An integrative omics perspective for the analysis of chemical signals in ecological interactions

2018 ◽  
Vol 47 (5) ◽  
pp. 1574-1591 ◽  
Author(s):  
A. E. Brunetti ◽  
F. Carnevale Neto ◽  
M. C. Vera ◽  
C. Taboada ◽  
D. P. Pavarini ◽  
...  

All living organisms emit, detect, and respond to chemical stimuli, thus creating an almost limitless number of interactions by means of chemical signals.

2019 ◽  
Vol 99 (5) ◽  
pp. 1165-1169 ◽  
Author(s):  
Monserrat Suárez-Rodríguez ◽  
Karla Kruesi ◽  
Guillermina Alcaraz

AbstractHermit crabs use different senses to search for and find shells. In most cases, chemical cues have been proven to act as a very efficient way of finding new shells. However, in intertidal environments, the water transports chemical signals in different directions and velocities may make it harder to track the source of the cue, so visual stimuli may be a more precise source of information. The hermit crab Calcinus californiensis shows a preference for the biconical shells of Stramonita biserialis, although the crabs may also use the less preferred shell of Nerita scabricosta. We were interested in exploring if C. californiensis identify the preferred shell species through vision in the absence of chemical stimuli. We presented both shell species to hermit crabs in two different sets of experiments. In one experiment, we presented to the hermit crabs real shells of N. scabricosta and S. biserialis, and in another, we presented only the silhouettes of the same shells. The hermit crabs discriminated between the real shells and the silhouettes of N. scabricosta and S. biserialis. Females attended with higher frequency to real shells and silhouettes of S. biserialis; while males attended more to shells and silhouettes of N. scabricosta. Although, larger males biased their attendance toward shells of S. biserialis. Our results show that visual perception may be more important than we have thought in intertidal animals.


2020 ◽  
Vol 6 (37) ◽  
pp. eaba9636 ◽  
Author(s):  
Masazumi Fujiwara ◽  
Simo Sun ◽  
Alexander Dohms ◽  
Yushi Nishimura ◽  
Ken Suto ◽  
...  

Real-time temperature monitoring inside living organisms provides a direct measure of their biological activities. However, it is challenging to reduce the size of biocompatible thermometers down to submicrometers, despite their potential applications for the thermal imaging of subtissue structures with single-cell resolution. Here, using quantum nanothermometers based on optically accessible electron spins in nanodiamonds, we demonstrate in vivo real-time temperature monitoring inside Caenorhabditis elegans worms. We developed a microscope system that integrates a quick-docking sample chamber, particle tracking, and an error correction filter for temperature monitoring of mobile nanodiamonds inside live adult worms with a precision of ±0.22°C. With this system, we determined temperature increases based on the worms’ thermogenic responses during the chemical stimuli of mitochondrial uncouplers. Our technique demonstrates the submicrometer localization of temperature information in living animals and direct identification of their pharmacological thermogenesis, which may allow for quantification of their biological activities based on temperature.


1973 ◽  
Vol 30 (7) ◽  
pp. 995-997 ◽  
Author(s):  
C. Newcombe ◽  
G. Hartman

In a two-choice maze ripe rainbow trout (Salmo gairdneri) of both sexes showed positive responses to chemical (probably olfactory) information. The possibility that visual or auditory stimuli influenced choice of channel in the maze was ruled out. Both males and females were strongly attracted to water taken from behind fish that were spawning and weakly attracted to the holding water of ripe fish that were not spawning. Brief speculation is offered about the role of chemical stimuli in the behavior of prespawning and spawning trout.


Acta Naturae ◽  
2020 ◽  
Vol 12 (3) ◽  
pp. 81-91
Author(s):  
E. L. Sokolinskaya ◽  
D. V. Kolesov ◽  
K. A. Lukyanov ◽  
A. M. Bogdanov

Chemoreception, an ability to perceive specific chemical stimuli, is one of the most evolutionarily ancient forms of interaction between living organisms and their environment. Chemoreception systems are found in organisms belonging to all biological kingdoms. In higher multicellular animals, chemoreception (along with photo- and mechanoreception) underlies the functioning of five traditional senses. Insects have developed a peculiar and one of the most sophisticated chemoreception systems, which exploits at least three receptor superfamilies providing perception of smell and taste, as well as chemical communication in these animals. The enormous diversity of physiologically relevant compounds in the environment has given rise to a wide-ranging repertoire of chemoreceptors of various specificities. Thus, in insects, they are represented by several structurally and functionally distinct protein classes and are encoded by hundreds of genes. In the current review, we briefly characterize the insect chemoreception system by describing the main groups of receptors that constitute it and putting emphasis on the peculiar architecture and mechanisms of functioning possessed by these molecules.


