Bilayer sheet protrusions and budding from bilayer membranes induced by hydrolysis and condensation reactions

Koh M. Nakagawa; Hiroshi Noguchi

doi:10.1039/c7sm02326j

Bilayer sheet protrusions and budding from bilayer membranes induced by hydrolysis and condensation reactions

Soft Matter ◽

10.1039/c7sm02326j ◽

2018 ◽

Vol 14 (8) ◽

pp. 1397-1407 ◽

Cited By ~ 3

Author(s):

Koh M. Nakagawa ◽

Hiroshi Noguchi

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Coarse Grained ◽

Bilayer Membranes ◽

Condensation Reactions ◽

Amphiphilic Molecules ◽

Hydrolysis And Condensation ◽

Shape Transformations ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

Shape transformations of flat bilayer membranes and vesicles induced by hydrolysis and condensation reactions of amphiphilic molecules are studied using coarse-grained molecular dynamics simulations.

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Pores in bilayer membranes of amphiphilic molecules: Coarse-grained molecular dynamics simulations compared with simple mesoscopic models

The Journal of Chemical Physics ◽

10.1063/1.1752884 ◽

2004 ◽

Vol 121 (4) ◽

pp. 1890-1900 ◽

Cited By ~ 30

Author(s):

C. Loison ◽

M. Mareschal ◽

F. Schmid

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Coarse Grained ◽

Bilayer Membranes ◽

Mesoscopic Models ◽

Amphiphilic Molecules ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Coarse-grained molecular dynamics simulations of shear-induced instabilities of lipid bilayer membranes in water

Physical Review E ◽

10.1103/physreve.82.051602 ◽

2010 ◽

Vol 82 (5) ◽

Cited By ~ 14

Author(s):

Itsuo Hanasaki ◽

Jens H. Walther ◽

Satoyuki Kawano ◽

Petros Koumoutsakos

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Lipid Bilayer ◽

Coarse Grained ◽

Lipid Bilayer Membranes ◽

Bilayer Membranes ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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On the dynamics of molecular self-assembly and the structural analysis of bilayer membranes using coarse-grained molecular dynamics simulations

Biochimica et Biophysica Acta (BBA) - Biomembranes ◽

10.1016/j.bbamem.2016.05.014 ◽

2016 ◽

Vol 1858 (9) ◽

pp. 1955-1963 ◽

Cited By ~ 7

Author(s):

Tanja Schindler ◽

Dietmar Kröner ◽

Martin O. Steinhauser

Keyword(s):

Molecular Dynamics ◽

Structural Analysis ◽

Molecular Dynamics Simulations ◽

Self Assembly ◽

Coarse Grained ◽

Bilayer Membranes ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Cylindrical to spherical shape transformations of micelles using all-atom and coarse-grained molecular dynamics simulations

10.1063/1.5122512 ◽

2019 ◽

Author(s):

Arpita Srivastava ◽

Ananya Debnath

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Spherical Shape ◽

Coarse Grained ◽

Shape Transformations ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Mechanical Properties of Surfactant Bilayer Membranes from Atomistic and Coarse-Grained Molecular Dynamics Simulations

The Journal of Physical Chemistry B ◽

10.1021/jp054372b ◽

2005 ◽

Vol 109 (42) ◽

pp. 19851-19858 ◽

Cited By ~ 27

Author(s):

E. S. Boek ◽

J. T. Padding ◽

W. K. den Otter ◽

W. J. Briels

Keyword(s):

Mechanical Properties ◽

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Coarse Grained ◽

Bilayer Membranes ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Understanding the mechanical and viscoelastic properties of graphene reinforced polycarbonate nanocomposites using coarse-grained molecular dynamics simulations

Computational Materials Science ◽

10.1016/j.commatsci.2021.110339 ◽

2021 ◽

Vol 191 ◽

pp. 110339

Author(s):

Jie Yang ◽

Daniel Custer ◽

Cho Chun Chiang ◽

Zhaoxu Meng ◽

X.H. Yao

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Viscoelastic Properties ◽

Coarse Grained ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Effect of simulation temperature on phospholipid bilayer–vesicle transition studied by coarse-grained molecular dynamics simulations

Soft Matter ◽

10.1039/c3sm51038g ◽

2013 ◽

Vol 9 (30) ◽

pp. 7294 ◽

Cited By ~ 20

Author(s):

Choon-Peng Chng

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Phospholipid Bilayer ◽

Coarse Grained ◽

Dynamics Simulations ◽

Bilayer Vesicle ◽

Coarse Grained Molecular Dynamics

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Coarse-Grained Molecular Dynamics Simulations of Cobra Cytotoxin A3 Interactions with a Lipid Bilayer: Penetration of Loops into Membranes

The Journal of Physical Chemistry B ◽

10.1021/jp107599v ◽

2011 ◽

Vol 115 (5) ◽

pp. 796-802 ◽

Cited By ~ 11

Author(s):

Zhi-Yuan Su ◽

Yeng-Tseng Wang

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Lipid Bilayer ◽

Coarse Grained ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Accurate Prediction of Forster Resonance Energy Transfer during Co-translational Folding with Coarse-Grained Molecular Dynamics Simulations

Biophysical Journal ◽

10.1016/j.bpj.2017.11.311 ◽

2018 ◽

Vol 114 (3) ◽

pp. 47a

Author(s):

Daniel A. Nissley ◽

Edward P. O'Brien

Keyword(s):

Molecular Dynamics ◽

Energy Transfer ◽

Molecular Dynamics Simulations ◽

Resonance Energy Transfer ◽

Resonance Energy ◽

Accurate Prediction ◽

Coarse Grained ◽

Förster Resonance Energy Transfer ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

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Adsorption-induced co-assembly of hairy and isotropic particles

Physical Chemistry Chemical Physics ◽

10.1039/c9cp06854f ◽

2020 ◽

Vol 22 (16) ◽

pp. 8757-8767

Author(s):

Tomasz Staszewski ◽

Małgorzata Borówko

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Coarse Grained ◽

Dynamics Simulations ◽

Coarse Grained Molecular Dynamics

We use coarse-grained molecular dynamics simulations to study the behavior of polymer-tethered particles immersed in fluids of isotropic particles.

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