Strategies to create hierarchical self-assembled structures via cooperative non-covalent interactions

2015 ◽  
Vol 44 (8) ◽  
pp. 2543-2572 ◽  
Author(s):  
Christina Rest ◽  
Ramesh Kandanelli ◽  
Gustavo Fernández
Keyword(s):  
Self Assembly ◽  
Supramolecular Polymers ◽  
Supramolecular Systems ◽  
Multiple Systems ◽  
Cooperative Phenomena ◽  
Non Covalent Interactions ◽  
Self Assembled ◽  
High Degree ◽  
Covalent Interactions ◽  
Degree Of Order

Cooperative phenomena exhibit the basis for the hierarchical self-assembly of multiple systems in nature. Motivated by the high degree of order in these structures, a large number of supramolecular polymers have been designed whose aggregation follows a cooperative pathway. Herein, we have classified the supramolecular systems depending on the cooperative non-covalent forces driving their formation.

scholarly journals Reorganization of Self-Assembled DNA-Based Polymers Using Orthogonally Addressable Building Blocks

2021 ◽  
Author(s):  
Serena Gentile ◽  
Erica Del Grosso ◽  
Leonard J. Prins ◽  
Francesco Ricci
Keyword(s):  
Self Assembly ◽  
Rational Design ◽  
Building Blocks ◽  
Binding Domain ◽  
Non Covalent Interactions ◽  
Sticky Ends ◽  
Self Assembled ◽  
Block Structures ◽  
Covalent Interactions

Taking advantage of the addressability and programmability of DNA/DNA non-covalent interactions we report here the rational design of orthogonal DNA-based addressable tiles that self-assemble into polymer-like structures that can be reconfigured and reorganized by external inputs. The different tiles share the same 5-nucleotide sticky ends responsible for self-assembly but are rationally designed to contain a specific regulator-binding domain that can be orthogonally targeted by different DNA regulator strands (activators and inhibitors). We show that by sequentially adding specific activators and inhibitors it is possible to re-organize in a dynamic and reversible way the formed polymer-like structures to display well-defined distributions: homopolymers made of a single tile, random polymers in which different tiles are distributed randomly and block structures in which the tiles are organized in segments.

scholarly journals Art, auto-mechanics, and supramolecular chemistry. A merging of hobbies and career

2016 ◽  
Vol 12 ◽  
pp. 362-376 ◽  
Author(s):  
Eric V Anslyn
Keyword(s):  
Supramolecular Chemistry ◽  
Self Assembly ◽  
Molecular Orbital Theory ◽  
High Complexity ◽  
Orbital Theory ◽  
Non Covalent Interactions ◽  
Definition Of ◽  
High Degree ◽  
Covalent Interactions ◽  
Strict Definition

While the strict definition of supramolecular chemistry is “chemistry beyond the molecule”, meaning having a focus on non-covalent interactions, the field is primarily associated with the creation of synthetic receptors and self-assembly. For synthetic ease, the receptors and assemblies routinely possess a high degree of symmetry, which lends them an aspect of aesthetic beauty. Pictures of electron orbitals similarly can be seen as akin to works of art. This similarity was an early draw for me to the fields of supramolecular chemistry and molecular orbital theory, because I grew up in a household filled with art. In addition to art, my childhood was filled with repairing and constructing mechanical entities, such as internal combustion motors, where many components work together to achieve a function. Analogously, the field of supramolecular chemistry creates systems of high complexity that achieve functions or perform tasks. Therefore, in retrospect a career in supramolecular chemistry appears to be simply an extension of childhood hobbies involving art and auto-mechanics.

scholarly journals Xanthene[n]arenes: Exceptionally Large, Bowl-shaped Macrocyclic Building Blocks Suitable for Self-Assembly

2021 ◽  
Author(s):  
Jonathan Pfeuffer-Rooschüz ◽  
Alessandro Prescimone ◽  
Konrad Tiefenbacher
Keyword(s):  
Self Assembly ◽  
Building Blocks ◽  
The Novel ◽  
Supramolecular Systems ◽  
Binding Properties ◽  
Molecular Capsules ◽  
New Class ◽  
Guest Binding ◽  
Non Covalent Interactions ◽  
Covalent Interactions

<div>A new class of macrocycles denoted as “xanthene[n]arenes” was synthesized. In contrast to most other macrocycles, they feature a rigid bowl-shape, required for the synthesis of cavitands and for the self-assembly to molecular capsules via non-covalent interactions. The derivatization potential of the novel macrocycles was demonstrated on the xanthene[3]arene scaffold. Beside a deep cavitand, a modified macrocycle was synthesized that self-assembles into a hydrogen-bonded tetrameric capsule. Both supramolecular systems display host-guest binding properties, demonstrating the potential of xanthene[n]arenes as a new set of macrocyclic building blocks.</div>

scholarly journals Reorganization of Self-Assembled DNA-Based Polymers Using Orthogonally Addressable Building Blocks

2021 ◽  
Author(s):  
Serena Gentile ◽  
Erica Del Grosso ◽  
Leonard J. Prins ◽  
Francesco Ricci
Keyword(s):  
Self Assembly ◽  
Rational Design ◽  
Building Blocks ◽  
Binding Domain ◽  
Non Covalent Interactions ◽  
Sticky Ends ◽  
Self Assembled ◽  
Block Structures ◽  
Covalent Interactions

Taking advantage of the addressability and programmability of DNA/DNA non-covalent interactions we report here the rational design of orthogonal DNA-based addressable tiles that self-assemble into polymer-like structures that can be reconfigured and reorganized by external inputs. The different tiles share the same 5-nucleotide sticky ends responsible for self-assembly but are rationally designed to contain a specific regulator-binding domain that can be orthogonally targeted by different DNA regulator strands (activators and inhibitors). We show that by sequentially adding specific activators and inhibitors it is possible to re-organize in a dynamic and reversible way the formed polymer-like structures to display well-defined distributions: homopolymers made of a single tile, random polymers in which different tiles are distributed randomly and block structures in which the tiles are organized in segments.

