scholarly journals Evidence for the lack of deoxyribonucleic acid dark-repair in Halobacterium cutirubrum

1976 ◽  
Vol 156 (3) ◽  
pp. 569-575 ◽  
Author(s):  
V L Grey ◽  
P S Fitt
Keyword(s):  
Dna Replication ◽  
Dna Synthesis ◽  
Deoxyribonucleic Acid ◽  
Normal Growth ◽  
Dark Repair ◽  
Hybrid Dna

1. Halobacterium cutirubrum does not perform dark-repair of DNA either after u.v. irradiation or during normal growth. 2. Cultures irradiated with u.v. are readily photoreactivated, but do not recover viability in the dark. 3. No increase in the rate of DNA synthesis is observed in the surviving cells after u.v. irradiation. 4. At early times during normal semiconservative replication, newly incorporated thymidine is found only in the hybrid DNA. 5. It is suggested that these bacteria may be useful in the study of DNA replication and photoreactivation.

scholarly journals The occurrence of two types of synthesis of deoxyribonucleic acid during normal growth in Bacillus subtilis

1973 ◽  
Vol 135 (2) ◽  
pp. 315-325 ◽  
Author(s):  
William J. Harris
Keyword(s):  
Bacillus Subtilis ◽  
Dna Synthesis ◽  
Deoxyribonucleic Acid ◽  
Normal Growth ◽  
Selective Inhibition ◽  
Repair Synthesis ◽  
Preferential Utilization ◽  
Uracil Repair ◽  
Relative Utilization

A study of the relative utilization of thymine and thymidine as precursors for DNA synthesis during normal growth in Bacillus subtilis showed that thymine serves preferentially as a precursor for ‘repair’ synthesis, whereas thymidine is used preferentially for ‘replicative’ synthesis. Further, evidence was obtained which suggests that during normal growth both ‘replicative’ and ‘repair’ DNA syntheses occur simultaneously. ‘Repair’ synthesis is distinguished not only on the basis of its preferential utilization of thymine but also by its selective inhibition by caffeine. ‘Replicative’ synthesis, however, is selectively inhibited by 6-(p-hydroxyphenylazo)-uracil. ‘Repair’ synthesis would seem to be a ‘pre-fork’ phenomenon and its inhibition is highly lethal to the cell.

Ultraviolet radiation studies on the colonial alga, Eudorina elegans

1971 ◽  
Vol 17 (11) ◽  
pp. 1417-1424 ◽  
Author(s):  
C. L. Kemp ◽  
J. W. Wentworth
Keyword(s):  
Ultraviolet Radiation ◽  
Visible Light ◽  
Dna Synthesis ◽  
Ultraviolet Irradiation ◽  
Half Life ◽  
Deoxyribonucleic Acid ◽  
Multicellular Organism ◽  
Dark Repair ◽  
Complete Reversal ◽  
Survival Patterns

Eudorina elegans was used to examine the response of an easily manipulated, multicellular organism to ultraviolet irradiation. The results indicate that E. elegans possesses an efficient photoreversal process. It is capable of complete reversal of ultraviolet induced damage sufficient to inactivate 99.99% of the colony-forming ability of the organism. Eudorina loses the ability to respond to visible light reversal of ultraviolet-induced damage exponentially with time. The half-life of this loss is about 10 h at 32° and about 20 h at 22°. Postultraviolet temperature of incubation influences the surviving fraction with fewer survivors at 22° than at 32°. The survival patterns of E. elegans suggest that a specific dark repair of ultraviolet-induced lesions may not occur, but that some repair processes take place during cellular deoxyribonucleic acid (DNA) synthesis.

scholarly journals THE EFFECT OF 5-BROMODEOXYURIDINE ON DNA REPLICATION AND CELL DIVISION IN TETRAHYMENA PYRIFORMIS

1974 ◽  
Vol 62 (2) ◽  
pp. 316-321 ◽  
Author(s):  
Anne E. Lykkesfeldt ◽  
H. A. Andersen
Keyword(s):  
Cell Division ◽  
Structural Change ◽  
Dna Replication ◽  
First Generation ◽  
Normal Growth ◽  
Tetrahymena Pyriformis ◽  
Defined Medium ◽  
Chemically Defined Medium ◽  
Normal Hybrid ◽  
Hybrid Dna

Populations of Tetrahymena pyriformis were grown in a chemically defined medium containing the thymidine analogue 5-bromodeoxyuridine (BUdR). About 65% of the thymidine sites in DNA were substituted by BUdR. During the first generation in the presence of BUdR, all DNA became hybrid. After the following cell division, in about 80% of the cells the second DNA replication round was initiated but no further cell division took place. The cells could be rescued by removing BUdR and adding thymidine. New replication took place before the first cell division. However, although the cells contained double heavy as well as hybrid DNA, only the hybrid DNA was replicated. After a full replication of the hybrid DNA, normal growth was restored. Melting profiles of normal, hybrid, and double heavy DNA indicated a structural change of the double heavy DNA.

