Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques

Rudolf Amann; Bernhard M. Fuchs

doi:10.1038/nrmicro1888

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques

Nature Reviews Microbiology ◽

10.1038/nrmicro1888 ◽

2008 ◽

Vol 6 (5) ◽

pp. 339-348 ◽

Cited By ~ 478

Author(s):

Rudolf Amann ◽

Bernhard M. Fuchs

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Microbial Communities ◽

Single Cell ◽

Cell Identification

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Single Cell Identification by Fluorescence In Situ Hybridization

Methods for General and Molecular Microbiology, Third Edition ◽

10.1128/9781555817497.ch39 ◽

2014 ◽

pp. 886-896 ◽

Cited By ~ 3

Author(s):

Bernhard M. Fuchs ◽

Jakob Pernthaler ◽

Rudolf Amann

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Cell Identification

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Faculty Opinions recommendation of Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1104464.560495 ◽

2008 ◽

Author(s):

Michael Wagner

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Metabolic Activity ◽

Single Cell Level ◽

Cell Level ◽

Catalyzed Reporter Deposition

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Microfluidic extraction and stretching of chromosomal DNA from single cell nuclei for DNA fluorescence in situ hybridization

Biomedical Microdevices ◽

10.1007/s10544-011-9621-8 ◽

2012 ◽

Vol 14 (3) ◽

pp. 443-451 ◽

Cited By ~ 10

Author(s):

Xiaozhu Wang ◽

Shin-ichiro Takebayashi ◽

Evans Bernardin ◽

David M. Gilbert ◽

Ravindran Chella ◽

...

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Cell Nuclei ◽

Chromosomal Dna

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Interphase fluorescence in situ hybridization in multiple myeloma and monoclonal gammopathy of undetermined significance without and with positive plasma cell identification: analysis of 192 cases from the Region of Southern Denmark

Cancer Genetics and Cytogenetics ◽

10.1016/j.cancergencyto.2006.11.015 ◽

2007 ◽

Vol 174 (2) ◽

pp. 89-99 ◽

Cited By ~ 20

Author(s):

Jacob H. Christensen ◽

Niels Abildgaard ◽

Torben Plesner ◽

Anne Nibe ◽

Ole Nielsen ◽

...

Keyword(s):

Multiple Myeloma ◽

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Plasma Cell ◽

Monoclonal Gammopathy ◽

Cell Identification ◽

Identification Analysis ◽

Undetermined Significance

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Joint Clustering of Single-Cell Sequencing and Fluorescence In Situ Hybridization Data for Reconstructing Clonal Heterogeneity in Cancers

Journal of Computational Biology ◽

10.1089/cmb.2021.0255 ◽

2021 ◽

Author(s):

Xuecong Fu ◽

Haoyun Lei ◽

Yifeng Tao ◽

Kerstin Heselmeyer-haddad ◽

Irianna Torres ◽

...

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Clonal Heterogeneity ◽

Single Cell Sequencing ◽

Hybridization Data

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Single-Cell Gene Expression Profiling: Cell-Level Biology by Multiplexed Expression Fluorescence in Situ Hybridization

10.1007/springerreference_33686 ◽

2011 ◽

Keyword(s):

Gene Expression ◽

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Gene Expression Profiling ◽

Expression Profiling ◽

Cell Level ◽

Cell Gene Expression ◽

Cell Gene

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Identification of denitrifying bacteria through single cell analysis with simultaneous detection of nirK gene and rRNA by using two-pass tyramide signal amplification fluorescence in situ hybridization

Journal of Japan Society of Civil Engineers Ser G (Environmental Research) ◽

10.2208/jscejer.69.iii_531 ◽

2013 ◽

Vol 69 (7) ◽

pp. III_531-III_538

Author(s):

Ryuji TAKAHASHI ◽

Nobuo ARAKI ◽

Shuji KAWAKAMI ◽

Masataka AOKI ◽

Takashi YAMAGUCHI

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Signal Amplification ◽

Single Cell Analysis ◽

Simultaneous Detection ◽

Cell Analysis ◽

Tyramide Signal Amplification ◽

Nirk Gene

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Which compartments are involved in Philadelphia‐chromosome positive chronic myeloid leukaemia? An answer at the single cell level by combining May‐Grünwald‐Giemsa staining and fluorescence in situ hybridization techniques

British Journal of Haematology ◽

10.1046/j.1365-2141.1997.9662656.x ◽

1997 ◽

Vol 97 (1) ◽

pp. 99-106 ◽

Cited By ~ 36

Author(s):

Torsten Haferlach ◽

Martin Winkemann ◽

Christina Nickenig ◽

Marlies Meeder ◽

Lotte Ramm‐Petersen ◽

...

Keyword(s):

In Situ Hybridization ◽

Chronic Myeloid Leukaemia ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Myeloid Leukaemia ◽

Philadelphia Chromosome ◽

Giemsa Staining ◽

Single Cell Level ◽

Cell Level

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Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function

Environmental Microbiology ◽

10.1111/j.1462-2920.2007.01352.x ◽

2007 ◽

Vol 9 (8) ◽

pp. 1878-1889 ◽

Cited By ~ 213

Author(s):

Wei E. Huang ◽

Kilian Stoecker ◽

Robert Griffiths ◽

Lyndsay Newbold ◽

Holger Daims ◽

...

Keyword(s):

Raman Spectroscopy ◽

In Situ Hybridization ◽

Stable Isotope ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Single Cell Analysis ◽

Cell Analysis ◽

And Function

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Faculty Opinions recommendation of Linking microbial phylogeny to metabolic activity at the single-cell level by using enhanced element labeling-catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1104464.560607 ◽

2008 ◽

Author(s):

Robert Palmer

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Single Cell ◽

Metabolic Activity ◽

Single Cell Level ◽

Cell Level ◽

Catalyzed Reporter Deposition

Download Full-text