Solution Structure of an Oligodeoxynucleotide Containing the Human n-ras Codon 61 Sequence Refined from 1H NMR Using Molecular Dynamics Restrained by Nuclear Overhauser Effects

Binbin Feng; Michael P. Stone

doi:10.1021/tx00048a002

Solution Structure of an Oligodeoxynucleotide Containing the Human n-ras Codon 61 Sequence Refined from 1H NMR Using Molecular Dynamics Restrained by Nuclear Overhauser Effects

Chemical Research in Toxicology ◽

10.1021/tx00048a002 ◽

1995 ◽

Vol 8 (6) ◽

pp. 821-832 ◽

Cited By ~ 8

Author(s):

Binbin Feng ◽

Michael P. Stone

Keyword(s):

Molecular Dynamics ◽

1H Nmr ◽

Solution Structure ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects ◽

Codon 61

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Solution Structure of an Oligodeoxynucleotide Containing the HumanN-rasCodon 12 Sequence Refined from1H NMR Using Molecular Dynamics Restrained by Nuclear Overhauser Effects

Chemical Research in Toxicology ◽

10.1021/tx9500787 ◽

1996 ◽

Vol 9 (1) ◽

pp. 114-125 ◽

Cited By ~ 3

Author(s):

Irene S. Zegar ◽

Michael P. Stone

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects

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ChemInform Abstract: MOTIONAL AVERAGING OF PROTON NUCLEAR OVERHAUSER EFFECTS IN PROTEINS. PREDICTIONS FROM A MOLECULAR DYNAMICS SIMULATION OF LYSOZYME

Chemischer Informationsdienst ◽

10.1002/chin.198427055 ◽

1984 ◽

Vol 15 (27) ◽

Author(s):

E. T. OLEJNICZAK ◽

C. M. DOBSON ◽

M. KARPLUS ◽

R. M. LEVY

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Dynamics Simulation ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects

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Solution structure of synthetic peptide inhibitor and substrate of cAMP-dependent protein kinase. A study by 2D 1H NMR and molecular dynamics

Journal of Peptide Research ◽

10.1111/j.1399-3011.1997.tb00880.x ◽

2009 ◽

Vol 49 (3) ◽

pp. 210-220 ◽

Cited By ~ 2

Author(s):

ANDRÉ PADILLA ◽

JENNIFER A. HAUER ◽

IGOR TSIGELNY ◽

JOSEPH PARELLO ◽

SUSAN S. TAYLOR

Keyword(s):

Molecular Dynamics ◽

Protein Kinase ◽

Protein Kinase A ◽

1H Nmr ◽

Synthetic Peptide ◽

Solution Structure ◽

Peptide Inhibitor ◽

Dependent Protein Kinase ◽

Dependent Protein ◽

Kinase A

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Solution structure of [d(GTATATAC)]2 via restrained molecular dynamics simulations with nuclear magnetic resonance constraints derived from relaxation matrix analysis of two-dimensional nuclear overhauser effect experiments

Journal of Molecular Biology ◽

10.1016/0022-2836(91)80219-k ◽

1991 ◽

Vol 221 (1) ◽

pp. 271-292 ◽

Cited By ~ 26

Author(s):

Uli Schmitz ◽

David A. Pearlman ◽

Thomas L. James

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Solution Structure ◽

Nuclear Overhauser Effect ◽

Matrix Analysis ◽

Two Dimensional ◽

Overhauser Effect ◽

Nuclear Overhauser ◽

Dynamics Simulations

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Isotope-detected 1H NMR studies of proteins: a general strategy for editing interproton nuclear Overhauser effects by heteronuclear decoupling, with application to phage lambda repressor.

Proceedings of the National Academy of Sciences ◽

10.1073/pnas.83.5.1325 ◽

1986 ◽

Vol 83 (5) ◽

pp. 1325-1329 ◽

Cited By ~ 17

Author(s):

M. A. Weiss ◽

A. G. Redfield ◽

R. H. Griffey

Keyword(s):

1H Nmr ◽

General Strategy ◽

Phage Lambda ◽

Nmr Studies ◽

Lambda Repressor ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects

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Time dependence of nuclear Overhauser effects of duplex DNA from molecular dynamics trajectories

Journal of the American Chemical Society ◽

10.1021/ja00013a044 ◽

1991 ◽

Vol 113 (13) ◽

pp. 5041-5049 ◽

Cited By ~ 29

Author(s):

Jane M. Withka ◽

S. Swaminathan ◽

David L. Beveridge ◽

Philip H. Bolton

Keyword(s):

Molecular Dynamics ◽

Time Dependence ◽

Duplex Dna ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects

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Solution structure of human corticotropin releasing factor by 1H NMR and distance geometry with restrained molecular dynamics

Protein Engineering Design and Selection ◽

10.1093/protein/6.2.149 ◽

1993 ◽

Vol 6 (2) ◽

pp. 149-156 ◽

Cited By ~ 29

Author(s):

Christophe Romier ◽

Jean-Marie Bernassau ◽

Christian Cambillau ◽

Hervé Darbon

Keyword(s):

Molecular Dynamics ◽

1H Nmr ◽

Solution Structure ◽

Distance Geometry ◽

Corticotropin Releasing Factor ◽

Restrained Molecular Dynamics

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The Solution Structure of Yeast tRNAPheas Studied by Nuclear Overhauser Effects in NMR

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.1983.10507434 ◽

1983 ◽

Vol 1 (1) ◽

pp. 183-207 ◽

Cited By ~ 29

Author(s):

C. W. Hilbers ◽

A. Heerschap ◽

C. A.G. Haasnoot ◽

J. A.L.I. Walters

Keyword(s):

Solution Structure ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects

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Investigation of Methanol–Peptide Nuclear Overhauser Effects through Molecular Dynamics Simulations

The Journal of Physical Chemistry B ◽

10.1021/jp211098v ◽

2012 ◽

Vol 116 (6) ◽

pp. 1965-1973 ◽

Cited By ~ 7

Author(s):

J. T. Gerig

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects ◽

Dynamics Simulations

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Relaxation Phenomena and Nuclear Overhauser Effects. Molecular Dynamics and Observation of the 15N Signals

15N-NMR Spectroscopy - NMR Basic Principles and Progress ◽

10.1007/978-3-642-50172-2_2 ◽

1981 ◽

pp. 6-27

Author(s):

Gérard J. Martin ◽

Maryvonne L. Martin ◽

Jean-Paul Gouesnard

Keyword(s):

Molecular Dynamics ◽

Relaxation Phenomena ◽

Nuclear Overhauser ◽

Nuclear Overhauser Effects

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