Ecology ◽  
2012 ◽  
Author(s):  
André Kessler

“Ours is a world of sights and sounds. We live by our eyes and ears and tend generally to be oblivious to the chemical happenings in our surrounds. Such happenings are ubiquitous. All organisms engender chemical signals, and all, in their respective ways, respond to the chemical emissions of others. The result is a vast communicative interplay, fundamental to the fabric of life” (Eisner and Meinwald 1995, p. v), cited under General Overviews). Chemical ecology is the study of ecological interactions between organisms mediated by chemicals produced by those organisms. Chemical interactions between organisms can be analyzed across all organizational levels, reaching from cell-cell interaction and intraspecific and multitrophic-level interactions to whole community interactions and environmental ecological processes. Because of their ubiquity, chemical signals that carry information (semiochemicals) can be categorized by the types of ecological interactions they mediate, such as intraspecific social communication, antagonistic interactions, and mutualism. Accordingly, this article is organized into three core areas, one formed by the chemicals mediating interactions between members of the same species (pheromones), and the others by interspecific interactions involving allomones (where the sender benefits), and synomones (where both sender and receivers benefit). A fourth group of signals, kairomones (where the receiver benefits), can comprise all other signal categories when they are perceived and utilized by a third organism that itself gains a benefit from eavesdropping on communication between others. While primary studies in chemical ecology focused on the identification of compounds mediating interactions between organisms, today’s debates are dominated by micro- and macroevolutionary aspects of chemical interactions. The very rapid growth of the chemical ecology literature over recent decades has been, in part, driven by the growing appreciation of the high economic value of understanding chemical communication, reaching from applications in pest management over the control of disease vectors in agriculture to the use of chemical signals in medicine. Moreover, the field has dramatically profited from innovations in analytical chemistry, making the separation of complex compound mixtures as well as the identification of compound structures efficient and accessible to a broader community of researchers. Recent advances in molecular ecology have aided an even more rapid mechanistic and functional analysis of semiochemicals, leading to a modern consolidation of different research fields. This collection of significant publications focuses on the functional and evolutionary analysis of chemical signals important in mediating ecological interactions. Moreover, attention has been given to publications that provide conceptual frameworks and are among the most highly cited in the respective subdisciplines. They can thus provide a good introduction for the interested reader and allow efficient forward and backward searching for more detailed information.


2000 ◽  
Vol 203 (4) ◽  
pp. 765-771 ◽  
Author(s):  
R.A. Zulandt Schneider ◽  
P.A. Moore

Chemical signals are an important aspect of ecological interactions in crustacean systems. Repellent chemical signals can be classified into three context-specific categories: chemicals released directly from a repellent stimulus (avoidance chemicals), chemicals released from damaged conspecifics (alarm chemicals) and chemicals released from stressed but undamaged conspecifics (stress chemicals). Our study examines the existence and putative source of the stress signals in crayfish. We hypothesize that Procambarus clarkii can recognize stressed individuals through chemical signals and also that the source of the signal that provides P. clarkii with information on the behavioral state of the sender is the urine. We collected urine and gill water from stressed and non-stressed animals, and chemicals from damaged conspecifics. Chemical cues were introduced into a test arena while several behavior patterns of P. clarkii were recorded. Stressed crayfish produce significantly more urine than non-stressed crayfish, and this urine caused crayfish to walk significantly faster and farther and away from the source of the signal. These results demonstrate that predator-stressed crayfish release urine that causes other crayfish to move away from the source of the signal. Responses to stress chemical signals may allow receiving organisms to avoid the fate of the signal sender.


1997 ◽  
Vol 161 ◽  
pp. 437-442
Author(s):  
Salvatore Di Bernardo ◽  
Romana Fato ◽  
Giorgio Lenaz

AbstractOne of the peculiar aspects of living systems is the production and conservation of energy. This aspect is provided by specialized organelles, such as the mitochondria and chloroplasts, in developed living organisms. In primordial systems lacking specialized enzymatic complexes the energy supply was probably bound to the generation and maintenance of an asymmetric distribution of charged molecules in compartmentalized systems. On the basis of experimental evidence, we suggest that lipophilic quinones were involved in the generation of this asymmetrical distribution of charges through vectorial redox reactions across lipid membranes.


2020 ◽  
Vol 9 (4) ◽  
pp. 40-43
Author(s):  
N. K. Yuldasheva ◽  
S. D. Gusakova ◽  
D. Kh. Nurullaeva ◽  
N. T. Farmanova ◽  
R. P. Zakirova ◽  
...  

Introduction. Lipids are a widespread group of biologically active substances in nature, making up the bulk of the organic substances of all living organisms. They accumulate in plants in seeds, as well as in fruits and perform a number of vital functions: they are the main components of cell membranes and the energy reserve for the body.Aim. Study of neutral lipids of sown oats (Avena sativa L.).Materials and methods. The objects of the study were fruits (grains) of oats of the sown variety "Tashkent 1," harvested in the Republic of Uzbekistan. Results and discussions. Neutral lipids of oat grains have been found to contain 13 fatty acids with a predominance of the sum of oleic, linolenic and linoleic acids. The total degree of unsaturation was almost 78%. Absorption bands characteristic of these substances were observed in the IR spectrum of MEGC.Conclusion. According to the results of the NL analysis, oat grains consisted of triacylglycerides and free LCDs, which were accompanied by hydrocarbons, phytosterols, triterpenoids and tocopherols.


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