scholarly journals A thermal-variation method for analysing the rate constants of the Michaelis-Menten mechanism

1982 ◽  
Vol 207 (1) ◽  
pp. 179-181 ◽  
Author(s):  
S X Lin ◽  
K C Chou ◽  
J T F Wong
Keyword(s):  
Rate Constants ◽  
Variation Method ◽  
Thermal Variation ◽  
Kinetic Measurements ◽  
Saturation Velocity ◽  
Steady State Kinetic ◽  
Rate Effects ◽  
The One ◽  
State Kinetic

By analysing the variations of saturation velocity and Michaelis constant with temperature and invoking the mathematical constraint represented by the Arrhenius equation, it becomes possible to estimate k+2 and indistinguishably k+1 and k-1 for the Michaelis-Menten mechanism of one-substrate enzyme reactions. Distinction between k+1 and k-1 may be obtained through the determination of isotopic rate effects. This procedure thus provides a basis for evaluating all three rate constants of the one-substrate mechanism, and disproves the suggestion that k+1 and k-1 are intrinsically unobtainable from steady-state kinetic measurements.

Automated kinetic determination of lactate dehydrogenase isoenzymes in serum.

1977 ◽  
Vol 23 (10) ◽  
pp. 1928-1930 ◽  
Author(s):  
L H Bernstein
Keyword(s):  
Lactate Dehydrogenase ◽  
Kinetic Method ◽  
Previous Method ◽  
Kinetic Determination ◽  
Steady State Kinetic ◽  
Enzyme Subunits ◽  
Isoenzyme Composition ◽  
State Kinetic ◽  
Lactate Dehydrogenase Isoenzymes

Abstract A steady-state kinetic method has been revised for measuring lactate dehydrogenase isoenzyme activities, which relates the inhibition of heart-type isoenzyme activity to the overall isoenzyme composition of the enzyme subunits. The method depends on the pH-dependent formation of an inhibitory ternary complex by the heart-type isoenzyme with NAD+ and pyruvate (if the reaction is measured by NADH oxidation). A preincubation step in the previous method is eliminated. The isoenzymes are measured by measuring the reduction of pyruvate in two different concentrations, which favor either the total or fractional activity, depending on the concentrations of pyruvate and the percentage of heart-type subunits. The method has been adapted to a centrifugal analyzer, which has speeded automated isoenzyme determinations, with an accuracy comparable to that for electrophoretic methods.

scholarly journals Proton-linked l-rhamnose transport, and its comparison with l-fucose transport in Enterobacteriaceae

1993 ◽  
Vol 290 (3) ◽  
pp. 833-842 ◽  
Author(s):  
J A R Muiry ◽  
T C Gunn ◽  
T P McDonald ◽  
S A Bradley ◽  
C G Tate ◽  
...  
Keyword(s):  
Transport System ◽  
Erwinia Carotovora ◽  
Alkaline Ph ◽  
Transport Activity ◽  
Ph Change ◽  
Kinetic Measurements ◽  
E Coli ◽  
Steady State Kinetic ◽  
Competitive Inhibitors ◽  
State Kinetic

1. An alkaline pH change occurred when L-rhamnose, L-mannose or L-lyxose was added to L-rhamnose-grown energy-depleted suspensions of strains of Escherichia coli. This is diagnostic of sugar-H+ symport activity. 2. L-Rhamnose, L-mannose and L-lyxose were inducers of the sugar-H+ symport and of L-[14C]rhamnose transport activity. L-Rhamnose also induced the biochemically and genetically distinct L-fucose-H+ symport activity in strains competent for L-rhamnose metabolism. 3. Steady-state kinetic measurements showed that L-mannose and L-lyxose were competitive inhibitors (alternative substrates) for the L-rhamnose transport system, and that L-galactose and D-arabinose were competitive inhibitors (alternative substrates) for the L-fucose transport system. Additional measurements with other sugars of related structure defined the different substrate specificities of the two transport systems. 4. The relative rates of H+ symport and of sugar metabolism, and the relative values of their kinetic parameters, suggested that the physiological role of the transport activity was primarily for utilization of L-rhamnose, not for L-mannose or L-lyxose. 5. L-Rhamnose transport into subcellular vesicles of E. coli was dependent on respiration, was optimal at pH 7, and was inhibited by protonophores and ionophores. It was insensitive to N-ethylmaleimide or cytochalasin B. 6. L-Rhamnose, L-mannose and L-lyxose each elicited an alkaline pH change when added to energy-depleted suspensions of L-rhamnose-grown Salmonella typhimurium LT2, Klebsiella pneumoniae, Klebsiella aerogenes, Erwinia carotovora carotovora and Erwinia carotovora atroseptica. The relative rates of subsequent acidification varied, depending on both the organism and the sugar. L-Fucose promoted an alkaline pH change in all the L-rhamnose-induced organisms except the Erwinia species. No L-rhamnose-H+ symport occurred in any organism grown on L-fucose. 7. All these results showed that L-rhamnose transport into the micro-organisms occurred by a system different from that for L-fucose transport. Both systems are energized by the trans-membrane electrochemical gradient of protons. 8. Neither steady-state kinetic measurements nor binding-protein assays revealed the existence of a second L-rhamnose transport system in E. coli.

