scholarly journals The number of catalytic sites in acetylcholinesterase

1971 ◽  
Vol 123 (2) ◽  
pp. 139-141 ◽  
Author(s):  
W. Leuzinger
Keyword(s):  
Molecular Weight ◽  
Direct Measurement ◽  
Active Site ◽  
Active Sites ◽  
Native Enzyme ◽  
Equivalent Weight ◽  
Irreversible Inhibitor ◽  
Catalytic Sites

By using two methods of titration, the number of active sites in acetylcholinesterase was determined. Either stepwise inhibition of the enzyme by an irreversible inhibitor, namely di-isopropyl phosphorofluoridate, or direct measurement of the concentration of active sites by titration with o-nitrophenyl dimethylcarbamate yielded an equivalent weight of approx. 130000 for an active site in acetylcholinesterase. This indicates two sites per molecule, since the native enzyme has a molecular weight of 260000.

scholarly journals Multiplicity of Active-Site in Heterogeneous Ziegler-Natta Catalyst and Its Correlation with Polymer Microstructure

1970 ◽  
Vol 46 (4) ◽  
pp. 487-494
Author(s):  
ATM Kamrul Hasan
Keyword(s):  
Molecular Weight ◽  
Computer Simulation ◽  
Active Site ◽  
Photoelectron Spectroscopy ◽  
Active Sites ◽  
Chain Structure ◽  
Surface Complexes ◽  
Polymer Microstructure ◽  
Natta Catalyst ◽  
Ziegler Natta Catalyst

Multiplicity of active-site in heterogeneous Ziegler-Natta catalysts and its correlation with polymer microstructure was studied through the surface structure analysis of catalyst by computer simulation of X-ray Photoelectron Spectroscopy (XPS) data and microstructure investigation of polypropylene chains based on the deconvolution of the molecular weight distribution curves by multiple Flory most probable distributions using Gel Permeation Chromatography (GPC) method. The number and relative intensities of these peaks were found correlated to the distribution of multiple active sites. In this investigation, four individual categories of active sites were identified, each of which yields polypropylene with unique properties of molecular weight and chain structure different from other active sites. The reason of the multiplicity of active sites was determined by the presence of different locations of surface titanium species coordinated with other surface atoms or molecules. These different surface complexes of active species determine the multiple active site nature of catalyst which replicates the microtacticity, molecular weight and chain microstructure distribution of polymer. Keywords: Ziegler-Natta catalyst; Multiple active sites; Flory components; Computer simulation; Deconvolution; MWD. DOI: http://dx.doi.org/10.3329/bjsir.v46i4.9596 BJSIR 2011; 46(4): 487-494

Jack bean urease (EC 3.5.1.5). IV. The molecular size and the mechanism of inhibition by hydroxamic acids. Spectrophotometric titration of enzymes with reversible inhibitors

1980 ◽  
Vol 58 (12) ◽  
pp. 1323-1334 ◽  
Author(s):  
Nicholas E. Dixon ◽  
John A. Hinds ◽  
Ann K. Fihelly ◽  
Carlo Gazzola ◽  
Donald J. Winzor ◽  
...  
Keyword(s):  
Molecular Weight ◽  
Active Site ◽  
Binding Sites ◽  
Spectrophotometric Titration ◽  
Hydroxamic Acids ◽  
Jack Bean Urease ◽  
Equivalent Weight ◽  
Guanidinium Chloride ◽  
Jack Bean ◽  
Equilibrium Ultracentrifugation

Kinetic, spectral, and other studies establish that hydroxamic acids bind reversibly to active-site nickel ion in jack bean urease. Equilibrium ultracentrifugation studies establish that the molecular weight of native urease is 590 000 ± 30 000 while that of the subunit formed in 6 M guanidinium chloride in the presence of β-mercaptoethanol is ~95 000. Essentially the same subunit molecular weight (~93 000) is found by polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate, subsequent to denaturation in a guanidinium chloride – β-mercaptoethanol system at various temperatures. Coupled with an equivalent weight of 96 600 for binding of the inhibitors acetohydroxamic acid and phosphoramidate, these results establish securely that urease is a hexamer with one active site per 96 600-dalton subunit. Consistent values for the equivalent weight are obtained by a routine spectrophotometric titration of the active site of freshly prepared urease with trans-cinnamoylhydroxamic acid. General equations are derived which describe spectrophotometric titrations of binding sites of any enzyme with a reversible inhibitor. These equations allow the evaluation of the difference spectrum of the protein–inhibitor complex even when the binding sites cannot readily be saturated with the inhibitor or vice versa.