scholarly journals Histone H3 Lysine 4 Methylation Marks Postreplicative Human Cytomegalovirus Chromatin

2012 ◽  
Vol 86 (18) ◽  
pp. 9817-9827 ◽  
Author(s):  
Alexandra Nitzsche ◽  
Charlotte Steinhäußer ◽  
Katrin Mücke ◽  
Christina Paulus ◽  
Michael Nevels
Keyword(s):  
Dna Replication ◽  
Dna Synthesis ◽  
Histone Modification ◽  
Dna Polymerase ◽  
Human Cytomegalovirus ◽  
Viral Genome ◽  
Histone H3 ◽  
Viral Dna ◽  
The Impact ◽  
Preferential Incorporation

In the nuclei of permissive cells, human cytomegalovirus genomes form nucleosomal structures initially resembling heterochromatin but gradually switching to a euchromatin-like state. This switch is characterized by a decrease in histone H3 K9 methylation and a marked increase in H3 tail acetylation and H3 K4 methylation across the viral genome. We used ganciclovir and a mutant virus encoding a reversibly destabilized DNA polymerase to examine the impact of DNA replication on histone modification dynamics at the viral chromatin. The changes in H3 tail acetylation and H3 K9 methylation proceeded in a DNA replication-independent fashion. In contrast, the increase in H3 K4 methylation proved to depend widely on viral DNA synthesis. Consistently, labeling of nascent DNA using “click chemistry” revealed preferential incorporation of methylated H3 K4 into viral (but not cellular) chromatin during or following DNA replication. This study demonstrates largely selective epigenetic tagging of postreplicative human cytomegalovirus chromatin.

Induction of DNA replication in germinal vesicles and in nuclei formed in maturing mouse oocytes by 6-DMAP treatment

Zygote ◽  
1997 ◽  
Vol 5 (3) ◽  
pp. 213-217 ◽  
Author(s):  
J. Fulka ◽  
N.L. First ◽  
C. Lee ◽  
J. Fulka ◽  
R.M. Moor
Keyword(s):  
Dna Replication ◽  
Dna Synthesis ◽  
Germinal Vesicle ◽  
The Other ◽  
Immature Oocytes ◽  
Mouse Oocytes ◽  
Germinal Vesicles ◽  
Immature Mouse ◽  
Condensed Dna ◽  
Metaphase Ii Oocytes

SummaryImmature mouse oocytes (germinal vesicle stage, GV), oocytes at different stages during maturation (prometaphase to anaphase I) and matured oocytes (metaphase II arrested) were cultured in 6-dimethylaminopurine (6-DMAP)-supplemented medium also containing bromodeoxyuridine for the assessment of DNA replication in these cells. Immature oocytes remained arrested at the GV stage and DNA replication was never detected in them. On the other hand, oocytes at the prometaphase to anaphase-telophase I stages responded to 6-DMAP treatment by forming nuclei which synthesised DNA. Mature (metaphase II) oocytes did not respond to 6-DMAP and their chromatin remained condensed. DNA synthesis could even be induced in GV-staged oocytes, but only when they were fused to freshly activated oocytes and incubated in 6-DMAP-supplemented medium.

A Requirement for Recombinational Repair in Saccharomyces cerevisiae Is Caused by DNA Replication Defects of mec1 Mutants

Genetics ◽  
1999 ◽  
Vol 153 (2) ◽  
pp. 595-605 ◽  
Author(s):  
Bradley J Merrill ◽  
Connie Holm
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Replication ◽  
Dna Synthesis ◽  
Synthetic Lethality ◽  
Velocity Sedimentation ◽  
Recombinational Repair ◽  
Repair Pathway ◽  
Dna Breaks ◽  
Single Stranded Dna ◽  
Double Stranded Dna

Abstract To examine the role of the RAD52 recombinational repair pathway in compensating for DNA replication defects in Saccharomyces cerevisiae, we performed a genetic screen to identify mutants that require Rad52p for viability. We isolated 10 mec1 mutations that display synthetic lethality with rad52. These mutations (designated mec1-srf for synthetic lethality with rad-fifty-two) simultaneously cause two types of phenotypes: defects in the checkpoint function of Mec1p and defects in the essential function of Mec1p. Velocity sedimentation in alkaline sucrose gradients revealed that mec1-srf mutants accumulate small single-stranded DNA synthesis intermediates, suggesting that Mec1p is required for the normal progression of DNA synthesis. sml1 suppressor mutations suppress both the accumulation of DNA synthesis intermediates and the requirement for Rad52p in mec1-srf mutants, but they do not suppress the checkpoint defect in mec1-srf mutants. Thus, it appears to be the DNA replication defects in mec1-srf mutants that cause the requirement for Rad52p. By using hydroxyurea to introduce similar DNA replication defects, we found that single-stranded DNA breaks frequently lead to double-stranded DNA breaks that are not rapidly repaired in rad52 mutants. Taken together, these data suggest that the RAD52 recombinational repair pathway is required to prevent or repair double-stranded DNA breaks caused by defective DNA replication in mec1-srf mutants.

