Protein–protein cross-reactions involving plastocyanin, cytochrome f and azurin: self-exchange rate constants and related studies with inorganic complexes

1992 ◽  
pp. 2145-2151 ◽  
Author(s):  
D. G. A. Harshani de Silva ◽  
Douglas Beoku-Betts ◽  
Panayotis Kyritsis ◽  
K. Govindaraju ◽  
Roy Powls ◽  
...  
Keyword(s):  
Exchange Rate ◽  
Rate Constants ◽  
Cytochrome F ◽  
Cross Reactions ◽  
Inorganic Complexes

Kinetics of electron-transfer reactions of the Co(bpyO2)32+/3+ couple in acetonitrile

1992 ◽  
Vol 70 (1) ◽  
pp. 39-45 ◽  
Author(s):  
Donal H. Macartney ◽  
Samuel Mak
Keyword(s):  
Electron Transfer ◽  
Exchange Rate ◽  
Rate Constants ◽  
Marcus Theory ◽  
Transfer Reactions ◽  
Electron Transfer Reactions ◽  
Cross Reactions ◽  
The Cross ◽  
Polypyridine Complexes ◽  
Kinetics Of

The kinetics of the outer-sphere electron transfer reactions of tris(1,1′-dioxo-2,2′-bipyridine)cobalt(II) and (III) with a series of nickel polyaza macrocycles, FeL3n+ and OsL32+ complexes (L is 2,2′-bipyridine or 1,10-phenanthroline, and substituted derivatives), and Rh2(O2CCH3)4(CH3CN)2+ have been investigated in acetonitrile at 25.0 °C. An application of the Marcus theory relationship to the cross-reaction rate constants yielded apparent Co(bpyO2)32+/3+ self-exchange rate constants of 102 M−1 s−1 from the nickel macrocycle cross-reactions and 10−1 M−1 s−1 from the cross-reactions with the metal polypyridine complexes. The latter cross-reactions are considered to be non-adiabatic due to a mismatch in the donor/acceptor orbital symmetries. The electron exchange rate constant is compared with the exchange rate constants for other Co(II)/Co(III) complex couples and M(bpyO2)32+/3+ couples of other first-row transition metals, and discussed in terms of inner-sphere and solvent reorganization barriers. Keywords: electron transfer, Marcus theory relationship, cobalt(II)/(III) couples, 1,1′-dioxo-2,2′-bipyridine.

Synthetic models for active sites of reduced blue copper proteins: minimal geometric change between two oxidation states for fast self-exchange rate constants

2004 ◽  
Vol 7 (11) ◽  
pp. 1188-1190 ◽  
Author(s):  
Kiyoshi Fujisawa ◽  
Koyu Fujita ◽  
Tatsuya Takahashi ◽  
Nobumasa Kitajima ◽  
Yoshihiko Moro-oka ◽  
...  
Keyword(s):  
Exchange Rate ◽  
Rate Constants ◽  
Active Sites ◽  
Oxidation States ◽  
Copper Proteins ◽  
Blue Copper Proteins ◽  
Blue Copper ◽  
Synthetic Models

scholarly journals Global simulations of monoterpene-derived peroxy radical fates and the distributions of highly oxygenated organic molecules (HOM) and accretion products

2021 ◽  
Author(s):  
Ruochong Xu ◽  
Joel A. Thornton ◽  
Ben H. Lee ◽  
Yanxu Zhang ◽  
Lyatt Jaeglé ◽  
...  
Keyword(s):  
Rate Constants ◽  
First Generation ◽  
Transport Model ◽  
Peroxy Radical ◽  
Organic Aerosol ◽  
Laboratory Studies ◽  
Chemical Transport Model ◽  
Cross Reactions ◽  
Formation Kinetics ◽  
The Impact

Abstract. We evaluate monoterpene-derived peroxy radical (MT-RO2) unimolecular autoxidation and self and cross reactions with other RO2 in the GEOS-Chem global chemical transport model. Formation of associated highly oxygenated organic molecule (HOM) and accretion products are tracked in competition with other bimolecular reactions. Autoxidation is the dominant fate up to 6–8 km for first-generation MT-RO2 which can undergo unimolecular H-shifts. Reaction with NO can be a more common fate for H-shift rate constants < 0.1 s−1 or at altitudes higher than 8 km due to the imposed Arrhenius temperature dependence of unimolecular H-shifts. For MT-derived HOM-RO2, generated by multi-step autoxidation of first-generation MT-RO2, reaction with other RO2 is predicted to be the major fate throughout most of the boreal and tropical forested regions, while reaction with NO dominates in temperate and subtropical forests of the Northern Hemisphere. The newly added reactions result in ~4 % global average decrease of HO2 and RO2 mainly due to faster self-/cross-reactions of MT-RO2, but the impact upon HO2/OH/NOx abundances is only important in the planetary boundary layer (PBL) over portions of tropical forests. Within the bounds of formation kinetics and HOM photochemical lifetime constraints from laboratory studies, predicted HOM concentrations in MT-rich regions and seasons reach 10 % or even exceed total organic aerosol as predicted by the standard GEOS-Chem model. Comparisons to observations reveal large uncertainties remain for key reaction parameters and processes, especially the photochemical lifetime of HOM and associated accretion products. Using the highest reported yields and H-shift rate constants of MT-RO2 that undergo autoxidation, HOM concentrations tend to exceed the limited set of observations. Similarly, we infer that RO2 cross reactions rate constants near the gas-kinetic limit with accretion product branching greater than ~0.25 are inconsistent with total organic aerosol unless there is rapid decomposition of accretion products, the accretion products have saturation vapor concentrations > > 1 μg m−3, or modeled MT emission rates are overestimated. This work suggests further observations and laboratory studies related to MT-RO2 derived HOM and gas-phase accretion product formation kinetics, and especially their atmospheric fate, such as gas-particle partitioning, multi-phase chemistry, and net SOA formation, are needed.