scholarly journals Dihydrolipoamide dehydrogenase from halophilic archaebacteria

1984 ◽  
Vol 218 (3) ◽  
pp. 811-818 ◽  
Author(s):  
M J Danson ◽  
R Eisenthal ◽  
S Hall ◽  
S R Kessell ◽  
D L Williams
Keyword(s):  
Steady State ◽  
Iodoacetic Acid ◽  
Enzymic Activity ◽  
Evolutionary Significance ◽  
Dihydrolipoamide Dehydrogenase ◽  
Kinetic Measurements ◽  
Steady State Kinetic ◽  
Halophilic Archaebacteria ◽  
Eukaryotic Organisms ◽  
State Kinetic

Dihydrolipoamide dehydrogenase has been discovered in the halophilic archaebacteria for the first time. The enzyme from both classical and alkaliphilic halobacteria has been investigated. (1) The enzyme specifically catalysed the stoichiometric oxidation of dihydrolipoamide by NAD+. Enzymic activity was optimal at 2 M-NaCl and was remarkably resistant to thermal denaturation. (2) The relative molecular masses (Mr) of the native enzyme from the various species of halobacteria were determined to be within the range 112000-120000. (3) The enzyme exhibited a hyperbolic dependence of catalytic activity on both dihydrolipoamide and NAD+ concentrations. From these steady-state kinetic measurements the dissociation constant (Ks) of dihydrolipoamide was determined to be 57 (+/- 5) microM. (4) The enzyme was only susceptible to inactivation by iodoacetic acid in the presence of its reducing ligands, dihydrolipoamide or NADH. The rate of inactivation followed a hyperbolic dependence on the concentration of dihydrolipoamide, from which the Ks of this substrate was calculated to be 55 (+/- 7) microM. Together with the steady-state kinetic data, the pattern of inactivations is consistent with the involvement in catalysis of a reversibly reducible disulphide bond, as has been found in dihydrolipoamide dehydrogenase from non-archaebacterial species. In eubacterial and eukaryotic organisms, dihydrolipoamide dehydrogenase functions in the 2-oxo acid dehydrogenase complexes. These multienzyme systems have not been detected in the archaebacteria, and, in the context of this apparent absence, the possible function and evolutionary significance of archaebacterial dihydrolipoamide dehydrogenase are discussed.

scholarly journals Interpretation of the Kinetics of Consecutive Enzyme-catalysed Reactions: Studies on the Arginase-Ornithine Carbamoyltransferase System

1982 ◽  
Vol 35 (2) ◽  
pp. 137 ◽  
Author(s):  
RD Teasdale ◽  
PD Jeffrey ◽  
PW Kuchel ◽  
LW Nichol
Keyword(s):  
Steady State ◽  
Ornithine Carbamoyltransferase ◽  
Enzyme Substrate ◽  
Steady State Kinetic ◽  
Kinetic Mechanisms ◽  
Heterogeneous Association ◽  
Kinetics Of ◽  
State Kinetic ◽  
Enzymic Assay

A method that permits the use of measurements on the concentration of the intermediate in a coupled enzymic assay in determining the presence or absence of an interaction between the enzymes is presented. The method is shown to be closely analogous to a previously formulated procedure involving the determination of the rate of production of the final product of such a sequence and is shown to be applicable regardless of the complexity of the operative kinetic mechanisms, provided it may be assumed that all enzyme-substrate complexes are in the steady-state. Kinetic results obtained with the arginase--ornithine carbamoyltransferase couple, in which the intermediate ornithine is monitored, are examined in these terms to conclude that no heterogeneous association is operative between the enzymes.

