A CAPS-based binding assay provides semi-quantitative validation of protein-DNA interactions

Yongyao Xie; Yaling Zhang; Xiucai Zhao; Yao-Guang Liu; Letian Chen

doi:10.1038/srep21030

A CAPS-based binding assay provides semi-quantitative validation of protein-DNA interactions

Scientific Reports ◽

10.1038/srep21030 ◽

2016 ◽

Vol 6 (1) ◽

Cited By ~ 2

Author(s):

Yongyao Xie ◽

Yaling Zhang ◽

Xiucai Zhao ◽

Yao-Guang Liu ◽

Letian Chen

Keyword(s):

Binding Assay ◽

Dna Interactions ◽

Protein Dna Interactions ◽

Quantitative Validation

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Dynamic and Structural Modeling of the Specificity in Protein–DNA Interactions Guided by Binding Assay and Structure Data

Journal of Chemical Theory and Computation ◽

10.1021/acs.jctc.8b00299 ◽

2018 ◽

Vol 14 (7) ◽

pp. 3877-3889 ◽

Cited By ~ 9

Author(s):

Cheng Tan ◽

Shoji Takada

Keyword(s):

Structure Data ◽

Binding Assay ◽

Structural Modeling ◽

Dna Interactions ◽

Protein Dna Interactions

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A New Analytical Scale DNA Affinity Binding Assay for Analyses of Specific Protein–DNA Interactions

Analytical Biochemistry ◽

10.1006/abio.2001.5433 ◽

2001 ◽

Vol 299 (2) ◽

pp. 203-210 ◽

Cited By ~ 10

Author(s):

N. Vinay Kumar ◽

Lori R. Bernstein

Keyword(s):

Binding Assay ◽

Specific Protein ◽

Affinity Binding ◽

Dna Interactions ◽

Protein Dna Interactions ◽

Analytical Scale

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A polyplex qPCR-based binding assay for protein–DNA interactions

The Analyst ◽

10.1039/c2an35703h ◽

2012 ◽

Vol 137 (18) ◽

pp. 4111 ◽

Cited By ~ 7

Author(s):

Morgane J. J. Moreau ◽

Patrick M. Schaeffer

Keyword(s):

Binding Assay ◽

Dna Interactions ◽

Protein Dna Interactions

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A tale of two measurements: protein-DNA interactions and gene expression in single cells.

10.33540/343 ◽

2020 ◽

Author(s):

◽

Corina Maria Markodimitraki

Keyword(s):

Gene Expression ◽

Single Cells ◽

Dna Interactions ◽

Protein Dna Interactions

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Identification of interface residues involved in protein-protein and protein-DNA interactions from sequence using machine learning approaches

10.31274/rtd-180813-2240 ◽

2005 ◽

Author(s):

Changhui Yan

Keyword(s):

Machine Learning ◽

Learning Approaches ◽

Dna Interactions ◽

Protein Dna Interactions ◽

Interface Residues

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Faculty Opinions recommendation of Genome-wide mapping of in vivo protein-DNA interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1087772.553829 ◽

2008 ◽

Author(s):

Magdalena Zernicka-Goetz

Keyword(s):

Dna Interactions ◽

Genome Wide ◽

Protein Dna Interactions

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Faculty Opinions recommendation of Genome-wide mapping of in vivo protein-DNA interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1087772.541949 ◽

2007 ◽

Author(s):

Ulf Pettersson

Keyword(s):

Dna Interactions ◽

Genome Wide ◽

Protein Dna Interactions

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Faculty Opinions recommendation of Genome-wide mapping of in vivo protein-DNA interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1087772.540596 ◽

2007 ◽

Author(s):

Deyou Zheng

Keyword(s):

Dna Interactions ◽

Genome Wide ◽

Protein Dna Interactions

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Faculty Opinions recommendation of Genome-wide mapping of in vivo protein-DNA interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1087772.540244 ◽

2007 ◽

Author(s):

John Jaenike

Keyword(s):

Dna Interactions ◽

Genome Wide ◽

Protein Dna Interactions

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Faculty Opinions recommendation of Global mapping of protein-DNA interactions in vivo by digital genomic footprinting.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1157755.618976 ◽

2009 ◽

Author(s):

Fyodor Urnov

Keyword(s):

Dna Interactions ◽

Protein Dna Interactions ◽

Global Mapping ◽

Genomic Footprinting

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