scholarly journals Involvement of deoxyribonucleic acid polymerase β in nuclear deoxyribonucleic acid synthesis

1978 ◽  
Vol 173 (1) ◽  
pp. 309-314 ◽  
Author(s):  
T R Butt ◽  
W M Wood ◽  
E L McKay ◽  
R L P Adams
Keyword(s):  
Dna Synthesis ◽  
Dna Polymerase ◽  
Deoxyribonucleic Acid ◽  
Nuclear Dna ◽  
Dna Polymerase Beta ◽  
Cell Nuclei ◽  
High Molecular Weight Dna ◽  
Dna Polymerase Alpha ◽  
Polymerase Beta

The effects on DNA synthesis in vitro in mouse L929-cell nuclei of differential extraction of DNA polymerases alpha and beta were studied. Removal of all measurable DNA polymerase alpha and 20% of DNA polymerase beta leads to a 40% fall in the replicative DNA synthesis. Removal of 70% of DNA polymerase beta inhibits replicative synthesis by 80%. In all cases the nuclear DNA synthesis is sensitive to N-ethylmaleimide and aCTP (arabinosylcytosine triphosphate), though less so than DNA polymerase alpha. Addition of deoxyribonuclease I to the nuclear incubation leads to synthesis of high-molecular-weight DNA in a repair reaction. This occurs equally in nuclei from non-growing or S-phase cells. The former nuclei lack DNA polymerase alpha and the reaction reflects the sensitivity of DNA polymerase beta to inhibiton by N-ethylmaleimide and aCTP.

DEOXYCYTIDYLATE DEAMINASE LEVELS IN REGENERATING RAT LIVER

1961 ◽  
Vol 39 (6) ◽  
pp. 1043-1054 ◽  
Author(s):  
D. K. Myers ◽  
C. Anne Hemphill ◽  
Constance M. Townsend
Keyword(s):  
Dna Synthesis ◽  
Liver Regeneration ◽  
Partial Hepatectomy ◽  
Rat Liver ◽  
Deoxyribonucleic Acid ◽  
Regenerating Liver ◽  
Regenerating Rat Liver ◽  
High Level ◽  
Early Regeneration

Deoxycytidylate deaminase activity and net synthesis of deoxyribonucleic acid (DNA) in vivo were found to increase at approximately the same time during the early stages of liver regeneration. However, deaminase activity in the regenerating liver remained at a high level for 1 day after DNA synthesis had slowed down again during the later stages of regeneration. The increase in deaminase activity was restricted as a result of exposure to 600 r X radiation during early regeneration, but this effect only became evident 11–16 hours after the irradiation. Irradiation on the second day after partial hepatectomy, when deaminase levels in control regenerating livers were relatively constant, failed to affect the deaminase activity immediately but did produce a 40–50% decrease in activity 11–16 hours later. Other antimitotic agents, e.g., colchicine, had little effect on deaminase activity.

IN VIVO SYNTHESIS AND BREAKDOWN OF DEOXYRIBONUCLEIC ACID IN TRIBOLIUM CONFUSUM DUVAL

1966 ◽  
Vol 44 (12) ◽  
pp. 1571-1575 ◽  
Author(s):  
K. D. Chaudhary ◽  
A. Lemonde
Keyword(s):  
Dna Synthesis ◽  
Growth Phase ◽  
Deoxyribonucleic Acid ◽  
Total Concentration ◽  
Larval Growth ◽  
Pupal Stage ◽  
Larval Period ◽  
Tribolium Confusum ◽  
In Vivo Synthesis

The in vivo synthesis of deoxyribonucleic acid (DNA), as shown by the rate of incorporation of14C-thymidine, has been investigated at different stages in the life cycle of Tribolium confusum. During the larval period, a close similarity is observed between the rate of DNA synthesis and the pattern of growth. The pupal stage, which is a non-growth phase, is characterized by a cessation of DNA synthesis. During the larval growth phase, although the 3-day-old larvae have the lowest and the 13-day-old have the highest rate of DNA synthesis, the rate of DNA degradation in the older larvae is almost twice as great as that of the younger larvae. These findings are consistent with the observed total concentration of DNA of the insect at these stages.

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