Detection and characterization of VIM-52, a new variant of VIM-1 from Klebsiella pneumoniae clinical isolate

2021 ◽  
Author(s):  
Marie de Barsy ◽  
Paola Sandra Mercuri ◽  
Saoussen Oueslati ◽  
Eddy Elisée ◽  
Te-Din Huang ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Substrate Specificity ◽  
Clinical Isolate ◽  
Targeted Mutagenesis ◽  
Kinetic Measurements ◽  
Steady State Kinetic ◽  
New Variant ◽  
State Kinetic ◽  
Global Health Problem

Over the last two decades, antimicrobial resistance has become a global health problem. In Gram-negative bacteria, metallo-β-lactamases (MBLs), which inactivate virtually all β-lactams, increasingly contribute to this phenomenon. The aim of this study is to characterize VIM-52, a His224Arg variant of VIM-1, identified in a Klebsiella pneumoniae clinical isolate. VIM-52 conferred lower MICs to cefepime and ceftazidime as compared to VIM-1. These results were confirmed by steady state kinetic measurements, where VIM-52 yielded a lower activity towards ceftazidime and cefepime but not against carbapenems. Residue 224 is part of the L10 loop (residues 221-241), which borders the active site. As Arg 224 and Ser 228 are both playing an important and interrelated role in enzymatic activity, stability and substrate specificity for the MBLs, targeted mutagenesis at both positions were performed and further confirmed their crucial role for substrate specificity.

scholarly journals Inhibition of dimeric dihydrodiol dehydrogenases of rabbit and pig lens by ascorbic acid

1991 ◽  
Vol 275 (1) ◽  
pp. 121-126 ◽  
Author(s):  
A Hara ◽  
M Shinoda ◽  
T Kanazu ◽  
T Nakayama ◽  
Y Deyashiki ◽  
...  
Keyword(s):  
Ascorbic Acid ◽  
Reverse Reaction ◽  
Ascorbate Oxidase ◽  
Binary Complex ◽  
Kinetic Measurements ◽  
Isoascorbic Acid ◽  
Dead End ◽  
Steady State Kinetic ◽  
Ic50 Values ◽  
State Kinetic

The dehydrogenase activity of dimeric dihydrodiol dehydrogenases (DD) purified from pig and rabbit lenses was inhibited by either L-ascorbic acid or its epimer, isoascorbic acid, at pH 7.5. Isoascorbate [IC50 (concn. giving 50% inhibition) = 0.043 mM for the pig enzyme; IC50 = 0.13 mM for the rabbit enzyme] was a more potent inhibitor than ascorbate (IC50 values 0.45 and 0.90 mM respectively), but 1 mM-dehydroascorbate gave less than 30% inhibition. Glucose, glucuronate, gulono-gamma-lactone, glutathione and dithiothreitol did not inhibit the enzyme activity. The inhibition by isoascorbate and ascorbate was instantaneous and reversible, and their inhibitory potency was decreased by addition of ascorbate oxidase. In the reverse reaction, isoascorbate and ascorbate gave low IC50 values of 0.013 and 0.10 mM respectively for the pig enzyme and 0.025 and 0.25 mM for the rabbit enzyme. The inhibition patterns by the two compounds were competitive with respect to dihydrodiols of naphthalene and benzene and uncompetitive with respect to NADP+, but those in the reverse reaction were uncompetitive with respect to both carbonyl substrate and NADPH. The steady-state kinetic measurements in the forward and reverse reactions by the pig enzyme were consistent with an ordered Bi Bi mechanism, in which NADP+ binds to the enzyme first and NADPH leaves last. The results indicate that ascorbate and its epimer directly bind to an enzyme: NADP+ binary complex as dead-end inhibitors. Thus ascorbate may be an important modulator of DD in the lens.

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