Crystallographic binding studies of rat peroxisomal multifunctional enzyme type 1 with 3-ketodecanoyl-CoA: capturing active and inactive states of its hydratase and dehydrogenase catalytic sites

2020 ◽  
Vol 76 (12) ◽  
pp. 1256-1269
Author(s):  
Shruthi Sridhar ◽  
Werner Schmitz ◽  
J. Kalervo Hiltunen ◽  
Rajaram Venkatesan ◽  
Ulrich Bergmann ◽  
...  
Keyword(s):  
Active Site ◽  
Active Sites ◽  
Crystal Form ◽  
Terminal Part ◽  
Binding Studies ◽  
Treatment Protocols ◽  
Multifunctional Enzyme ◽  
Catalytic Sites ◽  
Hydroxyacyl Coa Dehydrogenase

The peroxisomal multifunctional enzyme type 1 (MFE1) catalyzes two successive reactions in the β-oxidation cycle: the 2E-enoyl-CoA hydratase (ECH) and NAD+-dependent 3S-hydroxyacyl-CoA dehydrogenase (HAD) reactions. MFE1 is a monomeric enzyme that has five domains. The N-terminal part (domains A and B) adopts the crotonase fold and the C-terminal part (domains C, D and E) adopts the HAD fold. A new crystal form of MFE1 has captured a conformation in which both active sites are noncompetent. This structure, at 1.7 Å resolution, shows the importance of the interactions between Phe272 in domain B (the linker helix; helix H10 of the crotonase fold) and the beginning of loop 2 (of the crotonase fold) in stabilizing the competent ECH active-site geometry. In addition, protein crystallographic binding studies using optimized crystal-treatment protocols have captured a structure with both the 3-ketodecanoyl-CoA product and NAD+ bound in the HAD active site, showing the interactions between 3-ketodecanoyl-CoA and residues of the C, D and E domains. Structural comparisons show the importance of domain movements, in particular of the C domain with respect to the D/E domains and of the A domain with respect to the HAD part. These comparisons suggest that the N-terminal part of the linker helix, which interacts tightly with domains A and E, functions as a hinge region for movement of the A domain with respect to the HAD part.

Purification and properties of a carboxylesterase from the liver of tiger shark (Galeocerdo cuvier)

1976 ◽  
Vol 54 (5) ◽  
pp. 453-461 ◽  
Author(s):  
Keith Scott ◽  
Susan E. Hamilton ◽  
Burt Zerner
Keyword(s):  
Molecular Weight ◽  
Active Site ◽  
Sedimentation Equilibrium ◽  
Acetone Powder ◽  
Tiger Shark ◽  
Equivalent Weight ◽  
Alkyl Esters ◽  
Galeocerdo Cuvier ◽  
Purification And Properties ◽  
Marked Preference

A procedure is described for the purification of a carboxylesterase from shark liver, using a chloroform-acetone powder prepared from the liver as the starting material. The yield of purified enzyme is ~50 mg from 530 g of chloroform–acetone powder. The preparation is electrophoretically homogeneous. Active-site titrations with paraoxon gave an equivalent weight of ~83 000. The molecular weight, found from sedimentation equilibrium experiments, is ~80 000. There is no evidence of any association or dissociation of this species. The enzyme shows a marked preference for aryl esters over alkyl esters, in contrast to other carboxylesterases so far studied. The amino acid composition of the purified enzyme is reported.

scholarly journals A Unique Ru-N4-P Coordinated Structure Synergistically Waking Up the Nonmetal P Active Site for Hydrogen Production

