scholarly journals The preparation of ribosomal ribonucleic acid from whole bacteria

1968 ◽  
Vol 106 (4) ◽  
pp. 897-903 ◽  
Author(s):  
H. K. Robinson ◽  
H. E. Wade
Keyword(s):  
Escherichia Coli ◽  
Cell Wall ◽  
Pseudomonas Fluorescens ◽  
Ribosomal Rna ◽  
Staphylococcus Epidermidis ◽  
Ribonucleic Acid ◽  
Potassium Acetate ◽  
Sedimentation Pattern ◽  
Simple Method ◽  
Ribosomal Ribonucleic Acid

1. A simple method for the preparation of ribonuclease-free ribosomal RNA is described in which ribonuclease-deficient bacteria are treated with acetone and the RNA is extracted with phenol and purified by precipitating it with potassium acetate. The treatment with acetone appears to render the cell wall permeable to RNA but not to DNA during the extraction with phenol. The method thus avoids the need to disrupt the bacteria and greatly simplifies the subsequent purification. 2. The method has been used successfully with ribonuclease-deficient strains of Escherichia coli, Pseudomonas fluorescens and Staphylococcus epidermidis. The recovered purified RNA accounts for about 70% of the total ribosomal RNA and shows the normal sedimentation pattern of the 16s and 23s components in the analytical centrifuge.

scholarly journals Identical 3′-terminal octanucleotide sequence in 18S ribosomal ribonucleic acid from different eukaryotes. A proposed role for this sequence in the recognition of terminator codons

1974 ◽  
Vol 141 (3) ◽  
pp. 609-615 ◽  
Author(s):  
John Shine ◽  
Lynn Dalgarno
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Protein Synthesis ◽  
Drosophila Melanogaster ◽  
Ribosomal Rna ◽  
Ribonucleic Acid ◽  
18S Rrna ◽  
Base Sequence ◽  
Terminal Sequence ◽  
Ribosomal Ribonucleic Acid ◽  
Rrna Species

The 3′-terminal sequence of 18S ribosomal RNA from Drosophila melanogaster and Saccharomyces cerevisiae was determined by stepwise degradation from the 3′-terminus and labelling with [3H]isoniazid. The sequence G-A-U-C-A-U-U-AOH was found at the 3′-terminus of both 18S rRNA species. Less extensive data for 18S RNA from a number of other eukaryotes are consistent with the same 3′-terminal sequence, and an identical sequence has previously been reported for the 3′-end of rabbit reticulocyte 18S rRNA (Hunt, 1970). These results suggest that the base sequence in this region is strongly conserved and may be identical in all eukaryotes. As the 3′-terminal hexanucleotide is complementary to eukaryotic terminator codons we discuss the possibility that the 3′-end of 18S rRNA may have a direct base-pairing role in the termination of protein synthesis.

Ribosomal ribonucleic acid cistron homologies among Hyphomicrobium and various other bacteria

1977 ◽  
Vol 23 (4) ◽  
pp. 478-481 ◽  
Author(s):  
Richard L. Moore
Keyword(s):  
Cell Wall ◽  
Ribonucleic Acid ◽  
Deoxyribonucleic Acid ◽  
Gram Positive ◽  
Gram Negative ◽  
Group Iii ◽  
Hybrid Formation ◽  
Group I ◽  
Ribosomal Ribonucleic Acid ◽  
Taxonomic Implications

The extent of hybrid formation between the ribosomal ribonucleic acid (r-RNA) of Hyphomicrobium strain B-522 and deoxyribonucleic acid (DNA) from bacteria of 21 different genera was examined. Three generalized groupings were formed. Group I (72–100%) consisted entirely of other strains of Hyphomicrobium. Representatives of the genera Rhodopseudomonas, Chromatium, Caulobacter, Prosthecomicrobium, Rhodomicrobium, Hyphomonas, and Hyphomicrobium made up group II (49–69%). The remaining Gram-negative, Gram-positive, and cell wall – less bacteria fell into group III (12–40%). The taxonomic implications of these results are discussed.

scholarly journals The binding of spermine to the ribosomes and ribosomal ribonucleic acid from Bacillus stearothermophilus

1969 ◽  
Vol 113 (1) ◽  
pp. 117-121 ◽  
Author(s):  
L. Stevens
Keyword(s):  
Ionic Strength ◽  
Ribosomal Rna ◽  
Ribonucleic Acid ◽  
Binding Sites ◽  
Bacillus Stearothermophilus ◽  
Gel Filtration ◽  
Ribosomal Ribonucleic Acid ◽  
Number Of Binding Sites ◽  
Filtration Technique

1. The total intracellular concentrations of Na+, K+, Mg2+, spermine, spermidine and RNA were measured in Bacillus stearothermophilus. 2. The binding of spermine to ribosomes and to ribosomal RNA from B. stearothermophilus was studied under various conditions by using a gel-filtration technique. 3. The affinity of spermine for ribosomes and for ribosomal RNA decreased with increasing ionic strength of the medium in which they were suspended. 4. The extent of spermine binding did not change appreciably in the temperature range 4–60°. 5. Optimum binding occurred at about pH7·0. 6. The number of binding sites for spermine on either ribosomes or ribosomal RNA was 0·10–0·13/RNA phosphate group. 7. A high proportion of the intracellular spermine is likely to be bound to the ribosomes in vivo; spermine competes with Mg2+ on equal terms for sites on the ribosomes.

scholarly journals Dual pathways for ribonucleic acid turnover in WI-38 but not in I-cell human diploid fibroblasts.

1981 ◽  
Vol 1 (1) ◽  
pp. 75-81 ◽  
Author(s):  
M Sameshima ◽  
S A Liebhaber ◽  
D Schlessinger
Keyword(s):  
Ribosomal Rna ◽  
Ribonucleic Acid ◽  
Protein Turnover ◽  
Rna Turnover ◽  
Turnover Rates ◽  
Diploid Fibroblasts ◽  
Human Diploid Fibroblasts ◽  
Cytoplasmic Rna ◽  
Ribosomal Ribonucleic Acid ◽  
I Cells

The turnover rates of 3H-labeled 18S ribosomal ribonucleic acid (RNA), 28S ribosomal RNA, transfer RNA, and total cytoplasmic RNA were very similar in growing WI-38 diploid fibroblasts. The rate of turnover was at least twofold greater when cell growth stopped due to cell confluence, 3H irradiation, or treatment with 20 mM NaN3 or 2 mM NaF. In contrast, the rate of total 3H-protein turnover was the same in growing and nongrowing cells. Both RNA and protein turnovers were accelerated at least twofold in WI-38 cells deprived of serum, and this increase in turnover was inhibited by NH4Cl. These results are consistent with two pathways for RNA turnover, one of them being nonlysosomal and the other being lysosome mediated (NH4Cl sensitive), as has been suggested for protein turnover. Also consistent with the notion of two pathways for RNA turnover were findings with I-cells, which are deficient for many lysosomal enzymes, and in which all RNA turnover was nonlysosomal (NH4Cl resistant).

Sign in / Sign up

Export Citation Format

Share Document