scholarly journals Haemoglobin binding with haptoglobin. Unequivocal demonstration that the β-chains of human haemoglobin bind to haptoglobin

1980 ◽  
Vol 185 (1) ◽  
pp. 285-287 ◽  
Author(s):  
A L Kazim ◽  
M Z Atassi
Keyword(s):  
Solid Phase ◽  
Beta Chain ◽  
Human Haemoglobin ◽  
Alpha Chain ◽  
Highly Sensitive ◽  
Radiometric Assay

Haptoglobin binding to haemoglobin and its isolated alpha- and beta-chains was studied by use of a highly sensitive solid-phase radiometric assay. As expected, adsorbents of haemoglobin bound 125I-labelled haptoglobin more efficiently than did adsorbents of the alpha-chain. However, unexpectedly, adsorbents of the beta-chain were found to be essentially identical with those of the alpha-chain in their ability to bind haptoglobin. These results demonstrate, unequivocally, the ability of beta-chains to bind to haptoglobin, and indicate that this assay is particularly convenient and useful for studying haptoglobin interactions with haemoglobin and its alpha- and beta-chains.

scholarly journals Subunit interacting surfaces of human haemoglobin. Localization of the α-subunit-β-subunit interacting surfaces on the β-chain by a comprehensive synthetic strategy

1986 ◽  
Vol 234 (2) ◽  
pp. 457-461 ◽  
Author(s):  
N Yoshioka ◽  
M Z Atassi
Keyword(s):  
Binding Capacity ◽  
Binding Activity ◽  
The Other ◽  
Synthetic Approach ◽  
Beta Chain ◽  
Human Haemoglobin ◽  
Α Subunit ◽  
Alpha Chain ◽  
Synthetic Strategy ◽  
Interacting Surfaces

A synthetic approach is introduced for localization of subunit interacting surfaces in oligomeric proteins. It consists of studying the binding activity of consecutive uniform overlapping peptides encompassing an entire subunit to the other, radiolabelled, subunit. This permits the establishment of the full profile of peptides that bind the other intact subunit. This approach has been demonstrated with haemoglobin, and its application here with the beta-chain peptides has enabled the localization on the beta-chain of the submolecular regions responsible for its binding to alpha-chain in solution. There was good agreement between the binding surfaces found here in solution and those expected from the crystal structure. There were also, however, some significant differences in the levels of binding found in solution and those expected from the crystal. Peptide 21-35 possessed much higher binding activity than would be expected from its contribution to subunit association in the crystal. Conversely, other regions expected to possess considerable binding capacity for alpha-chain either showed low (peptides 111-125 and 121-135) or almost no binding (peptides 91-105 and 101-115) capacity. On the other hand, two interacting surfaces (within peptides 11-25 and 71-85) that make a contribution in solution do not appear to play a role in the crystal. It is concluded that the regions of subunit association in solution are close to, but not identical with, those in the crystal. The approach should serve as an effective method for localization of subunit interacting surfaces of unknown proteins, even those that can be isolated only in traces.

scholarly journals Haemoglobin binding with haptoglobin. Localization of the haptoglobin-binding sites on the β-chain of human haemoglobin by synthetic overlapping peptides encompassing the entire chain

1986 ◽  
Vol 234 (2) ◽  
pp. 453-456 ◽  
Author(s):  
N Yoshioka ◽  
M Z Atassi
Keyword(s):  
Binding Sites ◽  
Solid Phase ◽  
Three Dimensional ◽  
Binding Activity ◽  
Dimensional Structure ◽  
Synthetic Approach ◽  
Protein Chain ◽  
Beta Chain ◽  
Human Haemoglobin ◽  
Β Chain

A synthetic approach was employed to identify the haptoglobin-binding sites on the beta-chain of human haemoglobin. This approach consists of the synthesis of a series of consecutive overlapping peptides that, together, systematically represent the entire protein chain. Fourteen synthetic peptides (beta 1-15, beta 11-25 etc.) were examined for their ability to bind human haptoglobin by quantitative solid-phase radiometric titrations of 125I-labelled haptoglobin. Of these 14 peptides only peptides beta 11-25 and beta 131-146 bound haptoglobin significantly; peptide beta 21-35 exhibited a small binding activity as a consequence of the overlap with peptide beta 11-25. On this basis and by examination of the three-dimensional structure of haemoglobin, it was concluded that the beta-chain of haemoglobin has two binding sites for haptoglobin that reside in, but do not necessarily encompass all of, the regions beta 11-25 and beta 131-146.

scholarly journals A critical cytoplasmic domain of the interleukin-5 (IL-5) receptor alpha chain and its function in IL-5-mediated growth signal transduction.

1994 ◽  
Vol 14 (11) ◽  
pp. 7404-7413 ◽  
Author(s):  
S Takaki ◽  
H Kanazawa ◽  
M Shiiba ◽  
K Takatsu
Keyword(s):  
Signal Transduction ◽  
Protein Tyrosine Kinase ◽  
Cytoplasmic Domain ◽  
Beta Chain ◽  
Cytoplasmic Domains ◽  
Interleukin 5 ◽  
Alpha Chain ◽  
Gm Csf ◽  
Response Expression ◽  
And Function

Interleukin-5 (IL-5) regulates the production and function of B cells, eosinophils, and basophils. The IL-5 receptor (IL-5R) consists of two distinct membrane proteins, alpha and beta. The alpha chain (IL-5R alpha) is specific to IL-5. The beta chain is the common beta chain (beta c) of receptors for IL-3 and granulocyte-macrophage colony-stimulating factor (GM-CSF). The cytoplasmic domains of both alpha and beta chains are essential for signal transduction. In this study, we generated cDNAs of IL-5R alpha having various mutations in their cytoplasmic domains and examined the function of these mutants by expressing them in IL-3-dependent FDC-P1 cells. The membrane-proximal proline-rich sequence of the cytoplasmic domain of IL-5R alpha, which is conserved among the alpha chains of IL-5R, IL-3R, and GM-CSF receptor (GM-CSFR), was found to be essential for the IL-5-induced proliferative response, expression of nuclear proto-oncogenes such as c-jun, c-fos, and c-myc, and tyrosine phosphorylation of cellular proteins including JAK2 protein-tyrosine kinase. In addition, analysis using chimeric receptors which consist of the extracellular domain of IL-5R alpha and the cytoplasmic domain of beta c suggested that dimerization of the cytoplasmic domain of beta c may be an important step in activating the IL-5R complex and transducing intracellular growth signals.

