Phytoplankton Responses To Vertical Tidal Mixing

Author(s):  
S. Demers ◽  
L. Legendre ◽  
J.-C. Therriault
Keyword(s):  
2015 ◽  
Vol 106 ◽  
pp. 136-153 ◽  
Author(s):  
Ariane Koch-Larrouy ◽  
Agus Atmadipoera ◽  
Pieter van Beek ◽  
Gurvan Madec ◽  
Jérôme Aucan ◽  
...  

Ocean Science ◽  
2012 ◽  
Vol 8 (2) ◽  
pp. 143-159 ◽  
Author(s):  
S. Cailleau ◽  
J. Chanut ◽  
J.-M. Lellouche ◽  
B. Levier ◽  
C. Maraldi ◽  
...  

Abstract. The regional ocean operational system remains a key element in downscaling from large scale (global or basin scale) systems to coastal ones. It enables the transition between systems in which the resolution and the resolved physics are quite different. Indeed, coastal applications need a system to predict local high frequency events (inferior to the day) such as storm surges, while deep sea applications need a system to predict large scale lower frequency ocean features. In the framework of the ECOOP project, a regional system for the Iberia-Biscay-Ireland area has been upgraded from an existing V0 version to a V2. This paper focuses on the improvements from the V1 system, for which the physics are close to a large scale basin system, to the V2 for which the physics are more adapted to shelf and coastal issues. Strong developments such as higher regional physics resolution in the NEMO Ocean General Circulation Model for tides, non linear free surface and adapted vertical mixing schemes among others have been implemented in the V2 version. Thus, regional thermal fronts due to tidal mixing now appear in the latest version solution and are quite well positioned. Moreover, simulation of the stratification in shelf areas is also improved in the V2.


1982 ◽  
Vol 39 (8) ◽  
pp. 1150-1163 ◽  
Author(s):  
L. Fortier ◽  
W. C. Leggett

We studied the regulation of ichthyoplankton dispersion in the two-layer circulation of the St. Lawrence upper estuary by determining larval abundance and vertical distribution during high frequency sampling at three stations in May, June, and July, 1979. Monthly variations in capelin (Mallotus villosus) and Atlantic herring (Clupea harengus harengus) abundance were in agreement with the seasonal trends previously reported. Capelin larvae were concentrated in the surface layer, a situation which resulted in seaward drift. No significant growth was observed over the 60-d sampling period indicating continuous recruitment to, and removal from, the sampling area. Herring larvae were concentrated in the deep layer and were carried landward. The average size of herring larvae increased from the downstream to the upstream stations. Short-term fluctuations in the abundance and vertical distribution of the two species were interpreted in terms of the Fickian representation of transport for partially mixed estuaries. The major source of variation in abundance, at a given station, was the tidal advection of horizontal gradients. Capelin larvae and herring larvae smaller than 10 mm did not actively cross the pycnocline and were not submitted to the diffusive effect of the vertical current shear. The dispersal of these larvae was apparently passive. Herring larvae larger than 10 mm performed diel vertical migrations across the pycnocline and were dispersed in the horizontal plane at a faster rate than a passive contaminant of the environment. We conclude that the Fickian approach can be profitably applied to studies of dispersal and mortality of early larval stages of fish in estuaries.Key words: ichthyoplankton, St. Lawrence estuary, dispersion, transport, vertical distribution, diel migrations, variability, abundance, tidal mixing, Fickian


2020 ◽  
Author(s):  
Casimir de Lavergne ◽  
Clément Vic ◽  
Gurvan Madec ◽  
Fabien Roquet ◽  
Amy Waterhouse ◽  
...  

<p>Vertical mixing is often regarded as the Achilles’ heel of ocean models. In particular, few models include a comprehensive and energy-constrained parameterization of mixing by internal ocean tides. Here, we present an energy-conserving mixing scheme which accounts for the local breaking of high-mode internal tides and the distant dissipation of low-mode internal tides. The scheme relies on four static two-dimensional maps of internal tide dissipation, constructed using mode-by-mode Lagrangian tracking of energy beams from sources to sinks. Each map is associated with a distinct dissipative process and a corresponding vertical structure. Applied to an observational climatology of stratification, the scheme produces a global three-dimensional map of dissipation which compares well with available microstructure observations and with upper-ocean finestructure mixing estimates. Implemented in the NEMO global ocean model, the scheme improves the representation of deep water-mass transformation and obviates the need for a constant background diffusivity.</p>


2020 ◽  
Vol 13 (7) ◽  
pp. 3319-3336 ◽  
Author(s):  
Hideharu Sasaki ◽  
Shinichiro Kida ◽  
Ryo Furue ◽  
Hidenori Aiki ◽  
Nobumasa Komori ◽  
...  

Abstract. A quasi-global eddying ocean hindcast simulation using a new version of our model, called OFES2 (Ocean General Circulation Model for the Earth Simulator version 2), was conducted to overcome several issues with unrealistic properties in its previous version, OFES. This paper describes the model and the simulated oceanic fields in OFES2 compared with OFES and also observed data. OFES2 includes a sea-ice model and a tidal mixing scheme, is forced by a newly created surface atmospheric dataset called JRA55-do, and simulated the oceanic fields from 1958 to 2016. We found several improvements in OFES2 over OFES: smaller biases in the global sea surface temperature and sea surface salinity as well as the water mass properties in the Indonesian and Arabian seas. The time series of the Niño3.4 and Indian Ocean Dipole (IOD) indexes are somewhat better in OFES2 than in OFES. Unlike the previous version, OFES2 reproduces more realistic anomalously low sea surface temperatures during a positive IOD event. One possible cause of these improvements in El Niño and IOD events is the replacement of the atmospheric dataset. On the other hand, several issues remained unrealistic, such as the pathways of the Kuroshio and Gulf Stream and the unrealistic spreading of salty Mediterranean overflow. Given the worldwide use of the previous version and the improvements presented here, the output from OFES2 will be useful in studying various oceanic phenomena with broad spatiotemporal scales.


Sarsia ◽  
1992 ◽  
Vol 77 (2) ◽  
pp. 157-171 ◽  
Author(s):  
Rune Frederiksen ◽  
Andreas Jensen ◽  
Håkan Westerberg
Keyword(s):  

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