scholarly journals Retention of strong intramolecular hydrogen bonds in high polarity solvents in binaphthalene–benzamide derivatives: extensive NMR studies

RSC Advances ◽  
2019 ◽  
Vol 9 (56) ◽  
pp. 32759-32770 ◽  
Author(s):  
Arun Kumar Patel ◽  
Sandeep Kumar Mishra ◽  
Kiran Krishnamurthy ◽  
N. Suryaprakash
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Strong Hydrogen Bond ◽  
Nmr Studies ◽  
Intramolecular Hydrogen Bonds ◽  
Intramolecular Hydrogen ◽  
Benzamide Derivatives ◽  
High Polarity

NMR studies reveal very strong hydrogen bond unbreakable even in high polarity solvents.

Crystal structure of osimertinib mesylate Form B (Tagrisso), (C28H34N7O2)(CH3O3S)

2021 ◽  
pp. 1-9
Author(s):  
James A. Kaduk ◽  
Nicholas C. Boaz ◽  
Emma L. Markun ◽  
Amy M. Gindhart ◽  
Thomas N. Blanton
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Powder Diffraction ◽  
Density Functional ◽  
Amino Nitrogen ◽  
Strong Hydrogen Bond ◽  
Powder Diffraction File ◽  
Dimethylamino Group ◽  
Intramolecular Hydrogen

The crystal structure of osimertinib mesylate Form B has been solved and refined using synchrotron X-ray powder diffraction data and optimized using density functional techniques. Osimertinib mesylate Form B crystallizes in space group P-1 (#2) with a = 11.42912(17), b = 11.72274(24), c = 13.32213(22) Å, α = 69.0265(5), β = 74.5914(4), γ = 66.4007(4)°, V = 1511.557(12) Å3, and Z = 2. The crystal structure is characterized by alternating layers of cation–anion and parallel stacking interactions parallel to the ab-planes. The cation is protonated at the nitrogen atom of the dimethylamino group, which forms a strong hydrogen bond between the cation and the anion. That hydrogen atom also participates in a weaker intramolecular hydrogen bond to an amino nitrogen. There are two additional N–H⋅⋅⋅O hydrogen bonds between the cation and the anion. Several C–H⋅⋅⋅O hydrogen bonds also link the cations and anions. The powder pattern has been submitted to ICDD® for inclusion in the Powder Diffraction File™.

Halogen Bonding Organocatalysis Enhanced through Intramolecular Hydrogen Bonds

2022 ◽  
Author(s):  
Asia Marie S Riel ◽  
Daniel Adam Decato ◽  
Jiyu Sun ◽  
Orion Berryman
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Halogen Bond ◽  
Direct Interaction ◽  
Halogen Bonding ◽  
Intramolecular Hydrogen Bonds ◽  
Intramolecular Hydrogen

Recent results indicate a halogen bond donor is strengthened through direct interaction with a hydrogen bond to the electron-rich belt of the halogen. Here, this Hydrogen Bond enhanced Halogen Bond...

Intramolecular hydrogen bonds and the orientation of amino groupsin o-phenylenediamines

1967 ◽  
Vol 45 (19) ◽  
pp. 2135-2141 ◽  
Author(s):  
P. J. Krueger
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Infrared Absorption ◽  
Substituent Effect ◽  
Proton Donor ◽  
Proton Acceptor ◽  
Amino Groups ◽  
Intramolecular Hydrogen Bonds ◽  
Infrared Absorption Spectra ◽  
Intramolecular Hydrogen

The infrared absorption spectra of partially deuterated o-phenylenediamine and 4,5-di-methyl-, 4-methyl-, and 4-chloro-o-phenylenediamine in dilute CCl4 solution show double intramolecular [Formula: see text] hydrogen bonds in which the two NHD groups are equivalent and each group acts as both a proton donor and a proton acceptor. The ring substituent effect on this interaction in these compounds is small. In 4-methoxy-o-phenylenediamine, the amino groups are not equivalent, but double intramolecular hydrogen bonds are still present. In 4-nitro-o-phenylenediamine, only one intramolecular [Formula: see text] hydrogen bond appears to exist. The effect of N-substitution on some of these observations is discussed.

