scholarly journals Peptide thioesters and 4-nitroanilides as substrates for porcine pancreatic kallikrein

1984 ◽  
Vol 220 (2) ◽  
pp. 569-573 ◽  
Author(s):  
J C Powers ◽  
B J McRae ◽  
T Tanaka ◽  
K Cho ◽  
R R Cook

A series of 14 4-nitroanilide substrates and 17 thioester substrates have been used to measure kinetic constants with porcine pancreatic kallikrein. All of the substrates have a P1 arginine residue. The 4-nitroanilide substrates consist of seven P2-glycine and seven P2-phenylalanine tripeptides. As expected from previous results, the phenylalanine series substrates were generally 100-fold ‘better’ than those in the glycine series. The S3 subsite was found to ‘prefer’ lysine or phenylalanine, whereas glutamic acid in this position was distinctly unfavourable. The thioester substrates consisted of various thioester derivatives of arginine as well as 12 dipeptides. These substrates exhibited kcat./Km values generally 1000 times higher than the P2-phenylalanine 4-nitroanilides. With the thioesters, a P2 phenylalanine or tryptophan residue yielded the best substrates, but some of the simple derivatives of arginine were nearly as good. A comparison of the kinetic constants of the thioester substrates between the porcine enzyme and human plasma kallikrein provides further evidence that these enzymes have a similar preference for bulky P2 residues, but otherwise are quite different enzymes. The thioester substrates are nearly as reactive as oxygen ester substrates such as acetylphenylalanylarginine methyl ester for the porcine enzyme [Levison & Tomalin (1982) Biochem. J. 203, 299-302; Fiedler (1983) Adv. Exp. Med. Biol. 156A, 263-274], and owing to the greater ease in assaying with the thioesters, they should find use in routine assays for the glandular kallikreins.

1982 ◽  
Vol 207 (1) ◽  
pp. 97-100 ◽  
Author(s):  
P R Levison ◽  
G Tomalin

Subsites in the S2-S4 region [Schechter & Berger (1967) Biochem. Biophys. Res. Commun. 27, 157-162] were identified in human plasma kallikrein II (EC 3.4.21.8). Kinetic constants (kcat, Km) were determined for a series of seven extended N-aminoacyl-L-arginine methyl esters based on the C-terminal sequence of bradykinin (-Pro-Phe-Arg) or (Gly)n-Arg. With these substrates it was found that deacylation of the enzyme was rate-limiting. It was possible to infer that L-proline at residue P3 interacted with subsite S3 of the enzyme and L-phenylalanine at residue P2 interacts hydrophobically with subsite S2 in addition to hydrogen-bonded interactions with this subsite region. By comparison with the results of a similar study with human plasma kallikrein I, it is observed that although broadly similar subsite interactions occur between the two enzyme forms, the rate of deacylation of kallikrein II is approx. 35% of that observed for kallikrein I, and the latter form is up to ten times more active (in terms of kcat./Km) than kallikrein II.


Biochemistry ◽  
1983 ◽  
Vol 22 (20) ◽  
pp. 4860-4866 ◽  
Author(s):  
Fedde Van der Graaf ◽  
Johannes A. Koedam ◽  
John H. Griffin ◽  
Bonno N. Bouma

2010 ◽  
Vol 37-38 ◽  
pp. 9-13
Author(s):  
Hong Xin Wang ◽  
Ning Dai

A non-iterative design method about high order intermittent mechanisms is presented. The mathematical principle is that a compound function produced by two basic functions, and then one to three order derivatives of the compound function are all zeroes when one order derivative of each basic function is zero at the same moment. The design method is that a combined mechanism is constructed by six bars; the displacement functions of the front four-bar and back four-bar mechanisms are separately built, let one order derivatives of two displacement functions separately be zero at the same moment, and then get geometrical relationships and solution on the intermittent mechanism. A design example shows that this method is simpler and transmission characteristics are better than optimization method.


1999 ◽  
Vol 43 (5) ◽  
pp. 1274-1276 ◽  
Author(s):  
Manhong Wu ◽  
Robert E. W. Hancock

ABSTRACT Both linear and cyclic derivatives of the cyclic 12-amino-acid antimicrobial peptide bactenecin were designed based on optimization of amphipathicity and charge location. In general, increasing the number of positive charges at the N and C termini and adding an extra tryptophan residue in the loop not only increased the activities against both gram-positive and gram-negative bacteria but also broadened the antimicrobial spectrum.


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