respect to alterations of amino acid residues in the parent peptides modifying the conformation and consequently the physico-chemical and biological properties in corresponding ETs analogs. Special attention is focussed on the area of ETs receptors and their interaction with peptide and non peptide agonists and antagonists, important in designing selective inhibitors of ETs receptors potentially applicable as drugs in a medicine. A review with 182 references.


2004 ◽  
Vol 134 (1) ◽  
pp. 65-73 ◽  
Author(s):  
Fabiana Carvalho Morales ◽  
Daniel Rodrigues Furtado ◽  
Franklin David Rumjanek

Biochemistry ◽  
2006 ◽  
Vol 45 (30) ◽  
pp. 9023-9031 ◽  
Author(s):  
Clara E. Isaza ◽  
Radu Silaghi-Dumitrescu ◽  
Ramesh B. Iyer ◽  
Donald M. Kurtz, ◽  
Michael K. Chan

1976 ◽  
Vol 157 (3) ◽  
pp. 745-751 ◽  
Author(s):  
P Smirnoff ◽  
S Khalef ◽  
Y Birk ◽  
S W Applebaum

1. A trypsin and chymotrypsin inhibitor was isolated by extraction of chick-pea meal at pH8.3, followed by (NH4)2SO4 precipitation and successive column chromatography on CM-cellulose and calcium phosphate (hydroxyapatite). 2. The inhibitor was pure by polyacrylamide-gel and cellulose acetate electrophoresis and by isoelectric focusing in polyacrylamide gels. 3. The inhibitor had a molecular weight of approx. 10000 as determined by ultracentrifugation and by polyacrylamide-gel electrophoresis in the presence of sodium dodecyl sulphate. A molecular weight of 8300 was resolved from its amino acid composition. 4. The inhibitor formed complexes with trypsin and chymotrypsin at molar ratios of 1:1. 5. Limited proteolysis of the inhibitor with trypsin at pH3.75 resulted in hydrolysis of a single-Lys-X-bond and in consequent loss of 85% of the trypsin inhibitory activity and 60% of the chymotrypsin inhibitory activity. Limited proteolysis of the inhibitor with chymotrypsin at pH3.75 resulted in hydrolysis of a single-Tyr-X-bond and in consequent loss of 70% of the trypsin inhibitory activity and in complete loss of the chymotrypsin inhibitory activity. 6. Cleavage of the inhibitor with CNBr followed by pepsin and consequent separation of the products on a Bio Gel P-10 column, yielded two active fragments, A and B. Fragment A inhibited trypsin but not chymotrypsin, and fragment B inhibited chymotrypsin but not trypsin. The specific trypsin inhibitory activity, on a molar ratio, of fragment A was twice that of the native inhibitor, suggesting the unmasking of another trypsin inhibitory site as a result of the cleavage. On the other hand, the specific chymotrypsin inhibitory activity of fragment B was about one-half of that of the native inhibitor, indicating the occurrence of a possible conformational change.


1990 ◽  
Vol 272 (3) ◽  
pp. 677-682 ◽  
Author(s):  
M A Belozersky ◽  
Y E Dunaevsky ◽  
N E Voskoboynikova

A homogeneous preparation of metalloproteinase, purified 1000-fold, was obtained from buckwheat (Fagopyrum esculentum) seeds. The Mr of the enzyme, determined by SDS/PAGE, was 34,000 (it was 39,000 by gel chromatography). Its pH optimum was 8.0-8.2 with 13 S globulin, from buckwheat seeds, as substrate. Atomic-absorption spectroscopy revealed the presence of one Zn2+ ion per enzyme molecule. The enzyme was completely inhibited by EDTA (1 mM), zincone (1 mM) and 1, 10-phenanthroline (1 mM). The metalloproteinase performed limited proteolysis of the following seed storage proteins: 13 S globulin from buckwheat seeds and 11 S globulin from soybean (Glycine max) seeds. It hydrolysed three peptide bonds formed by the amino groups of Leu15, Tyr16 and Phe25 in the oxidized B-chain of insulin. In its main properties the enzyme is similar to metalloproteinases of animal and bacterial origin.


Blood ◽  
2013 ◽  
Vol 122 (21) ◽  
pp. 3562-3562
Author(s):  
Jeremy P Wood ◽  
Alan E. Mast