scholarly journals Interactions of Aggregating Peptides Probed by IR-UV Action Spectroscopy

2018 ◽  
Author(s):  
Sjors Bakels ◽  
E.M. Meijer ◽  
Mart Greuell ◽  
Sebastiaan Porskamp ◽  
George Rouwhorst ◽  
...  
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Self Assembly ◽  
Intermolecular Hydrogen Bond ◽  
Beta Sheet ◽  
Dispersion Interactions ◽  
Intramolecular Hydrogen Bonds ◽  
Action Spectroscopy ◽  
Hydrogen Bond Interactions ◽  
Intramolecular Hydrogen

Peptide aggregation, the self-assembly of peptides into structured beta-sheet fibril structures, is driven by a combination of intra- and intermolecular interactions. Here, the interplay between intramolecular and formed inter-sheet hydrogen bonds and the effect of dispersion interactions on the formation of neutral, isolated, peptide dimers is studied by infrared action spectroscopy. Therefore, four different homo- and hetereogeneous dimers formed from three different alanine-based model peptides have been studied under controlled and isolated conditions. The peptides differ from one another in the presence and location of a UV chromophore containing cap on either the C- or N-terminus. Conformations of the monomers of the peptides direct the final dimer structure: strongly hydrogen bonded or folded structures result in weakly bound dimers. Here the intramolecular hydrogen bonds are favored over new intermolecular hydrogen bond interactions. In contrast, linearly folded monomers are the ideal template to form parallel beta-sheet type structures. The weak intramolecular hydrogen bonds present in the linear monomers are replaced by the stronger inter-sheet hydrogen bond interactions. The influence of π-π disperion interactions on the structure of the dimer is minimal, the phenyl rings have the tendency to fold away from the peptide backbone to favour intermolecular hydrogen bond interactions. Quantum chemical calculations confirm our experimental observations.

scholarly journals Synthesis and Heterocyclization of 4-Hydroxy-3 - ((2-hydroxy-4,4-dimethyl-6-oxocyclohex1-en-1-yl) (aryl) methyl) -2H-chromen-2-ones

2020 ◽  
Vol 20 (4) ◽  
pp. 362-371
Author(s):  
Alexander Yu. Kostritskiy ◽  
◽  
Marina G. Nakonechnikova ◽  
Olga V. Fedotova ◽  
Nina V. Pchelintseva ◽  
...  
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
13C Nmr ◽  
Intermediate Complex ◽  
Intramolecular Hydrogen Bonds ◽  
Propionic Anhydride ◽  
Intramolecular Hydrogen ◽  
Aryl Methyl

The possibility of obtaining asymmetric 1,5-diketones based on 4-hydroxy-2H-chromen-2-one and dimedone by three-component condensation in the presence of L-proline as a catalyst is shown. As a result, a series of 4-hydroxy3 - ((2-hydroxy-4,4-dimethyl-6-oxocyclohex1-en-1-yl) (aryl) methyl) -2H-chromen-2-ones was obtained with a yield of 25 up to 73%. The study revealed that the highest yield was observed for compounds containing fragments of ortho-substituted aldehydes capable of forming a hydrogen bond. For meta- and para-substituted – the lowest yield was observed. In the case of ortho-substitution this can be probably explained due to the stabilization of the intermediate complex by two intramolecular hydrogen bonds, which makes it possible to selectively obtain only one final product – 4-hydroxy-3 -((2-hydroxy4,4-dimethyl-6-oxocyclohex-1- en-1-yl) (aryl) methyl) -2Hchromen-2-one. The structure of the obtained products was confirmed by 1 H, 13C NMR, HSQC, HMBC spectroscopy. Considering the 1,5-diketone fragment for the above-described compounds, the possibility of their O-heterocyclization by propionic anhydride was suggested. Boiling 4-hydroxy-3 - ((2-hydroxy-4,4-dimethyl-6-oxocyclohex-1-en-1-yl) (aryl) methyl) -2Hchromen-2-ones in anhydride medium for an hour resulted in obtaining a series of 7- (aryl) -10,10-dimethyl-7,9,10,11-tetrahydro-6H, 8H-chromeno [4,3-b] chromene-6,8-diones. Their structure was also confirmed by 1 H, 13C NMR, HSQC, HMBC spectroscopy.