Research ◽  
2020 ◽  
Vol 2020 ◽  
pp. 1-12
Author(s):  
Chuanqiang Wu ◽  
Shiqing Ding ◽  
Daobin Liu ◽  
Dongdong Li ◽  
Shuangming Chen ◽  
...  
Keyword(s):  
Hydrogen Evolution ◽  
Active Site ◽  
Active Sites ◽  
Density Functional ◽  
Density Functional Theory Calculations ◽  
Highly Efficient ◽  
Catalytic Sites ◽  
Catalytically Active ◽  
Doped Graphene ◽  
Waking Up

Numerous experiments have demonstrated that the metal atom is the active center of monoatomic catalysts for hydrogen evolution reaction (HER), while the active sites of nonmetal doped atoms are often neglected. By combining theoretical prediction and experimental verification, we designed a unique ternary Ru-N4-P coordination structure constructed by monodispersed Ru atoms supported on N,P dual-doped graphene for highly efficient hydrogen evolution in acid solution. The density functional theory calculations indicate that the charge polarization will lead to the most charge accumulation at P atoms, which results in a distinct nonmetallic P active sites with the moderate H∗ adsorption energy. Notably, these P atoms mainly supply highly efficient catalytic sites with ultrasmall absorption energy of 0.007 eV. Correspondingly, the Ru-N4-P demonstrated outstanding HER performance not only in an acidic condition but also in alkaline environment. Notably, the performance of Ru-NPC catalyst at high current is even superior to the commercial Pt/C catalysts, whether in acidic or alkaline medium. Our in situ synchrotron radiation infrared spectra demonstrate that a P-Hads intermediate is continually emerging on the Ru-NPC catalyst, actively proving the nonmetallic P catalytically active site in HER that is very different with previously reported metallic sites.

scholarly journals Atomic Control of Active Site Ensembles in Ordered Alloys to Enhance Hydrogenation Selectivity

2021 ◽  
Author(s):  
Anish Dasgupta ◽  
Hoaran He ◽  
Rushi Gong ◽  
Shun-Li Shang ◽  
Eric Zimmerer ◽  
...  
Keyword(s):  
Active Site ◽  
Active Sites ◽  
Density Functional ◽  
Functional Theory ◽  
Ethane Conversion ◽  
Precise Control ◽  
Atom Manipulation ◽  
Catalytic Sites ◽  
Ordered Alloys ◽  
Ethylene Selectivity

Abstract Intermetallic compounds offer unique opportunities for atom-by-atom manipulation of catalytic ensembles through precise stoichiometric control. The [Pd, (M), Zn] γ-brass phase allows for controlled synthesis of Pd-M-Pd catalytic sites (M = Zn, Pd, Cu, Ag and Au) isolated in an inert Zn matrix. These multi-atom heteronuclear active sites are catalytically distinct from Pd single atoms and fully coordinated Pd. We quantify the unexpectedly large effect of active site composition (i.e., identity of M atom in Pd-M-Pd sites) on ethylene selectivity during acetylene semi-hydrogenation. Subtle stoichiometric control demonstrates Pd-Pd-Pd sites are active for ethylene hydrogenation, whereas Pd-Zn-Pd sites show no measurable ethylene to ethane conversion. Agreement between experimental and density functional theory predicted activities and selectivities demonstrates precise control of Pd-M-Pd active site composition. The diversity and well-defined structure of intermetallics can be utilized to design active sites assembled with atomic-level precision.

scholarly journals Inactivation of TEM-1 β-lactamase by 6-acetylmethylenepenicillanic acid

1983 ◽  
Vol 209 (3) ◽  
pp. 609-615 ◽  
Author(s):  
M Arisawa ◽  
R Then
Keyword(s):  
Rate Constant ◽  
Active Site ◽  
Native Enzyme ◽  
Stable Form ◽  
Beta Lactamase ◽  
Irreversible Inhibitor ◽  
Beta Lactamases ◽  
Inactivation Constant ◽  
Inactivation Process ◽  
Fold Excess

