scholarly journals Predicting non-small cell lung cancer prognosis by fully automated microscopic pathology image features

2016 ◽  
Vol 7 (1) ◽  
Author(s):  
Kun-Hsing Yu ◽  
Ce Zhang ◽  
Gerald J. Berry ◽  
Russ B. Altman ◽  
Christopher Ré ◽  
...  
2019 ◽  
Vol 65 (1) ◽  
pp. 89 ◽  
Author(s):  
Ting Gong ◽  
Jun Liu ◽  
Jun Jiang ◽  
Yi-Fan Zhai ◽  
Chun-Min Wu ◽  
...  

Open Medicine ◽  
2014 ◽  
Vol 9 (3) ◽  
pp. 382-390
Author(s):  
Diana Schveigert ◽  
Saulius Cicenas ◽  
Jaroslav Bublevic ◽  
Renatas Askinis ◽  
Virginijus Sapoka ◽  
...  

AbstractThe development of non-small-cell lung cancer (NSCLC) is a multistep process, which is triggered and maintained by various factors. Many steps of non-small-cell lung carcinogenesis, risk factors and biomarkers have been identified; however no consistent model has been established of personalized medicine for these patients. Distinct various gene expression, products of mutated genes and other markers such as circulating nucleic acids or tumor cells has been proven to be potential biomarkers of non-small cell lung cancer as well as potential targets for new treatment strategies. This article will highlight promising biomarkers in non-small cell lung cancer prognosis.


Tumor Biology ◽  
2014 ◽  
Vol 35 (7) ◽  
pp. 7155-7162 ◽  
Author(s):  
Xinwen Zhong ◽  
Xiaojiao Guan ◽  
Qianze Dong ◽  
Shize Yang ◽  
Wenke Liu ◽  
...  

2021 ◽  
Vol 8 ◽  
Author(s):  
Zhenyu Zhao ◽  
Qidong Cai ◽  
Pengfei Zhang ◽  
Boxue He ◽  
Xiong Peng ◽  
...  

Aberrant N6-methyladenosine (m6A) RNA methylation regulatory genes and related gene alternative splicing (AS) could be used to predict the prognosis of non–small cell lung carcinoma. This study focused on 13 m6A regulatory genes (METTL3, METTL14, WTAP, KIAA1429, RBM15, ZC3H13, YTHDC1, YTHDC2, YTHDF1, YTHDF2, HNRNPC, FTO, and ALKBH5) and expression profiles in TCGA-LUAD (n = 504) and TCGA-LUSC (n = 479) datasets from the Cancer Genome Atlas database. The data were downloaded and bioinformatically and statistically analyzed, including the gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses. There were 43,948 mRNA splicing events in lung adenocarcinoma (LUAD) and 46,020 in lung squamous cell carcinoma (LUSC), and the data suggested that m6A regulators could regulate mRNA splicing. Differential HNRNPC and RBM15 expression was associated with overall survival (OS) of LUAD and HNRNPC and METTL3 expression with the OS of LUSC patients. Furthermore, the non–small cell lung cancer prognosis-related AS events signature was constructed and divided patients into high- vs. low-risk groups using seven and 14 AS genes in LUAD and LUSC, respectively. The LUAD risk signature was associated with gender and T, N, and TNM stages, but the LUSC risk signature was not associated with any clinical features. In addition, the risk signature and TNM stage were independent prognostic predictors in LUAD and the risk signature and T stage were independent prognostic predictors in LUSC after the multivariate Cox regression and receiver operating characteristic analyses. In conclusion, this study revealed the AS prognostic signature in the prediction of LUAD and LUSC prognosis.


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