Reduction of hexaammineruthenium(III) ions by a series of tris(polypyridyl)chromium(II) ions – Revisiting the Cr(NN)33+/2+ self-exchange rate

2001 ◽  
Vol 79 (7) ◽  
pp. 1124-1127 ◽  
Author(s):  
K Omar Zahir
Keyword(s):  
Exchange Rate ◽  
Excited States ◽  
Rate Constants ◽  
Driving Force ◽  
Flash Photolysis ◽  
Laser Flash Photolysis ◽  
Outer Sphere ◽  
Laser Flash ◽  
Exchange Rate Constant ◽  
Kinetics Of

The kinetics of the outer-sphere oxidation of Cr(NN)32+ ions (NN = 2,2'-bipyridine, 1,10-phenanthroline, and their substituted analogs) by hexaammineruthenium(III) was studied using laser flash photolysis. The Cr(NN)32+ ions were generated via the reductive quenching of the *Cr(NN)33+ excited states by oxalate ions or by H2edta2–. The second-order rate constants were found to vary with the driving force of the reaction. The rate constants increase from (7.1 ± 0.5) × 106 M–1 s–1 for Cr(5-Clphen)32+ to (2.6 ± 0.2) × 108 M–1 s–1 for Cr(4,7-Me2phen)32+. The self-exchange rate constant for the couple (Cr(NN)33+/2+) was calculated by applying Marcus cross relation to present and other known reactions of Cr(NN)3n+ ions, where n = 3 or 2 with various reactants and is estimated to be (6 ± 4) × 107 M–1 s–1.Key words: tris(polypyridyl)chromium(II)/(III) self-exchange rate, hexaammineruthenium(III), oxidation of Cr(NN)32+.

Base-catalyzed hydrogen isotope exchange of thiocamphor: α-thioenolization rate constants

1978 ◽  
Vol 56 (19) ◽  
pp. 2605-2606 ◽  
Author(s):  
Nick Henry Werstiuk ◽  
Paul Andrews
Keyword(s):  
Exchange Rate ◽  
Rate Constants ◽  
Hydrogen Isotope ◽  
Isotope Exchange ◽  
Deuterium Exchange ◽  
Hydrogen Isotope Exchange

The rates of base-catalyzed protium–deuterium exchange (α-thioenolization) of the exo and endo protons of thiocamphor (1), in 2:1 dioxane-D2O at 25.0 ± 0.5 °C, have been determined by monitoring the uptake of deuterium mass spectrometrically. The exo and endo exchange rate constants, 2.20 × 10−2 and 5.60 × 10−4 M−1 s−1, respectively, are 23.2 and 12.3 times larger than the rate constants for exo and endo exchange in camphor (2). Factors which may determine the rate enhancements are discussed.

Electron transfer kinetics of cobaloxime complexes

1996 ◽  
Vol 74 (5) ◽  
pp. 658-665 ◽  
Author(s):  
Kefei Wang ◽  
R.B. Jordan
Keyword(s):  
Electron Transfer ◽  
Exchange Rate ◽  
Rate Constants ◽  
Ph Dependence ◽  
Outer Sphere ◽  
The Self ◽  
Oxidation Of Co ◽  
Reduction Potentials ◽  
Inner Sphere ◽  
Kinetics Of

The rates of oxidation of CoII(dmgBF2)2(OH2)2 by CoIII(NH3)5X2+ (X = Br−, Cl−, and N3−) have been studied at 25 °C in 0.10 M LiClO4. The rate constants are 50 ± 9, 2.6 ± 0.2, and 5.9 ± 1.0 M−1 s−1 for X = Br−, Cl−, and N3−, respectively, in 0.01 M acetate buffer at pH 4.7. The relative rates are consistent with the inner-sphere bridging mechanism established earlier by Adin and Espenson for the analogous reactions of CoII(dmgH)2(OH2)2. The rate constants with CoII(dmgBF2)2(OH2)2 typically are ~103 times smaller and this is attributed largely to the smaller driving force for the CoII(dmgBF2)2(OH2)2 complex. The outer-sphere oxidations of cobalt(II) sepulchrate by CoIII(dmgH)2(OH2)2+ (pH 4.76–7.35, acetate, MES, and PIPES buffers) and CoIII(dmgBF2)2(OH2)2+ (pH 3.3–7.42, chloroacetate, acetate, MES, and PIPES buffers) have been studied. The pH dependence gives the following rate constants (M−1 s−1) for the species indicated: (1.55 ± 0.09) × 105 (CoIII(dmgBF2)2(OH2)2+); (5.5 ± 0.3) × 103 (CoII(dmgH)2(OH2)2+); (3.1 ± 0.5) × 102 (CoIII(dmgH)2(OH2)(OH)); (2.5 ± 0.3) × 102 (CoIII(dmgBF2)2(OH2)(OH)). The known reduction potentials for cobalt(III) sepulchrate and the diaqua complexes, and the self-exchange rate for cobalt(II/III) sepulchrate, are used to estimate the self-exchange rate constants for the dioximate complexes. Comparisons to other reactions with cobalt sepulchrate indicates best estimates of the self-exchange rate constants are ~2.4 × 10−2 M−1 s−1 for CoII/III(dmgH)2(OH2)2and ~5.7 × 10−3 M−1 s−1 for CoII/III(dmgBF2)2(OH2)2. Key words: electron transfer, cobaloxime, inner sphere, outer sphere, self-exchange.

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