6-Acetylmethylenepenicillanic acid is a new kinetically irreversible inhibitor of various beta-lactamases. Interaction between 6-acetylmethylenepenicillanate and purified TEM-1 beta-lactamase during the inactivation process was investigated. 6-Acetylmethylenepenicillanate inhibited the enzyme in a second-order fashion with a rate constant of 0.61 microM-1 . S-1. The apparent inactivation constant decreased in the presence of increasing concentrations of the substrate benzylpenicillin. Native enzyme (pI 5.4) was converted into two inactive forms with pI 5.25 and 5.15, the latter form being transient and readily converted into the more stable form with pI 5.15. Even a 50-fold excess of inhibitor over enzyme did not produce any other inactivated species of the enzyme. All the results obtained suggest that 6-acetylmethylenepenicillanate is a potent irreversible and active-site-directed inhibitor of TEM-1 beta-lactamase.

Catalytic Resonance Theory: Parallel Reaction Pathway Control

2019 ◽  
Author(s):  
M. Alexander Ardagh ◽  
Manish Shetty ◽  
Anatoliy Kuznetsov ◽  
Qi Zhang ◽  
Phillip Christopher ◽  
...  
Keyword(s):  
Chemical Reactions ◽  
Active Site ◽  
Active Sites ◽  
Reaction Pathway ◽  
Control Strategies ◽  
Oscillation Amplitude ◽  
Catalytic Performance ◽  
Parallel Reaction ◽  
Resonance Theory ◽  
Static Conditions

Catalytic enhancement of chemical reactions via heterogeneous materials occurs through stabilization of transition states at designed active sites, but dramatically greater rate acceleration on that same active site is achieved when the surface intermediates oscillate in binding energy. The applied oscillation amplitude and frequency can accelerate reactions orders of magnitude above the catalytic rates of static systems, provided the active site dynamics are tuned to the natural frequencies of the surface chemistry. In this work, differences in the characteristics of parallel reactions are exploited via selective application of active site dynamics (0 < ΔU < 1.0 eV amplitude, 10<sup>-6</sup> < f < 10<sup>4</sup> Hz frequency) to control the extent of competing reactions occurring on the shared catalytic surface. Simulation of multiple parallel reaction systems with broad range of variation in chemical parameters revealed that parallel chemistries are highly tunable in selectivity between either pure product, even when specific products are not selectively produced under static conditions. Two mechanisms leading to dynamic selectivity control were identified: (i) surface thermodynamic control of one product species under strong binding conditions, or (ii) catalytic resonance of the kinetics of one reaction over the other. These dynamic parallel pathway control strategies applied to a host of chemical conditions indicate significant potential for improving the catalytic performance of many important industrial chemical reactions beyond their existing static performance.

scholarly journals Insights on forming N,O-coordinated Cu single-atom catalysts for electrochemical reduction CO2 to methane

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Yanming Cai ◽  
Jiaju Fu ◽  
Yang Zhou ◽  
Yu-Chung Chang ◽  
Qianhao Min ◽  
...  
Keyword(s):  
Energy Barrier ◽  
Active Sites ◽  
Theoretical Calculations ◽  
High Energy ◽  
Single Atom ◽  
Faradaic Efficiency ◽  
High Energy Barrier ◽  
Catalytic Sites ◽  
Electron Reduction ◽  
First Time

AbstractSingle-atom catalysts (SACs) are promising candidates to catalyze electrochemical CO2 reduction (ECR) due to maximized atomic utilization. However, products are usually limited to CO instead of hydrocarbons or oxygenates due to unfavorable high energy barrier for further electron transfer on synthesized single atom catalytic sites. Here we report a novel partial-carbonization strategy to modify the electronic structures of center atoms on SACs for lowering the overall endothermic energy of key intermediates. A carbon-dots-based SAC margined with unique CuN2O2 sites was synthesized for the first time. The introduction of oxygen ligands brings remarkably high Faradaic efficiency (78%) and selectivity (99% of ECR products) for electrochemical converting CO2 to CH4 with current density of 40 mA·cm-2 in aqueous electrolytes, surpassing most reported SACs which stop at two-electron reduction. Theoretical calculations further revealed that the high selectivity and activity on CuN2O2 active sites are due to the proper elevated CH4 and H2 energy barrier and fine-tuned electronic structure of Cu active sites.

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