scholarly journals Detection of cytochrome b+50 in membranes of Rhodospirillum rubrum isolated from aerobically and phototrophically grown cells

1980 ◽  
Vol 186 (2) ◽  
pp. 453-459 ◽  
Author(s):  
R A Niederman ◽  
C N Hunter ◽  
D E Mallon ◽  
O T Jones
Keyword(s):  
Cytochrome B ◽  
Rhodospirillum Rubrum ◽  
Electron Flow ◽  
Computer Assisted ◽  
Difference Spectra ◽  
Reduction Potentials ◽  
Oxidation Reduction ◽  
Assisted Analysis ◽  
Electron Equivalent ◽  
Three Components

1. Dark equilibrium potentiometric titrations were conducted on membranes purified from Rhodospirillum rubrum in an effort to identify b-type cytochrome components reported in other Rhodospirillaceae. In preparations from aerobically grown cells virtually devoid of bacteriochlorophyll a, three components were observed at 560-540 nm. Their oxidation-reduction midpoint potentials assigned by computer-assisted analysis were +195, +50 and −110 mV at pH 7.0; each of these fitted closely to theoretical single-electron equivalent curves. 2. In chromatophores from phototrophically grown carotenoidless mutant G-9, three components were also observed with E0' +190, +50 and −90mV. 3. The alpha-band of the +50mV component exhibited an absorption maximum near 560nm in difference spectra obtained at fixed oxidation-reduction potentials. 4. This component could be demonstrated most readily in purified membrane preparations and may have been obscured in previous studies by residual cytochrome c'. 5. This is the first definitive report of cytochrome b+50 in membranes from Rs. rubrum and aligns this bacterium with other Rhodospirillaceae in which this component functions in light-driven cyclic electron flow.

scholarly journals Characterization and phenotypic control of the cytochrome content of Escherichia coli

1979 ◽  
Vol 182 (2) ◽  
pp. 465-472 ◽  
Author(s):  
Graeme A. Reid ◽  
W. John Ingledew
Keyword(s):  
Escherichia Coli ◽  
Electron Transport ◽  
Cytochrome B ◽  
Terminal Electron Acceptor ◽  
E Coli ◽  
Reduction Potentials ◽  
Electrode Potentials ◽  
Point Potential ◽  
Oxidation Reduction ◽  
Cytochrome D

1. Electron-transport particles derived from Escherichia coli grown aerobically contain three b-type cytochromes with mid-point oxidation–reduction potentials at pH7 of +260mV, +80mV and −50mV, with n=1 for each. The variation of these values with pH was determined. 2. E. coli develops a different set of b-type cytochromes when grown anaerobically on glycerol with fumarate or nitrate as terminal electron acceptor. Electron-transport particles of fumarate-grown cells contain b-type cytochromes with mid-point potentials at pH7 of +140mV and +250mV (n=1). These two cytochromes are also present in cells grown with nitrate as terminal acceptor, where an additional cytochrome b with a mid-point potential of +10mV (n=1) is developed. 3. The wavelengths of the α-absorption-band maxima of the b-type cytochromes at 77K were: (a) for aerobically grown cells, cytochrome b (Em7 +260mV), 556nm and 563nm, cytochrome b (Em7 +80mV), 556nm and cytochrome b (Em7−50mV), 558nm; (b) for anaerobically grown cells, cytochrome b (Em7 +250mV), 558nm, cytochrome b (Em7 +40mV), 555nm and cytochrome b (Em7 +10mV), 556nm. 4. Cytochrome d was found to have a mid-point potential at pH7 of +280mV (n=1). 5. Cytochrome a1 was resolved as two components of equal magnitude with mid-point potentials of +260mV and +160mV (n=1). 6. Redox titrations performed in the presence of CO showed that one of the b-type cytochromes in the aerobically grown cultures was reduced, even at the upper limits of our range of electrode potentials (above +400mV). Cytochrome d was also not oxidizable in the presence of CO. Neither of the cytochromes a1 was affected by the presence of CO.

Potentiometric and spectroscopic properties of the cytochrome o complex of Escherichia coli

1990 ◽  
Vol 68 (1) ◽  
pp. 83-90 ◽  
Author(s):  
H. Keith Withers ◽  
Philip D. Bragg
Keyword(s):  
Escherichia Coli ◽  
Absorption Maximum ◽  
Distinct Species ◽  
Spectroscopic Properties ◽  
Alpha Band ◽  
Difference Spectra ◽  
Midpoint Potential ◽  
Reduction Potentials ◽  
Cytochrome O ◽  
Oxidation Reduction