Highly Sensitive Visual Fluorometry of Aluminium at ppb Level with Ring-like Solid Phase of Poly(vinyl alcohol)

1999 ◽  
Vol 28 (3) ◽  
pp. 217-218 ◽  
Author(s):  
Akihiko Ishida ◽  
Emiko Kaneko ◽  
Takao Yotsuyanagi
Keyword(s):  
Vinyl Alcohol ◽  
Solid Phase ◽  
Poly Vinyl Alcohol ◽  
Highly Sensitive

scholarly journals Highly sensitive non-enzymatic hydrogen peroxide monitoring platform based on nanoporous gold via a modified solid-phase reaction method

RSC Advances ◽  
2021 ◽  
Vol 11 (58) ◽  
pp. 36753-36759
Author(s):  
Zhipeng Yang ◽  
Jun Li ◽  
Panmei Liu ◽  
An Zhang ◽  
Jing Wang ◽  
...  
Keyword(s):  
Hydrogen Peroxide ◽  
Solid Phase ◽  
Nanoporous Gold ◽  
Solid Phase Reaction ◽  
Selective Detection ◽  
Phase Reaction ◽  
Reaction Method ◽  
Grain Sizes ◽  
Highly Sensitive ◽  
Monitoring Platform

Ge/Au/Ge triple-layered precursor was proposed to prepare nanoporous gold (NPG) with much smaller grain sizes and nanopores as an electrochemical sensor for highly sensitive and selective detection of hydrogen peroxide.

scholarly journals Contribution of T Cell Receptor Alpha and Beta CDR3, MHC Typing, V and J Genes to Peptide Binding Prediction

2021 ◽  
Vol 12 ◽  
Author(s):  
Ido Springer ◽  
Nili Tickotsky ◽  
Yoram Louzoun
Keyword(s):  
T Cell ◽  
T Cell Receptor ◽  
Language Processing ◽  
Peptide Binding ◽  
Cell Receptor ◽  
Main Element ◽  
Beta Chain ◽  
Binding Prediction ◽  
Alpha Chain ◽  
Peptide Binding Prediction

IntroductionPredicting the binding specificity of T Cell Receptors (TCR) to MHC-peptide complexes (pMHCs) is essential for the development of repertoire-based biomarkers. This affinity may be affected by different components of the TCR, the peptide, and the MHC allele. Historically, the main element used in TCR-peptide binding prediction was the Complementarity Determining Region 3 (CDR3) of the beta chain. However, recently the contribution of other components, such as the alpha chain and the other V gene CDRs has been suggested. We use a highly accurate novel deep learning-based TCR-peptide binding predictor to assess the contribution of each component to the binding.MethodsWe have previously developed ERGO-I (pEptide tcR matchinG predictiOn), a sequence-based T-cell receptor (TCR)-peptide binding predictor that employs natural language processing (NLP) -based methods. We improved it to create ERGO-II by adding the CDR3 alpha segment, the MHC typing, V and J genes, and T cell type (CD4+ or CD8+) as to the predictor. We then estimate the contribution of each component to the prediction.Results and DiscussionERGO-II provides for the first time high accuracy prediction of TCR-peptide for previously unseen peptides. For most tested peptides and all measures of binding prediction accuracy, the main contribution was from the beta chain CDR3 sequence, followed by the beta chain V and J and the alpha chain, in that order. The MHC allele was the least contributing component. ERGO-II is accessible as a webserver at http://tcr2.cs.biu.ac.il/ and as a standalone code at https://github.com/IdoSpringer/ERGO-II.

scholarly journals Antigenic structure of human haemoglobin. Localization of the antigenic sites of the β-chain in three host species by synthetic overlapping peptides representing the entire chain

1986 ◽  
Vol 234 (2) ◽  
pp. 441-447 ◽  
Author(s):  
N Yoshioka ◽  
M Z Atassi
Keyword(s):  
Host Species ◽  
Structural Characteristics ◽  
Three Dimensional ◽  
Antigenic Structure ◽  
Synthetic Approach ◽  
Immune Recognition ◽  
Beta Chain ◽  
Human Haemoglobin ◽  
Antigenic Sites ◽  
Full Profile

A comprehensive synthetic approach is applied here to localize the continuous antigenic sites of the beta-chain of haemoglobin. The approach was based on the synthesis and purification of the following consecutive 15-residue peptides (each overlapping by five residues at both ends with the peptides preceding it and following it in the sequence): 1-15, 11-25 etc. Quantitative radiometric titrations of protein and peptide adsorbents were performed with 125I-labelled anti-haemoglobin antibodies from three different host species. The specificity of antibody binding to peptide adsorbents was confirmed by inhibition studies and by the binding specificity of antibodies isolated from peptide adsorbents. These studies established the full profile of antigenic beta-chain regions, which was found to be independent of the host species. Five major antigenic sites were localized, and their three-dimensional and structural characteristics are discussed in relation to the immune recognition of haemoglobin and other proteins.

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