Abstract Background In addition to regulating the initiation of coagulation through inhibition of the tissue factor/factor VIIa complex, we have recently demonstrated a previously unrecognized anticoagulant function of TFPIα: inhibition of the prothrombinase complex (factor Xa (FXa), factor Va (FVa), Ca++, and phospholipids). No endogenous protein has previously been identified to inhibit prothrombinase under physiologically relevant conditions. The inhibition of prothrombinase is mediated by two specific binding events: (1) binding of TFPI’s second Kunitz domain to the FXa active site; and (2) an essential high–affinity exosite interaction between the TFPIα C-terminus and an acidic region within the factor V B-domain, retained in forms of FVa present in platelet alpha granules or generated through limited proteolysis with FXa. The TFPIα C-terminus contains a basic region (LIKTKRKRK) nearly identical to one found in the FV B-domain (LIKTRKKKK). Both of these sequences are highly conserved across mammalian species, suggesting they have an important physiological function. The basic residues of these sequences are necessary for the charge-based interaction with the FVa B-domain acidic region. We sought to determine the function of the absolutely conserved L, I, and T residues of this sequence. Methods Seven peptides containing different changes in the LIKT portion of the sequence, as shown below, were synthesized and tested in thrombin generation assays using forms of Factor Va containing (FVaAR) or lacking (FVaIIa) the acidic region of the B-domain. Results The wild type peptide (LIKTKRKRKK) inhibited FVaAR prothrombinase (IC50 = 1.03 µM) but did not inhibit FVaIIa prothrombinase at concentrations up to 225 µM, confirming that inhibition requires the presence of the B-domain acidic region. Substitution of LIKT with AAAA (AAAAKRKRKK) essentially abolished inhibitory activity with only ∼20% inhibition observed at 350 µM peptide, as did substitution of the L, I, and T (AAKAKRKRKK), demonstrating that the positively charged K and R residues alone do not mediate the inhibitory activity. Individual Ala substitutions of the L, I, and T residues resulted in decreased, but measurable, inhibitory function (IC50= 70.2 µM, 16.7 µM, and 107 µM, respectively). Finally, the peptide LIETKRKRKK was made to assess the effect of a K254E mutation, which has been identified in the NHLBI Exome Sequencing Project. This also essentially abolished inhibitory activity with only 20% inhibition observed in the presence of 340 µM peptide. Conclusions TFPIα inhibits thrombin generation by prothrombinase assembled with forms of FVa that retain the acidic region of the B-domain, which serves as a key exosite, binding the TFPIα basic C-terminus in a charge-dependent manner. The peptide studies presented here demonstrate that the hydrophobic residues L, I, and T are also absolutely essential for exosite binding and inhibition of thrombin generation. In addition, a natural mutation in the LIKT sequence (LIET) results in complete loss of prothrombinase inhibition, and therefore may represent a previously unrecognized prothrombotic risk factor. Thus, the regulation of coagulation occurring through TFPIα-mediated inhibition of prothrombinase appears to be relevant during normal hemostasis, as well as under pathologic conditions. Disclosures: Mast: Novo Nordisk: Honoraria, Research Funding.


2005 ◽  
Vol 33 (2) ◽  
pp. 321-330 ◽  
Author(s):  
D.A. Lomas ◽  
D. Belorgey ◽  
M. Mallya ◽  
E. Miranda ◽  
K.J. Kinghorn ◽  
...  

Members of the serine proteinase inhibitor or serpin superfamily inhibit their target proteinases by a remarkable conformational transition that involves the enzyme being translocated more than 70 Å (1 Å=10−10 m) from the upper to the lower pole of the inhibitor. This elegant mechanism is subverted by point mutations to form ordered polymers that are retained within the endoplasmic reticulum of secretory cells. The accumulation of polymers underlies the retention of mutants of α1-antitrypsin and neuroserpin within hepatocytes and neurons to cause cirrhosis and dementia respectively. The formation of polymers results in the failure to secrete mutants of other members of the serpin superfamily: antithrombin, C1 inhibitor and α1-antichymotrypsin, to cause a plasma deficiency that results in the clinical syndromes of thrombosis, angio-oedema and emphysema respectively. Understanding the common mechanism underlying the retention and deficiency of mutants of the serpins has allowed us to group these conditions as the serpinopathies. We review in this paper the molecular and structural basis of the serpinopathies and show how this has allowed the development of specific agents to block the polymerization that underlies disease.


2004 ◽  
Vol 384 (2) ◽  
pp. 201-232 ◽  
Author(s):  
Pablo FUENTES-PRIOR ◽  
Guy S. SALVESEN

The death morphology commonly known as apoptosis results from a post-translational pathway driven largely by specific limited proteolysis. In the last decade the structural basis for apoptosis regulation has moved from nothing to ‘quite good’, and we now know the fundamental structures of examples from the initiator phase, the pre-mitochondrial regulator phase, the executioner phase, inhibitors and their antagonists, and even the structures of some substrates. The field is as well advanced as the best known of proteolytic pathways, the coagulation cascade. Fundamentally new mechanisms in protease regulation have been disclosed. Structural evidence suggests that caspases have an unusual catalytic mechanism, and that they are activated by apparently unrelated events, depending on which position in the apoptotic pathway they occupy. Some naturally occurring caspase inhibitors have adopted classic inhibition strategies, but other have revealed completely novel mechanisms. All of the structural and mechanistic information can, and is, being applied to drive therapeutic strategies to combat overactivation of apoptosis in degenerative disease, and underactivation in neoplasia. We present a comprehensive review of the caspases, their regulators and inhibitors from a structural and mechanistic point of view, and with an aim to consolidate the many threads that define the rapid growth of this field.


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