Cytochrome o purified from cell membranes of Escherichia coli shows two potentiometrically distinct species with midpoint oxidation–reduction potentials of + 265 ± 5 and + 140 ± 15 mV. The component with the higher potential reacted with carbon monoxide and so likely is the oxygen-reacting heme of the cytochrome o complex. It appears to be responsible for the absorption maximum at 564 nm in reduced minus oxidized difference spectra measured at 77 K. The midpoint potential of the other component was sensitive to oxidation by ferricyanide. This latter component had an absorption maximum at about 554 nm. The inhibitor 2-heptyl-4-hydroxyquinoline N-oxide inhibited reoxidation of reduced cytochrome o by oxygen and modified the spectroscopic behaviour of the 564 nm component. The ratio of the heights of the maxima in the alpha-band region of the absorption spectrum differed in cytochrome o prepared from cloned material from that found in cytochrome o from noncloned sources, in spite of the similar polypeptide compositions of the two preparations.Key words: cytochrome o, potentiometry, HOQNO (2-heptyl-4-hydroxyquinoline N-oxide), oxidase, respiratory chain.

Computer-Assisted Analysis of Multi-Color Confocal Microscopic Datasets: Automated Light Microscopic Discrimination of Synaptic Relationships

1996 ◽  
Vol 54 ◽  
pp. 284-285
Author(s):  
M Wessendorf ◽  
A Beuning ◽  
D Cameron ◽  
J Williams ◽  
C Knox
Keyword(s):  
Nerve Fibers ◽  
Confocal Scanning Laser Microscopy ◽  
Computer Assisted ◽  
Nerve Terminals ◽  
Neuronal Somata ◽  
Scanning Laser Microscopy ◽  
Confocal Scanning ◽  
Entire Cell ◽  
Confocal Scanning Laser ◽  
Assisted Analysis

Multi-color confocal scanning-laser microscopy (CSLM) allows examination of the relationships between neuronal somata and the nerve fibers surrounding them at sub-micron resolution in x,y, and z. Given these properties, it should be possible to use multi-color CSLM to identify relationships that might be synapses and eliminate those that are clearly too distant to be synapses. In previous studies of this type, pairs of images (e.g., red and green images for tissue stained with rhodamine and fluorescein) have been merged and examined for nerve terminals that appose a stained cell (see, for instance, Mason et al.). The above method suffers from two disadvantages, though. First, although it is possible to recognize appositions in which the varicosity abuts the cell in the x or y axes, it is more difficult to recognize them if the apposition is oriented at all in the z-axis—e.g., if the varicosity lies above or below the neuron rather than next to it. Second, using this method to identify potential appositions over an entire cell is time-consuming and tedious.

scholarly journals Studies on the Oxidation-Reduction Potentials of Heme Proteins

1965 ◽  
Vol 240 (8) ◽  
pp. 3317-3324
Author(s):  
Maurizio Brunori ◽  
Jeffries Wyman ◽  
Eraldo Antonini ◽  
Alessandro Rossi-Fanelli
Keyword(s):  
Heme Proteins ◽  
Reduction Potentials ◽  
Oxidation Reduction

scholarly journals SULFHYDRYL OXIDATION-REDUCTION POTENTIALS DERIVED FROM THERMAL DATA

1937 ◽  
Vol 117 (1) ◽  
pp. 281-308
Author(s):  
Henry Borsook ◽  
Emory L. Ellis ◽  
Hugh M. Huffman
Keyword(s):  
Reduction Potentials ◽  
Oxidation Reduction ◽  
Thermal Data ◽  
Sulfhydryl Oxidation

scholarly journals Syllabification of the Divine Comedy

2021 ◽  
Vol 14 (3) ◽  
pp. 1-26
Author(s):  
Andrea Asperti ◽  
Stefano Dal Bianco
Keyword(s):  
Text Processing ◽  
Solution Space ◽  
Generative Models ◽  
Divine Comedy ◽  
Point Of View ◽  
Computer Assisted ◽  
Wide Range ◽  
The Divine Comedy ◽  
Left And Right ◽  
Assisted Analysis

We provide a syllabification algorithm for the Divine Comedy using techniques from probabilistic and constraint programming. We particularly focus on the synalephe , addressed in terms of the "propensity" of a word to take part in a synalephe with adjacent words. We jointly provide an online vocabulary containing, for each word, information about its syllabification, the location of the tonic accent, and the aforementioned synalephe propensity, on the left and right sides. The algorithm is intrinsically nondeterministic, producing different possible syllabifications for each verse, with different likelihoods; metric constraints relative to accents on the 10th, 4th, and 6th syllables are used to further reduce the solution space. The most likely syllabification is hence returned as output. We believe that this work could be a major milestone for a lot of different investigations. From the point of view of digital humanities it opens new perspectives on computer-assisted analysis of digital sources, comprising automated detection of anomalous and problematic cases, metric clustering of verses and their categorization, or more foundational investigations addressing, e.g., the phonetic roles of consonants and vowels. From the point of view of text processing and deep learning, information about syllabification and the location of accents opens a wide range of exciting perspectives, from the possibility of automatic learning syllabification of words and verses to the improvement of generative models, aware of metric issues, and more respectful of the expected musicality.

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