scholarly journals Tuning Energy Landscapes and Metal-Metal Interactions in Supramolecular Polymers regulated by Coordination Geometry

2021 ◽  
Author(s):  
Nils Bäumer ◽  
Krishnan Kartha Kalathil ◽  
Stefan Buss ◽  
Ivan Maisuls ◽  
Jasnamol P. Palakkal ◽  
...  
Keyword(s):  
Photophysical Properties ◽  
Energy Landscape ◽  
Supramolecular Polymers ◽  
Coordination Geometry ◽  
Energy Landscapes ◽  
Metal Interactions ◽  
Metal Metal ◽  
Non Covalent Interactions ◽  
Self Assembled ◽  
Covalent Interactions

Herein, we exploit coordination geometry as a new tool to regulate the non-covalent interactions, photophysical properties and energy landscape of supramolecular polymers. To this end, we have designed two self-assembled...

scholarly journals Non-covalent interactions in controlling pH-responsive behaviors of self-assembled nanosystems

2016 ◽  
Vol 7 (38) ◽  
pp. 5949-5956 ◽  
Author(s):  
Yang Li ◽  
Zhaohui Wang ◽  
Qi Wei ◽  
Min Luo ◽  
Gang Huang ◽  
...  
Keyword(s):  
Protein Folding ◽  
Self Assembly ◽  
Ph Responsive ◽  
Protein Biochemistry ◽  
Biological Signals ◽  
Non Covalent Interactions ◽  
Self Assembled ◽  
Covalent Interactions

Self-assembly and associated dynamic and reversible non-covalent interactions are the basis of protein biochemistry (e.g., protein folding) and the development of sophisticated nanomaterial systems that can respond to and amplify biological signals.

scholarly journals Xanthene[n]arenes: Exceptionally Large, Bowl-shaped Macrocyclic Building Blocks Suitable for Self-Assembly

2021 ◽  
Author(s):  
Jonathan Pfeuffer-Rooschüz ◽  
Alessandro Prescimone ◽  
Konrad Tiefenbacher
Keyword(s):  
Self Assembly ◽  
Building Blocks ◽  
The Novel ◽  
Supramolecular Systems ◽  
Binding Properties ◽  
Molecular Capsules ◽  
New Class ◽  
Guest Binding ◽  
Non Covalent Interactions ◽  
Covalent Interactions

<div>A new class of macrocycles denoted as “xanthene[n]arenes” was synthesized. In contrast to most other macrocycles, they feature a rigid bowl-shape, required for the synthesis of cavitands and for the self-assembly to molecular capsules via non-covalent interactions. The derivatization potential of the novel macrocycles was demonstrated on the xanthene[3]arene scaffold. Beside a deep cavitand, a modified macrocycle was synthesized that self-assembles into a hydrogen-bonded tetrameric capsule. Both supramolecular systems display host-guest binding properties, demonstrating the potential of xanthene[n]arenes as a new set of macrocyclic building blocks.</div>

Tetranuclear copper(ii) cubane complexes derived from self-assembled 1,3-dimethyl-5-(o-phenolate-azo)-6-aminouracil: structures, non-covalent interactions and magnetic property

2021 ◽  
Vol 45 (5) ◽  
pp. 2742-2753
Author(s):  
Nishithendu Bikash Nandi ◽  
Atanu Purkayastha ◽  
Shaktibrata Roy ◽  
Julia Kłak ◽  
Rakesh Ganguly ◽  
...  
Keyword(s):  
Magnetic Property ◽  
Exchange Coupling ◽  
Antiferromagnetic Exchange ◽  
Non Covalent Interactions ◽  
Cubane Cluster ◽  
Self Assembled ◽  
Covalent Interactions

A new doubly opened 4 + 2 Cu4O4 cubane cluster exhibits strong antiferromagnetic exchange coupling with J1 = −110.1 cm−1, and J2 = −27.1 cm−1.

Self-assembly mode and supramolecular framework of cyclopentanocucurbit[6]uril and aromatic amines

2021 ◽  
Vol 25 ◽  
Author(s):  
Jun Zheng ◽  
Yan Mei Jin ◽  
Xi Nan Yang ◽  
Lin Zhang ◽  
Dao Fa Jiang ◽  
...  
Keyword(s):  
Self Assembly ◽  
Functional Materials ◽  
Supramolecular Interactions ◽  
X Ray Diffraction ◽  
Guest Molecules ◽  
Characterization Methods ◽  
Potential Applications ◽  
Non Covalent Interactions ◽  
Multi Level ◽  
Covalent Interactions

: Single-crystal X-ray diffraction analysis, nuclear magnetic resonance (NMR), and other characterization methods are used to characterize the complexes formed by cyclopentano-cucurbit[6]uril (abbreviated as CyP6Q[6]) as a host interacting with p-aminobenzenesulfonamide (G1), 4,4'-diaminobiphenyl (G2), and (E)-4,4'-diamino-1,2-diphenylethene (G3) as guests, respectively. The experimental results show that these three aromatic amine molecules have the same interaction mode with CyP6Q[6], interacting with its negatively electric potential portals. The supramolecular interactions include non-covalent interactions of hydrogen bonding and ion-dipole between host and guest molecules. CdCl2 acts as a structureinducing agent to form self-assemblies of multi-dimensional and multi-level supramolecular frameworks that may have potential applications in various functional materials.

Sign in / Sign up

Export Citation Format

Share Document