Crystal structure of vardenafil hydrochloride trihydrate, C23H33N6O4SCl (H2O)3

2018 ◽  
Vol 33 (4) ◽  
pp. 319-326
Author(s):  
Austin M. Wheatley ◽  
James A. Kaduk ◽  
Amy M. Gindhart ◽  
Thomas N. Blanton
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Nitrogen Atom ◽  
Hydrogen Bonds ◽  
Powder Diffraction ◽  
Density Functional ◽  
Strong Hydrogen Bond ◽  
Water Molecules ◽  
Ring Nitrogen ◽  
Intramolecular Hydrogen

The crystal structure of vardenafil hydrochloride trihydrate has been solved and refined using synchrotron X-ray powder diffraction data, and optimized using density functional techniques. Vardenafil hydrochloride trihydrate crystallizes in space group C2/c (#15) with a = 34.78347(16), b = 11.56752(4), c = 14.69308(5) Å, β = 93.3410(4), V = 5901.839(30) Å3, and Z = 8. The fused ring system and the phenyl ring are nearly co-planar; the interplanar angle between them is 6.0°. Two intramolecular hydrogen bonds help determine this conformation. These planes stack along the c-axis. The side chains of these ring systems have a large Uiso and are neighbors in the stacks. Along the a-axis, these stacks are separated by hydrophilic layers of chloride, water molecules, and the positively charged nitrogen atoms of the vardenafil cation. Hydrogen bonds are prominent in the crystal structure. The protonated nitrogen atom forms a strong hydrogen bond to the chloride anion. The water molecules form a hexagon, making hydrogen bonds with themselves, as well as the C1 and a ring nitrogen atom. These discrete hydrogen bonds form a cluster, and there is no extended hydrogen bond network. There are many C–H⋯Cl, C–H⋯O, and C–H⋯N hydrogen bonds, which (although individually weak) contribute significantly to the crystal energy. The powder pattern is included in the Powder Diffraction File™ as entry 00-066-1620.

NUCLEAR SHIELDING PARAMETERS FOR PROTONS IN HYDROGEN BONDS: II. CORRELATION OF CHEMICAL SHIFTS IN INTRAMOLECULAR HYDROGEN BONDS WITH INFRARED STRETCHING FREQUENCIES

1960 ◽  
Vol 38 (8) ◽  
pp. 1249-1254 ◽  
Author(s):  
L. W. Reeves ◽  
E. A. Allan ◽  
K. O. Strømme
Keyword(s):  
Hydrogen Bond ◽  
Chemical Shift ◽  
Hydrogen Bonds ◽  
Infinite Dilution ◽  
Chemical Shifts ◽  
Intramolecular Hydrogen Bonds ◽  
A Value ◽  
Nuclear Shielding ◽  
Intramolecular Hydrogen ◽  
Hydrogen Bonded

Nuclear shielding parameters have been obtained for 24 intramolecularly hydrogen-bonded phenols and naphthols. The shielding parameters are corrected for large diamagnetic anisotropies and a value ΔσOH obtained which represents the change in shielding parameter in parts per million with reference to the infinite dilution chemical shift of phenol, α-naphthol, or β-naphthol. These values of ΔσOH are approximately proportional to the change ΔvOH in the OH stretching frequency on formation of the hydrogen bond.

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