Recent advances in microRNA detection

The Analyst ◽  
2018 ◽  
Vol 143 (8) ◽  
pp. 1758-1774 ◽  
Author(s):  
Yongqiang Cheng ◽  
Lijuan Dong ◽  
Jiangyan Zhang ◽  
Yaqing Zhao ◽  
Zhengping Li

Recent advances in miRNA detection methods and new applications.

2015 ◽  
Vol 13 (8) ◽  
pp. 2226-2238 ◽  
Author(s):  
Tian Tian ◽  
Jiaqi Wang ◽  
Xiang Zhou

MicroRNA (miRNA) detection is of considerable significance in both disease diagnosis and in the study of miRNA function.


2006 ◽  
Vol 2006 ◽  
pp. 1-10 ◽  
Author(s):  
Gard O. S. Thomassen ◽  
Øystein Røsok ◽  
Torbjørn Rognes

We present an overview of selected computational methods for microRNA prediction. It is especially aimed at viral miRNA detection. As the number of microRNAs increases and the range of genomes encoding miRNAs expands, it seems that these small regulators have a more important role than has been previously thought. Most microRNAs have been detected by cloning and Northern blotting, but experimental methods are biased towards abundant microRNAs as well as being time-consuming. Computational detection methods must therefore be refined to serve as a faster, better, and more affordable method for microRNA detection. We also present data from a small study investigating the problems of computational miRNA prediction. Our findings suggest that the prediction of microRNA precursor candidates is fairly easy, while excluding false positives as well as exact prediction of the mature microRNA is hard. Finally, we discuss possible improvements to computational microRNA detection.


Sensors ◽  
2021 ◽  
Vol 21 (12) ◽  
pp. 3985
Author(s):  
Nan Wan ◽  
Yu Jiang ◽  
Jiamei Huang ◽  
Rania Oueslati ◽  
Shigetoshi Eda ◽  
...  

A sensitive and efficient method for microRNAs (miRNAs) detection is strongly desired by clinicians and, in recent years, the search for such a method has drawn much attention. There has been significant interest in using miRNA as biomarkers for multiple diseases and conditions in clinical diagnostics. Presently, most miRNA detection methods suffer from drawbacks, e.g., low sensitivity, long assay time, expensive equipment, trained personnel, or unsuitability for point-of-care. New methodologies are needed to overcome these limitations to allow rapid, sensitive, low-cost, easy-to-use, and portable methods for miRNA detection at the point of care. In this work, to overcome these shortcomings, we integrated capacitive sensing and alternating current electrokinetic effects to detect specific miRNA-16b molecules, as a model, with the limit of detection reaching 1.0 femto molar (fM) levels. The specificity of the sensor was verified by testing miRNA-25, which has the same length as miRNA-16b. The sensor we developed demonstrated significant improvements in sensitivity, response time and cost over other miRNA detection methods, and has application potential at point-of-care.


2021 ◽  
Vol 50 (6) ◽  
pp. 4141-4161
Author(s):  
Thomas Jet ◽  
Guillaume Gines ◽  
Yannick Rondelez ◽  
Valérie Taly

Multiplex miRNA detection is a promising way to non-invasive diagnostics. In this review, we discuss the recent advances to the multiplexing of miRNA quantification.


2018 ◽  
Vol 68 (3) ◽  
pp. 299-305 ◽  
Author(s):  
Yi Liu ◽  
Han Zhang ◽  
Harshit Porwal ◽  
James JC Busfield ◽  
Ton Peijs ◽  
...  

ChemInform ◽  
2015 ◽  
Vol 46 (15) ◽  
pp. no-no
Author(s):  
Tian Tian ◽  
Jiaqi Wang ◽  
Xiang Zhou

Molecules ◽  
2020 ◽  
Vol 25 (6) ◽  
pp. 1296 ◽  
Author(s):  
Enrico Cadoni ◽  
Alex Manicardi ◽  
Annemieke Madder

MicroRNAs (miRNAs or miRs) are small noncoding RNAs involved in the fine regulation of post-transcriptional processes in the cell. The physiological levels of these short (20–22-mer) oligonucleotides are important for the homeostasis of the organism, and therefore dysregulation can lead to the onset of cancer and other pathologies. Their importance as biomarkers is constantly growing and, in this context, detection methods based on the hybridization to peptide nucleic acids (PNAs) are gaining their place in the spotlight. After a brief overview of their biogenesis, this review will discuss the significance of targeting miR, providing a wide range of PNA-based approaches to detect them at biologically significant concentrations, based on electrochemical, fluorescence and colorimetric assays.


Biosensors ◽  
2020 ◽  
Vol 10 (12) ◽  
pp. 193
Author(s):  
Alanna V. Zubler ◽  
Jeong-Yeol Yoon

Plant stresses have been monitored using the imaging or spectrometry of plant leaves in the visible (red-green-blue or RGB), near-infrared (NIR), infrared (IR), and ultraviolet (UV) wavebands, often augmented by fluorescence imaging or fluorescence spectrometry. Imaging at multiple specific wavelengths (multi-spectral imaging) or across a wide range of wavelengths (hyperspectral imaging) can provide exceptional information on plant stress and subsequent diseases. Digital cameras, thermal cameras, and optical filters have become available at a low cost in recent years, while hyperspectral cameras have become increasingly more compact and portable. Furthermore, smartphone cameras have dramatically improved in quality, making them a viable option for rapid, on-site stress detection. Due to these developments in imaging technology, plant stresses can be monitored more easily using handheld and field-deployable methods. Recent advances in machine learning algorithms have allowed for images and spectra to be analyzed and classified in a fully automated and reproducible manner, without the need for complicated image or spectrum analysis methods. This review will highlight recent advances in portable (including smartphone-based) detection methods for biotic and abiotic stresses, discuss data processing and machine learning techniques that can produce results for stress identification and classification, and suggest future directions towards the successful translation of these methods into practical use.


2015 ◽  
Vol 7 (6) ◽  
pp. 2258-2263 ◽  
Author(s):  
Hui-Ling Chen ◽  
Meng-Meng Guo ◽  
Hao Tang ◽  
Zhan Wu ◽  
Li-Juan Tang ◽  
...  

This review traces the basic principles of several nucleic acid amplification-based microRNA detection methods that have been developed in recent three years.


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